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Search of human proteins with 82617634
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|82617634 cytoplasmic FMR1 interacting protein 2 [Homo
sapiens]
(1253 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116805788 cytoplasmic FMR1 interacting protein 2 [Homo sapiens] 2537 0.0
gi|82617634 cytoplasmic FMR1 interacting protein 2 [Homo sapiens] 2537 0.0
gi|82617630 cytoplasmic FMR1 interacting protein 2 [Homo sapiens] 2537 0.0
gi|24307969 cytoplasmic FMR1 interacting protein 1 isoform a [Ho... 2250 0.0
gi|74271907 cytoplasmic FMR1 interacting protein 1 isoform b [Ho... 1236 0.0
gi|33285015 leucine rich repeat containing 28 [Homo sapiens] 35 0.59
gi|13540580 family with sequence similarity 49, member A [Homo s... 34 0.77
gi|57634534 nucleoporin 205kDa [Homo sapiens] 33 2.2
gi|238859557 regulatory factor X1 [Homo sapiens] 32 2.9
gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens] 32 2.9
gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens] 32 2.9
gi|42734438 hypothetical protein LOC51571 [Homo sapiens] 32 5.0
gi|40255197 RasGEF domain family, member 1C [Homo sapiens] 32 5.0
>gi|116805788 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]
Length = 1253
Score = 2537 bits (6576), Expect = 0.0
Identities = 1253/1253 (100%), Positives = 1253/1253 (100%)
Query: 1 MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI 60
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
Sbjct: 1 MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI 60
Query: 61 EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
Sbjct: 61 EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
Query: 121 KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS 180
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
Sbjct: 121 KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS 180
Query: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD 240
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
Sbjct: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD 240
Query: 241 IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK 300
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
Sbjct: 241 IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK 300
Query: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI 360
QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
Sbjct: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI 360
Query: 361 SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD 420
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
Sbjct: 361 SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD 420
Query: 421 KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY 480
KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
Sbjct: 421 KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY 480
Query: 481 AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG 540
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
Sbjct: 481 AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG 540
Query: 541 GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF 600
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF
Sbjct: 541 GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF 600
Query: 601 FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM 660
FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
Sbjct: 601 FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM 660
Query: 661 EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV 720
EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV
Sbjct: 661 EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV 720
Query: 721 LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD 780
LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
Sbjct: 721 LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD 780
Query: 781 QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL 840
QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL
Sbjct: 781 QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL 840
Query: 841 HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI 900
HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
Sbjct: 841 HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI 900
Query: 901 YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR 960
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
Sbjct: 901 YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR 960
Query: 961 LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD 1020
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
Sbjct: 961 LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD 1020
Query: 1021 LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL 1080
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
Sbjct: 1021 LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL 1080
Query: 1081 TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP 1140
TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP
Sbjct: 1081 TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP 1140
Query: 1141 VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL 1200
VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
Sbjct: 1141 VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL 1200
Query: 1201 KKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC 1253
KKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC
Sbjct: 1201 KKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC 1253
>gi|82617634 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]
Length = 1253
Score = 2537 bits (6576), Expect = 0.0
Identities = 1253/1253 (100%), Positives = 1253/1253 (100%)
Query: 1 MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI 60
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
Sbjct: 1 MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI 60
Query: 61 EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
Sbjct: 61 EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
Query: 121 KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS 180
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
Sbjct: 121 KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS 180
Query: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD 240
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
Sbjct: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD 240
Query: 241 IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK 300
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
Sbjct: 241 IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK 300
Query: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI 360
QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
Sbjct: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI 360
Query: 361 SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD 420
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
Sbjct: 361 SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD 420
Query: 421 KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY 480
KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
Sbjct: 421 KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY 480
Query: 481 AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG 540
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
Sbjct: 481 AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG 540
Query: 541 GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF 600
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF
Sbjct: 541 GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF 600
Query: 601 FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM 660
FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
Sbjct: 601 FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM 660
Query: 661 EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV 720
EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV
Sbjct: 661 EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV 720
Query: 721 LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD 780
LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
Sbjct: 721 LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD 780
Query: 781 QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL 840
QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL
Sbjct: 781 QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL 840
Query: 841 HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI 900
HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
Sbjct: 841 HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI 900
Query: 901 YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR 960
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
Sbjct: 901 YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR 960
Query: 961 LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD 1020
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
Sbjct: 961 LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD 1020
Query: 1021 LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL 1080
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
Sbjct: 1021 LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL 1080
Query: 1081 TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP 1140
TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP
Sbjct: 1081 TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP 1140
Query: 1141 VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL 1200
VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
Sbjct: 1141 VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL 1200
Query: 1201 KKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC 1253
KKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC
Sbjct: 1201 KKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC 1253
>gi|82617630 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]
Length = 1253
Score = 2537 bits (6576), Expect = 0.0
Identities = 1253/1253 (100%), Positives = 1253/1253 (100%)
Query: 1 MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI 60
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
Sbjct: 1 MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI 60
Query: 61 EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
Sbjct: 61 EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
Query: 121 KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS 180
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
Sbjct: 121 KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS 180
Query: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD 240
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
Sbjct: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD 240
Query: 241 IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK 300
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
Sbjct: 241 IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK 300
Query: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI 360
QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
Sbjct: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI 360
Query: 361 SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD 420
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
Sbjct: 361 SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD 420
Query: 421 KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY 480
KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
Sbjct: 421 KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY 480
Query: 481 AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG 540
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
Sbjct: 481 AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG 540
Query: 541 GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF 600
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF
Sbjct: 541 GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF 600
Query: 601 FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM 660
FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
Sbjct: 601 FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM 660
Query: 661 EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV 720
EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV
Sbjct: 661 EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV 720
Query: 721 LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD 780
LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
Sbjct: 721 LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD 780
Query: 781 QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL 840
QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL
Sbjct: 781 QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL 840
Query: 841 HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI 900
HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
Sbjct: 841 HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI 900
Query: 901 YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR 960
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
Sbjct: 901 YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR 960
Query: 961 LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD 1020
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
Sbjct: 961 LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD 1020
Query: 1021 LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL 1080
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
Sbjct: 1021 LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL 1080
Query: 1081 TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP 1140
TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP
Sbjct: 1081 TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP 1140
Query: 1141 VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL 1200
VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
Sbjct: 1141 VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL 1200
Query: 1201 KKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC 1253
KKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC
Sbjct: 1201 KKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC 1253
>gi|24307969 cytoplasmic FMR1 interacting protein 1 isoform a [Homo
sapiens]
Length = 1253
Score = 2250 bits (5830), Expect = 0.0
Identities = 1098/1253 (87%), Positives = 1178/1253 (94%), Gaps = 1/1253 (0%)
Query: 1 MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI 60
M VTLEDALSNVDLLEELPLPDQQPCIEPPPSS++YQ NF+TNFEDRNAFVTGIARYI
Sbjct: 1 MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI 60
Query: 61 EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
EQATVHSSMNEMLEEG EYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
Sbjct: 61 EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT 120
Query: 121 KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS 180
KLM FMYFQR AIERFC EV+RLCHAERRKDFVSEAYL+TLGKFINMFAVLDELKNMKCS
Sbjct: 121 KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS 180
Query: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD 240
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHN+ITQ L QQLEVI GYEELLAD
Sbjct: 181 VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVISGYEELLAD 240
Query: 241 IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK 300
IVN+CVDYYEN+MYLTPSEKHMLLKVMGFGLYLMDG+VSNIYKLDAKKRINLSKIDK+FK
Sbjct: 241 IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK 300
Query: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI 360
QLQVVPLFGDMQIELARYIKTSAHYEENKS+WTCT S SPQYNICEQM+QIR+DH+RFI
Sbjct: 301 QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSGSSPQYNICEQMIQIREDHMRFI 360
Query: 361 SELARYSNSEVVTGSGL-DSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPT 419
SELARYSNSEVVTGSG ++QK+D EYR+LFDLAL+GLQLLS+WSAHVMEVYSWKLVHPT
Sbjct: 361 SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT 420
Query: 420 DKFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTI 479
DK+ NKDCP +AEEYERATRYNYTSEEKFA VEVIAMIKGLQVLMGRMESVFN AIR+T+
Sbjct: 421 DKYSNKDCPDSAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV 480
Query: 480 YAALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPK 539
YAALQDF+QVTLREPLRQA++KKKNV+ SVLQAIRKT+CDWE G EP NDP LRGEKDPK
Sbjct: 481 YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK 540
Query: 540 GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSF 599
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSL+GP +L IE FH++SF
Sbjct: 541 SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF 600
Query: 600 FFTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSM 659
F+THL+N SE LQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKE SM
Sbjct: 601 FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM 660
Query: 660 MEYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGS 719
MEYVLY LDLYNDSA+YALT+F KQFLYDEIEAEVNLCFDQFVYKLADQIFAYYK MAGS
Sbjct: 661 MEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGS 720
Query: 720 VLLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSL 779
+LLDKR R+ECKN G I PPSNRYETLLKQRHVQLLGRSIDLNRLITQR+SAAMYKSL
Sbjct: 721 LLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSL 780
Query: 780 DQAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRIT 839
+ AI RFESEDLTSIVEL+ LLEINR+TH+LL +++TLD FDAMFREANHNVSAPYGRIT
Sbjct: 781 ELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRIT 840
Query: 840 LHVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSH 899
LHVFWELN+DFLPNYCYNGSTNRFVRT +PF+QE QRDK N QP YL+GSK LN+AYS
Sbjct: 841 LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSS 900
Query: 900 IYSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKIC 959
IY SYRNFVGPPHF+ ICRLLGYQGIAVVMEELLK+VKSLLQGTILQYVKTL+EVMPKIC
Sbjct: 901 IYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC 960
Query: 960 RLPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVC 1019
RLPRHEYGSPGILEFFHHQLKDI+EYAELKT FQ+LREVGNAILFCLLIEQ+LS EEVC
Sbjct: 961 RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVC 1020
Query: 1020 DLLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDL 1079
DLLHAAPFQNILPRV++KEGERL+ +MKRLE+KYAPLHLVPLIERLGTPQQIAIAREGDL
Sbjct: 1021 DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL 1080
Query: 1080 LTKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCI 1139
LTKERLCCGLSMFEVILTRIRS+L DPIWRGP P+NGVMHVDECVEFHRLWSAMQFVYCI
Sbjct: 1081 LTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI 1140
Query: 1140 PVGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVP 1199
PVGT+EFT EQCFGDGL+WAGC IIVLLGQQRRF + DFCYHLLKVQ+ DGKDEIIKNVP
Sbjct: 1141 PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVP 1200
Query: 1200 LKKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATT 1252
LKKM +RIRK+QILN+E+ IL+KY+KS + + + VEHVRCFQPPIHQSLA++
Sbjct: 1201 LKKMVERIRKFQILNDEIITILDKYLKSGDGEGTPVEHVRCFQPPIHQSLASS 1253
>gi|74271907 cytoplasmic FMR1 interacting protein 1 isoform b [Homo
sapiens]
Length = 822
Score = 1236 bits (3197), Expect = 0.0
Identities = 598/700 (85%), Positives = 649/700 (92%)
Query: 553 PSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFFFTHLLNISEALQ 612
P QLYMVRTMLESLIADKSGSKKTLRSSL+GP +L IE FH++SFF+THL+N SE LQ
Sbjct: 123 PWIIQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESFFYTHLINFSETLQ 182
Query: 613 QCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMMEYVLYPLDLYND 672
QCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKE SMMEYVLY LDLYND
Sbjct: 183 QCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASMMEYVLYSLDLYND 242
Query: 673 SAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSVLLDKRFRAECKN 732
SA+YALT+F KQFLYDEIEAEVNLCFDQFVYKLADQIFAYYK MAGS+LLDKR R+ECKN
Sbjct: 243 SAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGSLLLDKRLRSECKN 302
Query: 733 YGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDQAISRFESEDLT 792
G I PPSNRYETLLKQRHVQLLGRSIDLNRLITQR+SAAMYKSL+ AI RFESEDLT
Sbjct: 303 QGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSLELAIGRFESEDLT 362
Query: 793 SIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITLHVFWELNFDFLP 852
SIVEL+ LLEINR+TH+LL +++TLD FDAMFREANHNVSAPYGRITLHVFWELN+DFLP
Sbjct: 363 SIVELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRITLHVFWELNYDFLP 422
Query: 853 NYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIYSSYRNFVGPPH 912
NYCYNGSTNRFVRT +PF+QE QRDK N QP YL+GSK LN+AYS IY SYRNFVGPPH
Sbjct: 423 NYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSSIYGSYRNFVGPPH 482
Query: 913 FKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRLPRHEYGSPGIL 972
F+ ICRLLGYQGIAVVMEELLK+VKSLLQGTILQYVKTL+EVMPKICRLPRHEYGSPGIL
Sbjct: 483 FQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKICRLPRHEYGSPGIL 542
Query: 973 EFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDLLHAAPFQNILP 1032
EFFHHQLKDI+EYAELKT FQ+LREVGNAILFCLLIEQ+LS EEVCDLLHAAPFQNILP
Sbjct: 543 EFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVCDLLHAAPFQNILP 602
Query: 1033 RVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMF 1092
RV++KEGERL+ +MKRLE+KYAPLHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMF
Sbjct: 603 RVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMF 662
Query: 1093 EVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIPVGTNEFTAEQCF 1152
EVILTRIRS+L DPIWRGP P+NGVMHVDECVEFHRLWSAMQFVYCIPVGT+EFT EQCF
Sbjct: 663 EVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCIPVGTHEFTVEQCF 722
Query: 1153 GDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLKKMADRIRKYQI 1212
GDGL+WAGC IIVLLGQQRRF + DFCYHLLKVQ+ DGKDEIIKNVPLKKM +RIRK+QI
Sbjct: 723 GDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVPLKKMVERIRKFQI 782
Query: 1213 LNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATT 1252
LN+E+ IL+KY+KS + + + VEHVRCFQPPIHQSLA++
Sbjct: 783 LNDEIITILDKYLKSGDGEGTPVEHVRCFQPPIHQSLASS 822
>gi|33285015 leucine rich repeat containing 28 [Homo sapiens]
Length = 367
Score = 34.7 bits (78), Expect = 0.59
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 66 HSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIY--EKTVEVLEPEVTKLM 123
H + + +EG +Y LY R+ ++P+ + PN VE+Y + V+ + L+
Sbjct: 29 HFPLELLKDEGLQYLERLYMKRNSLTSLPENLAQKLPNLVELYLHSNNIVVVPEAIGSLV 88
Query: 124 KF--MYFQRKAIERFCSEVKRL 143
K + A+E C E+ RL
Sbjct: 89 KLQCLDLSDNALEIVCPEIGRL 110
>gi|13540580 family with sequence similarity 49, member A [Homo
sapiens]
Length = 323
Score = 34.3 bits (77), Expect = 0.77
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 13/99 (13%)
Query: 100 EQPNRVEIYEKTVEVLEPEVTKLMKFMYFQ---RKAIERF-----CSEVKRLCHAERRKD 151
+ PN +++ EK + P V +L +F F KA++ C H ER +
Sbjct: 67 QNPNDIQLQEKAWNAVCPLVVRLKRFYEFSIRLEKALQSLLESLTCPPYTPTQHLEREQA 126
Query: 152 FVSEAYLLTLGKFINMFAVLDELKNMKCSVKNDHSAYKR 190
E + ++ DELK +++ND S Y+R
Sbjct: 127 LAKE-----FAEILHFTLRFDELKMRNPAIQNDFSYYRR 160
>gi|57634534 nucleoporin 205kDa [Homo sapiens]
Length = 2012
Score = 32.7 bits (73), Expect = 2.2
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 173 ELKNMK----CSVKNDHSAYKRAAQFLRKMAD----PQSIQESQNLSMFLANHNRITQCL 224
E KN++ C+VK H L+ MA P ++E + ++ N++ QCL
Sbjct: 1217 EHKNLRGQTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEISTVLQYVVGRNKLLQCL 1276
Query: 225 HQQLEVIPGYEELLADIVNIC 245
H + + + +L+ I+ C
Sbjct: 1277 HAKRHALESWRQLVEIILTAC 1297
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 32.3 bits (72), Expect = 2.9
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 17/62 (27%)
Query: 864 VRTAIPFTQE-------PQRDKPANVQPYYLYGSKPLNIAYS----------HIYSSYRN 906
V+ ++P TQE PQ KP VQP + G +P+++A H+YSS
Sbjct: 237 VQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQVPVPHVYSSQVQ 296
Query: 907 FV 908
+V
Sbjct: 297 YV 298
>gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens]
Length = 1474
Score = 32.3 bits (72), Expect = 2.9
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Query: 340 SPQYNICEQMVQIRDDHIRFISELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQL 399
SP N Q ++ ++ SELAR++ + G S K E+ ++ D L+ L+
Sbjct: 534 SPWVNQVAQKIKSGENAANIASELARHTRGSIYAGDVSSSVKLMEQLLDILDAQLQALRP 593
Query: 400 LSKWSAHVMEVYSWKLVHPTDKFCNKDCPGTAEEYERATR 439
+ + SA ++ +H ++ C E + R
Sbjct: 594 IERESAG----KNYNKMHKRERTCKDYIKAVVETVDNLLR 629
>gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens]
Length = 1469
Score = 32.3 bits (72), Expect = 2.9
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Query: 340 SPQYNICEQMVQIRDDHIRFISELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQL 399
SP N Q ++ ++ SELAR++ + G S K E+ ++ D L+ L+
Sbjct: 529 SPWVNQVAQKIKSGENAANIASELARHTRGSIYAGDVSSSVKLMEQLLDILDAQLQALRP 588
Query: 400 LSKWSAHVMEVYSWKLVHPTDKFCNKDCPGTAEEYERATR 439
+ + SA ++ +H ++ C E + R
Sbjct: 589 IERESAG----KNYNKMHKRERTCKDYIKAVVETVDNLLR 624
>gi|42734438 hypothetical protein LOC51571 [Homo sapiens]
Length = 324
Score = 31.6 bits (70), Expect = 5.0
Identities = 27/135 (20%), Positives = 57/135 (42%), Gaps = 5/135 (3%)
Query: 65 VHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVTKLMK 124
+++ +N +L++ L ++R I + + P ++ EK + P V KL K
Sbjct: 35 IYNQVNVVLKDAEGILEDLQSYRGAGHEIREAI--QHPADEKLQEKAWGAVVPLVGKLKK 92
Query: 125 FMYFQRK---AIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCSV 181
F F ++ A+ + ++ + +A + ++ DELK ++
Sbjct: 93 FYEFSQRLEAALRGLLGALTSTPYSPTQHLEREQALAKQFAEILHFTLRFDELKMTNPAI 152
Query: 182 KNDHSAYKRAAQFLR 196
+ND S Y+R +R
Sbjct: 153 QNDFSYYRRTLSRMR 167
>gi|40255197 RasGEF domain family, member 1C [Homo sapiens]
Length = 466
Score = 31.6 bits (70), Expect = 5.0
Identities = 48/217 (22%), Positives = 84/217 (38%), Gaps = 35/217 (16%)
Query: 137 CSEVKRLCHAERRKDFVSEAY-LLTLGKFINMFAVLDELKNMKCSVKNDHSAYKRAAQF- 194
C K+ A+ + F+ A +G F ++ A++ + S A R A+F
Sbjct: 267 CMPAKKKQRAQVIEFFIDVARECFNIGNFNSLMAIISGMNMSPVSRLKKTWAKVRTAKFF 326
Query: 195 -LRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLADIVNICVDYYENKM 253
L DP + ++ A H +T ++ VIP + L+ DI Y+ N+
Sbjct: 327 ILEHQMDPTGNFCNYRTALRGAAHRSLTAHSSREKIVIPFFSLLIKDI------YFLNE- 379
Query: 254 YLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKR----INLSKIDKFFKQ-------L 302
G L +G+V+ L+ K+ I +++ F+Q L
Sbjct: 380 --------------GCANRLPNGHVNFEKFLELAKQVGEFITWKQVECPFEQDASITHYL 425
Query: 303 QVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSI 339
P+F + + LA Y S + K +W +SSI
Sbjct: 426 YTAPIFSEDGLYLASYESESPENQTEKERWKALRSSI 462
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,396,334
Number of Sequences: 37866
Number of extensions: 2015455
Number of successful extensions: 4532
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4521
Number of HSP's gapped (non-prelim): 16
length of query: 1253
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1139
effective length of database: 13,930,794
effective search space: 15867174366
effective search space used: 15867174366
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.