Search of human proteins with 7705505

Search of human proteins with 7705505

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7705505 transmembrane protein 138 [Homo sapiens]
         (162 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7705505 transmembrane protein 138 [Homo sapiens]                   323   3e-89
gi|189095266 Rh blood group D antigen isoform 2 [Homo sapiens]         28   2.6  
gi|20336225 Rh blood group D antigen isoform 1 [Homo sapiens]          28   2.6  
gi|66346668 Rhesus blood group, CcEe antigens isoform 4 [Homo sa...    27   5.9  
gi|26051223 sperm-associated cation channel 2 isoform 2 [Homo sa...    27   7.7  
gi|26051227 sperm-associated cation channel 2 isoform 4 [Homo sa...    27   7.7  
gi|16876443 sperm-associated cation channel 2 isoform 1 [Homo sa...    27   7.7  

>gi|7705505 transmembrane protein 138 [Homo sapiens]
          Length = 162

 Score =  323 bits (829), Expect = 3e-89
 Identities = 162/162 (100%), Positives = 162/162 (100%)

Query: 1   MLQTSNYSLVLSLQFLLLSYDLFVNSFSELLQKTPVIQLVLFIIQDIAVLFNIIIIFLMF 60
           MLQTSNYSLVLSLQFLLLSYDLFVNSFSELLQKTPVIQLVLFIIQDIAVLFNIIIIFLMF
Sbjct: 1   MLQTSNYSLVLSLQFLLLSYDLFVNSFSELLQKTPVIQLVLFIIQDIAVLFNIIIIFLMF 60

Query: 61  FNTFVFQAGLVNLLFHKFKGTIILTAVYFALSISLHVWVMNLRWKNSNSFIWTDGLQMLF 120
           FNTFVFQAGLVNLLFHKFKGTIILTAVYFALSISLHVWVMNLRWKNSNSFIWTDGLQMLF
Sbjct: 61  FNTFVFQAGLVNLLFHKFKGTIILTAVYFALSISLHVWVMNLRWKNSNSFIWTDGLQMLF 120

Query: 121 VFQRLAAVLYCYFYKRTAVRLGDPHFYQDSLWLRKEFMQVRR 162
           VFQRLAAVLYCYFYKRTAVRLGDPHFYQDSLWLRKEFMQVRR
Sbjct: 121 VFQRLAAVLYCYFYKRTAVRLGDPHFYQDSLWLRKEFMQVRR 162


>gi|189095266 Rh blood group D antigen isoform 2 [Homo sapiens]
          Length = 321

 Score = 28.5 bits (62), Expect = 2.6
 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 10  VLSLQFLLLSYDLFVNSFSELLQKTPVIQLVLFIIQDIAVLFNIIIIFLMFFNTFVFQAG 69
           + S++   +S    + S   +L K  + QLV+ ++ ++  L N+ ++    FNT      
Sbjct: 110 LFSIRLATMSALSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTD----- 164

Query: 70  LVNLLFHKFKGTIILTAVYFALSIS 94
                +H     I + A YF LS++
Sbjct: 165 -----YHMNMMHIYVFAAYFGLSVA 184


>gi|20336225 Rh blood group D antigen isoform 1 [Homo sapiens]
          Length = 417

 Score = 28.5 bits (62), Expect = 2.6
 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 10  VLSLQFLLLSYDLFVNSFSELLQKTPVIQLVLFIIQDIAVLFNIIIIFLMFFNTFVFQAG 69
           + S++   +S    + S   +L K  + QLV+ ++ ++  L N+ ++    FNT      
Sbjct: 110 LFSIRLATMSALSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTD----- 164

Query: 70  LVNLLFHKFKGTIILTAVYFALSIS 94
                +H     I + A YF LS++
Sbjct: 165 -----YHMNMMHIYVFAAYFGLSVA 184


>gi|66346668 Rhesus blood group, CcEe antigens isoform 4 [Homo
           sapiens]
          Length = 267

 Score = 27.3 bits (59), Expect = 5.9
 Identities = 15/61 (24%), Positives = 31/61 (50%)

Query: 10  VLSLQFLLLSYDLFVNSFSELLQKTPVIQLVLFIIQDIAVLFNIIIIFLMFFNTFVFQAG 69
           + S++   +S    + S   +L K  + QLV+ ++ ++  L  + ++    FNT+V  A 
Sbjct: 110 LFSIRLATMSAMSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIFNTYVHSAV 169

Query: 70  L 70
           L
Sbjct: 170 L 170


>gi|26051223 sperm-associated cation channel 2 isoform 2 [Homo
           sapiens]
          Length = 530

 Score = 26.9 bits (58), Expect = 7.7
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 8/68 (11%)

Query: 50  LFNIIIIFLMFFNTFVFQAGL-----VNLLFHKFKGTIILTAVYFALSISLHVWVMNLRW 104
           LF   IIFL+F NT +    +      N      K T+ + A +  L   L +    L+W
Sbjct: 109 LFKNFIIFLVFLNTIILMVEIELLESTNTKLWPLKLTLEVAAWFILLIFILEIL---LKW 165

Query: 105 KNSNSFIW 112
            ++ S  W
Sbjct: 166 LSNFSVFW 173


>gi|26051227 sperm-associated cation channel 2 isoform 4 [Homo
           sapiens]
          Length = 199

 Score = 26.9 bits (58), Expect = 7.7
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 8/68 (11%)

Query: 50  LFNIIIIFLMFFNTFVFQAGL-----VNLLFHKFKGTIILTAVYFALSISLHVWVMNLRW 104
           LF   IIFL+F NT +    +      N      K T+ + A +  L   L +    L+W
Sbjct: 109 LFKNFIIFLVFLNTIILMVEIELLESTNTKLWPLKLTLEVAAWFILLIFILEIL---LKW 165

Query: 105 KNSNSFIW 112
            ++ S  W
Sbjct: 166 LSNFSVFW 173


>gi|16876443 sperm-associated cation channel 2 isoform 1 [Homo
           sapiens]
          Length = 528

 Score = 26.9 bits (58), Expect = 7.7
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 8/68 (11%)

Query: 50  LFNIIIIFLMFFNTFVFQAGL-----VNLLFHKFKGTIILTAVYFALSISLHVWVMNLRW 104
           LF   IIFL+F NT +    +      N      K T+ + A +  L   L +    L+W
Sbjct: 109 LFKNFIIFLVFLNTIILMVEIELLESTNTKLWPLKLTLEVAAWFILLIFILEIL---LKW 165

Query: 105 KNSNSFIW 112
            ++ S  W
Sbjct: 166 LSNFSVFW 173


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.337    0.146    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,822,558
Number of Sequences: 37866
Number of extensions: 162192
Number of successful extensions: 741
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 739
Number of HSP's gapped (non-prelim): 7
length of query: 162
length of database: 18,247,518
effective HSP length: 94
effective length of query: 68
effective length of database: 14,688,114
effective search space: 998791752
effective search space used: 998791752
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.