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Search of human proteins with 84000432
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|84000432 hypothetical protein LOC157769 [Homo sapiens]
(838 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|84000432 hypothetical protein LOC157769 [Homo sapiens] 1679 0.0
gi|239757995 PREDICTED: similar to hCG1747327, partial [Homo sap... 32 1.9
gi|104294888 fms-related tyrosine kinase 4 isoform 1 precursor [... 32 2.4
gi|103472027 fms-related tyrosine kinase 4 isoform 2 precursor [... 32 2.4
gi|148727255 microtubule associated serine/threonine kinase fami... 32 2.4
gi|29294649 dicer1 [Homo sapiens] 31 4.2
gi|29294651 dicer1 [Homo sapiens] 31 4.2
gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens] 31 4.2
gi|164607133 fer-1-like 5 isoform 2 [Homo sapiens] 31 4.2
gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens] 31 5.5
gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens] 30 7.1
gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens] 30 7.1
gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens] 30 7.1
gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens] 30 7.1
gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens] 30 7.1
gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens] 30 7.1
gi|41872374 polo-like kinase 3 [Homo sapiens] 30 7.1
gi|4504035 guanine monophosphate synthetase [Homo sapiens] 30 7.1
gi|171184451 centrosome-associated protein 350 [Homo sapiens] 30 7.1
gi|10835095 serum amyloid A4, constitutive [Homo sapiens] 30 9.3
gi|7662310 FERM, RhoGEF and pleckstrin domain protein 2 [Homo sa... 30 9.3
>gi|84000432 hypothetical protein LOC157769 [Homo sapiens]
Length = 838
Score = 1679 bits (4347), Expect = 0.0
Identities = 838/838 (100%), Positives = 838/838 (100%)
Query: 1 MNIDVEFHIRHNYPWNKLPANVRQSLGNSQREYEKQVVLYSIRNQLRYRNNLVKHVKKDE 60
MNIDVEFHIRHNYPWNKLPANVRQSLGNSQREYEKQVVLYSIRNQLRYRNNLVKHVKKDE
Sbjct: 1 MNIDVEFHIRHNYPWNKLPANVRQSLGNSQREYEKQVVLYSIRNQLRYRNNLVKHVKKDE 60
Query: 61 RRYYEELLKYSRDHLMLYPYHLSDIMVKGLRITPFSYYTGIMEDIMNSEKSYDSLPNFTA 120
RRYYEELLKYSRDHLMLYPYHLSDIMVKGLRITPFSYYTGIMEDIMNSEKSYDSLPNFTA
Sbjct: 61 RRYYEELLKYSRDHLMLYPYHLSDIMVKGLRITPFSYYTGIMEDIMNSEKSYDSLPNFTA 120
Query: 121 ADCLRLLGIGRNQYIDLMNQCRSSKKFFRRKTARDLLPIKPVEIAIEAWWVVQAGYITED 180
ADCLRLLGIGRNQYIDLMNQCRSSKKFFRRKTARDLLPIKPVEIAIEAWWVVQAGYITED
Sbjct: 121 ADCLRLLGIGRNQYIDLMNQCRSSKKFFRRKTARDLLPIKPVEIAIEAWWVVQAGYITED 180
Query: 181 DIKICTLPEKCAVDKIIDSGPQLSGSLDYNVVHSLYNKGFIYLDVPISDDSCIAVPPLEG 240
DIKICTLPEKCAVDKIIDSGPQLSGSLDYNVVHSLYNKGFIYLDVPISDDSCIAVPPLEG
Sbjct: 181 DIKICTLPEKCAVDKIIDSGPQLSGSLDYNVVHSLYNKGFIYLDVPISDDSCIAVPPLEG 240
Query: 241 FVMNRVQGDYFETLLYKIFVSIDEHTNVAELANVLEIDLSLVKNAVSMYCRLGFAHKKGQ 300
FVMNRVQGDYFETLLYKIFVSIDEHTNVAELANVLEIDLSLVKNAVSMYCRLGFAHKKGQ
Sbjct: 241 FVMNRVQGDYFETLLYKIFVSIDEHTNVAELANVLEIDLSLVKNAVSMYCRLGFAHKKGQ 300
Query: 301 VINLDQLHSSWKNVPSVNRLKSTLDPQKMLLSWDGGESRSPVQEASSATDTDTNSQEDPA 360
VINLDQLHSSWKNVPSVNRLKSTLDPQKMLLSWDGGESRSPVQEASSATDTDTNSQEDPA
Sbjct: 301 VINLDQLHSSWKNVPSVNRLKSTLDPQKMLLSWDGGESRSPVQEASSATDTDTNSQEDPA 360
Query: 361 DTASVSSLSLSTGHTKRIAFLFDSTLTAFLMMGNLSPNLKSHAVTMFEVGKLSDESLDSF 420
DTASVSSLSLSTGHTKRIAFLFDSTLTAFLMMGNLSPNLKSHAVTMFEVGKLSDESLDSF
Sbjct: 361 DTASVSSLSLSTGHTKRIAFLFDSTLTAFLMMGNLSPNLKSHAVTMFEVGKLSDESLDSF 420
Query: 421 LIELEKVQSTGEGEAQRYFDHALTLRNTILFLRHNKDLVAQTAQPDQPNYGFPLDLLRCE 480
LIELEKVQSTGEGEAQRYFDHALTLRNTILFLRHNKDLVAQTAQPDQPNYGFPLDLLRCE
Sbjct: 421 LIELEKVQSTGEGEAQRYFDHALTLRNTILFLRHNKDLVAQTAQPDQPNYGFPLDLLRCE 480
Query: 481 SLLGLDPATCSRVLNKNYTLLVSMAPLTNEIRPVSSCTPQHIGPAIPEVSSVWFKLYIYH 540
SLLGLDPATCSRVLNKNYTLLVSMAPLTNEIRPVSSCTPQHIGPAIPEVSSVWFKLYIYH
Sbjct: 481 SLLGLDPATCSRVLNKNYTLLVSMAPLTNEIRPVSSCTPQHIGPAIPEVSSVWFKLYIYH 540
Query: 541 VTGQGPPSLLLSKGTRLRKLPDIFQSYDRLLITSWGHDPGVVPTSNVLTMLNDALTHSAV 600
VTGQGPPSLLLSKGTRLRKLPDIFQSYDRLLITSWGHDPGVVPTSNVLTMLNDALTHSAV
Sbjct: 541 VTGQGPPSLLLSKGTRLRKLPDIFQSYDRLLITSWGHDPGVVPTSNVLTMLNDALTHSAV 600
Query: 601 LIQGHGLHGIGETVHVPFPFDETELQGEFTRVNMGVHKALQILRNRVDLQHLCGYVTMLN 660
LIQGHGLHGIGETVHVPFPFDETELQGEFTRVNMGVHKALQILRNRVDLQHLCGYVTMLN
Sbjct: 601 LIQGHGLHGIGETVHVPFPFDETELQGEFTRVNMGVHKALQILRNRVDLQHLCGYVTMLN 660
Query: 661 ASSQLADRKLSDASDERGEPDLASGSDVNGSTESFEMVIEEATIDSATKQTSGATTEADW 720
ASSQLADRKLSDASDERGEPDLASGSDVNGSTESFEMVIEEATIDSATKQTSGATTEADW
Sbjct: 661 ASSQLADRKLSDASDERGEPDLASGSDVNGSTESFEMVIEEATIDSATKQTSGATTEADW 720
Query: 721 VPLELCFGIPLFSSELNRKVCRKIAAHGLCRKESLQNLLHSSRKLSLQVLNFVHSFQEGA 780
VPLELCFGIPLFSSELNRKVCRKIAAHGLCRKESLQNLLHSSRKLSLQVLNFVHSFQEGA
Sbjct: 721 VPLELCFGIPLFSSELNRKVCRKIAAHGLCRKESLQNLLHSSRKLSLQVLNFVHSFQEGA 780
Query: 781 SILDIHTEPSFSSLLSQSSYADMGVPLPAKNLIFKDGVLSEWSGRSPSSLLIANLHLQ 838
SILDIHTEPSFSSLLSQSSYADMGVPLPAKNLIFKDGVLSEWSGRSPSSLLIANLHLQ
Sbjct: 781 SILDIHTEPSFSSLLSQSSYADMGVPLPAKNLIFKDGVLSEWSGRSPSSLLIANLHLQ 838
>gi|239757995 PREDICTED: similar to hCG1747327, partial [Homo sapiens]
Length = 1064
Score = 32.3 bits (72), Expect = 1.9
Identities = 55/244 (22%), Positives = 83/244 (34%), Gaps = 18/244 (7%)
Query: 338 SRSPVQEASSATDTDTNS-QEDPADTASVSSLSLSTGHTKRIAFLFDSTLTAFLMMGNLS 396
S SP ASS TDT S PA T ST HT + L +T +F N+
Sbjct: 772 SFSPSMSASSDWTTDTESISSAPAIT--------STLHTTAESTLAPTTTNSFTTSANME 823
Query: 397 PNLKSHAVTMFEVGKLSDESLDSFLIELEKVQSTGEGEAQRYFDHALTLRNTILFLRHNK 456
P S AV G+ + S + +E + T + + + ++ +
Sbjct: 824 P--PSTAVATTGTGQSTFTSSTATFLETTTLTPTTDISTESFMTPMISTTPITSSMTLRN 881
Query: 457 DLVAQTAQPDQPNYGFPLDLLRCESLLGLDPATCSRVLNKNYT------LLVSMAPLTNE 510
+ + T +P L L S+L P + V+ T LV+ P T
Sbjct: 882 TMTSMTTAASRPTTTNTLSSL-TSSILSSTPVPSTEVITSQTTNTTSPSTLVTTLPTTIT 940
Query: 511 IRPVSSCTPQHIGPAIPEVSSVWFKLYIYHVTGQGPPSLLLSKGTRLRKLPDIFQSYDRL 570
+S T P S Y +TG + L T I + R
Sbjct: 941 TSTPTSETTYSTSPTSTVTDSTTETTYSTSITGTLSTEISLPATTSSLITKGISMTSTRN 1000
Query: 571 LITS 574
L+T+
Sbjct: 1001 LVTT 1004
>gi|104294888 fms-related tyrosine kinase 4 isoform 1 precursor [Homo
sapiens]
Length = 1363
Score = 32.0 bits (71), Expect = 2.4
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 551 LSKGTRLRKLPDIFQSYDRLLITSWGHDPGVVPT-SNVLTMLNDALTHSAVLIQGHGLHG 609
L GTR+R + R+++ W DP P S ++ +L D L+QG GL
Sbjct: 1128 LRDGTRMRAPELATPAIRRIMLNCWSGDPKARPAFSELVEILGD-------LLQGRGLQE 1180
Query: 610 IGETVHVPFPFDETELQGEFTRVN-MGVHKA 639
E P +E +G F++V+ M +H A
Sbjct: 1181 EEEVCMAPRSSQSSE-EGSFSQVSTMALHIA 1210
>gi|103472027 fms-related tyrosine kinase 4 isoform 2 precursor [Homo
sapiens]
Length = 1298
Score = 32.0 bits (71), Expect = 2.4
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 551 LSKGTRLRKLPDIFQSYDRLLITSWGHDPGVVPT-SNVLTMLNDALTHSAVLIQGHGLHG 609
L GTR+R + R+++ W DP P S ++ +L D L+QG GL
Sbjct: 1128 LRDGTRMRAPELATPAIRRIMLNCWSGDPKARPAFSELVEILGD-------LLQGRGLQE 1180
Query: 610 IGETVHVPFPFDETELQGEFTRVN-MGVHKA 639
E P +E +G F++V+ M +H A
Sbjct: 1181 EEEVCMAPRSSQSSE-EGSFSQVSTMALHIA 1210
>gi|148727255 microtubule associated serine/threonine kinase family
member 4 isoform a [Homo sapiens]
Length = 2434
Score = 32.0 bits (71), Expect = 2.4
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 308 HSSWKNVPSVNRLKSTLDPQKMLLSWDGGESRSPVQEASSATDTDTNSQEDPADTASVSS 367
+S+ + SV++ KST P LSW S +Q+ S++ +DT S + +
Sbjct: 732 NSAEEKEDSVDKTKSTTLPSTETLSWSS--EYSEMQQLSTSNSSDTESNRHKLSSGLLPK 789
Query: 368 LSLST 372
L++ST
Sbjct: 790 LAIST 794
>gi|29294649 dicer1 [Homo sapiens]
Length = 1922
Score = 31.2 bits (69), Expect = 4.2
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 51 NLVKHVKKDERRYYEELLKYSRDHLMLYPYHL--SDIMVKGLRITPFSYYTGIMEDIMNS 108
+L+ K+E Y ++ L+Y ++H+ L S VK + ++PFS E M
Sbjct: 1426 SLMWRAPKEEADYEDDFLEYDQEHIRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPK 1485
Query: 109 EKSYDSLP 116
+ S S+P
Sbjct: 1486 KSSLGSMP 1493
>gi|29294651 dicer1 [Homo sapiens]
Length = 1922
Score = 31.2 bits (69), Expect = 4.2
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 51 NLVKHVKKDERRYYEELLKYSRDHLMLYPYHL--SDIMVKGLRITPFSYYTGIMEDIMNS 108
+L+ K+E Y ++ L+Y ++H+ L S VK + ++PFS E M
Sbjct: 1426 SLMWRAPKEEADYEDDFLEYDQEHIRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPK 1485
Query: 109 EKSYDSLP 116
+ S S+P
Sbjct: 1486 KSSLGSMP 1493
>gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens]
Length = 967
Score = 31.2 bits (69), Expect = 4.2
Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 12/190 (6%)
Query: 338 SRSPVQEASSATDTDTNSQEDPADTASVSSLSLSTGHTKRIAFLFDSTLTAFLMMGNLSP 397
S SP SS+T T+T+S P ++S+++ ++ R F +T T + +P
Sbjct: 545 SHSPPSFTSSSTTTETHSHSTPGFSSSIATSKTTSTSPPRFTFAIATTKTTL----HSTP 600
Query: 398 NLKSHAVTMFEVGKLSDESLDSFLIELEKVQSTGEGEAQRYFDHALTLRNTILFLRHNKD 457
+ A+ + S SL S + +E +T F
Sbjct: 601 RF-TLAIASTKTTSHSTPSLTSLITTIETTSHCTPSLTSSITTSGTISHSTPSF----TS 655
Query: 458 LVAQTAQPDQPNYGFPLDLLRCESLLGLDPATCSRVLNKNYTLLVSMAPLTNEIRPVSSC 517
L+ T FP + E+ P+ S + T ++S + + ++
Sbjct: 656 LITITESTSHSTTSFPSSITTTETTSHSTPSFTSLIAT---TEIISHSTPSYTSSIATTE 712
Query: 518 TPQHIGPAIP 527
TP H P+ P
Sbjct: 713 TPSHSTPSFP 722
>gi|164607133 fer-1-like 5 isoform 2 [Homo sapiens]
Length = 2093
Score = 31.2 bits (69), Expect = 4.2
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 20/171 (11%)
Query: 622 ETELQGEFTRVNMGVHKAL----QILRNRVDLQHLCGYVTMLNASSQLADRKLSDASDER 677
E EL GE R +M QIL R+ L L Y+ ++ D + D DE
Sbjct: 333 EVELIGEKLRTHMQTQTDNPIWNQILTFRIQLPCLSSYIKF-----RVLDCRKKDCPDEI 387
Query: 678 GEPDLASGSDVNGSTESFEMVIEEATIDSATKQTSGATTEADWVPLELCFGIPLFSSELN 737
G L S + ++ + E E + SG ++P CFG +
Sbjct: 388 GTASL-SLNQISSTGEEIEGKQSLEPTSYTPRVYSG------FLP---CFGPSFLTLHGG 437
Query: 738 RKVCRKIAAHGLCRKESLQNLLHSSRKLSLQVLNFVHSFQEGASILDIHTE 788
+K +I G C +S+++ L ++ L+++ + S+Q+ ++I D+ E
Sbjct: 438 KKAPFRIQEEGACIPDSVRDGLAYRGRVFLELITQIKSYQD-STIKDLSHE 487
>gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens]
Length = 170
Score = 30.8 bits (68), Expect = 5.5
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 17/94 (18%)
Query: 638 KALQILRNRVDLQHLCGYV------------TMLNASSQLADRKLSDASDERGEPDLASG 685
KAL+ NR+ LQ G ++ ++SS +D SD+S E E +S
Sbjct: 54 KALKEKENRLLLQQSIGETNVERKAKKKRSKSVTSSSSSSSDSSASDSSSESEETSTSSS 113
Query: 686 SDVNGSTESFEMVIEEATIDSATKQTSGATTEAD 719
S+ + + ES ++ SA+ TS +++++D
Sbjct: 114 SEDSDTDES-----SSSSSSSASSTTSSSSSDSD 142
>gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2852
Score = 30.4 bits (67), Expect = 7.1
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 747 HGLCRKESLQ---NLLHSSRKLSLQVLNFVHSFQEGA 780
HGLC + +L+ SS KL+ V+ FVHS+QE A
Sbjct: 209 HGLCGNNNADPKDDLVTSSGKLTDDVVEFVHSWQEQA 245
>gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2924
Score = 30.4 bits (67), Expect = 7.1
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 747 HGLCRKESLQ---NLLHSSRKLSLQVLNFVHSFQEGA 780
HGLC + +L+ SS KL+ V+ FVHS+QE A
Sbjct: 281 HGLCGNNNADPKDDLVTSSGKLTDDVVEFVHSWQEQA 317
>gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2852
Score = 30.4 bits (67), Expect = 7.1
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 747 HGLCRKESLQ---NLLHSSRKLSLQVLNFVHSFQEGA 780
HGLC + +L+ SS KL+ V+ FVHS+QE A
Sbjct: 209 HGLCGNNNADPKDDLVTSSGKLTDDVVEFVHSWQEQA 245
>gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2924
Score = 30.4 bits (67), Expect = 7.1
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 747 HGLCRKESLQ---NLLHSSRKLSLQVLNFVHSFQEGA 780
HGLC + +L+ SS KL+ V+ FVHS+QE A
Sbjct: 281 HGLCGNNNADPKDDLVTSSGKLTDDVVEFVHSWQEQA 317
>gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2852
Score = 30.4 bits (67), Expect = 7.1
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 747 HGLCRKESLQ---NLLHSSRKLSLQVLNFVHSFQEGA 780
HGLC + +L+ SS KL+ V+ FVHS+QE A
Sbjct: 209 HGLCGNNNADPKDDLVTSSGKLTDDVVEFVHSWQEQA 245
>gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2924
Score = 30.4 bits (67), Expect = 7.1
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 747 HGLCRKESLQ---NLLHSSRKLSLQVLNFVHSFQEGA 780
HGLC + +L+ SS KL+ V+ FVHS+QE A
Sbjct: 281 HGLCGNNNADPKDDLVTSSGKLTDDVVEFVHSWQEQA 317
>gi|41872374 polo-like kinase 3 [Homo sapiens]
Length = 646
Score = 30.4 bits (67), Expect = 7.1
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 186 TLPEKCAVDKIIDSGPQLSGSLDYNVVHSLYNKGFIYLDVPISDDSCIAVPPL 238
+LP + + I+ + P+ S+D + H + KG+ +PIS SC+ VP L
Sbjct: 284 SLPARQLLAAILRASPRDRPSIDQILRHDFFTKGYTPDRLPIS--SCVTVPDL 334
>gi|4504035 guanine monophosphate synthetase [Homo sapiens]
Length = 693
Score = 30.4 bits (67), Expect = 7.1
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 736 LNRKVCRK--IAAH---GLCRKESLQNLLHSSRKLSLQV--LNFVHSFQEGASILDIHTE 788
LNR + ++ IA H G RK Q++ + +KL +QV +N HSF G + L I E
Sbjct: 256 LNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAAHSFYNGTTTLPISDE 315
>gi|171184451 centrosome-associated protein 350 [Homo sapiens]
Length = 3117
Score = 30.4 bits (67), Expect = 7.1
Identities = 17/61 (27%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 10 RHNYPWNKLPANVRQSLGNS-QREYEKQVVLYSIRNQLRYRNNLVKHVKKDERRYYEELL 68
+H Y W+ ++ QS S Q + E ++ +++++LR R ++V +KK++++ +E L
Sbjct: 2026 QHCYSWSDESLSMTQSETTSDQSDIEGRI--RALKDELRKRKSVVNQLKKEQKKRQKERL 2083
Query: 69 K 69
K
Sbjct: 2084 K 2084
>gi|10835095 serum amyloid A4, constitutive [Homo sapiens]
Length = 130
Score = 30.0 bits (66), Expect = 9.3
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 635 GVHKALQILRNRVDLQHLCGYVTMLNASSQLADRKLSDASDERGEPDLASGSD 687
GV A I R+RV LQ L Y N+S+ L D K ++ ++E G SG D
Sbjct: 69 GVWAAKLISRSRVYLQGLIDYYLFGNSSTVLEDSKSNEKAEEWGR----SGKD 117
>gi|7662310 FERM, RhoGEF and pleckstrin domain protein 2 [Homo
sapiens]
Length = 1054
Score = 30.0 bits (66), Expect = 9.3
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 618 FPFDETELQGEFTRVNMGVHKALQILRNRVDLQHLCGYVTMLNASSQLADRKLSDASDER 677
FP D +LQ E+TR ALQ+ R+ ++ + C T +S L ++ D +
Sbjct: 124 FPPDPGQLQEEYTRYLF----ALQLKRDLLEERLTCADTTAALLTSHLLQSEIGDYDETL 179
Query: 678 GEPDLASGSDVNGSTESFEMVIEEATIDSATKQTSGATTEADWVPLELCFGIPLF 732
L + G E ++E K E+D+ LE+ + ++
Sbjct: 180 DREHLKVNEYLPGQQHCLEKILE-----FHQKHVGQTPAESDFQVLEIARKLEMY 229
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,047,503
Number of Sequences: 37866
Number of extensions: 1362509
Number of successful extensions: 3522
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3510
Number of HSP's gapped (non-prelim): 35
length of query: 838
length of database: 18,247,518
effective HSP length: 111
effective length of query: 727
effective length of database: 14,044,392
effective search space: 10210272984
effective search space used: 10210272984
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.