Search of human proteins with 7657102

Search of human proteins with 7657102

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7657102 FGF receptor activating protein 1 isoform 1 [Homo
sapiens]
         (315 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7657102 FGF receptor activating protein 1 isoform 1 [Homo sap...   665   0.0  
gi|224177563 FGF receptor activating protein 1 isoform 2 [Homo s...   464   e-131
gi|149192845 ubiquitin specific protease 24 [Homo sapiens]             32   0.73 
gi|52353300 olfactory receptor, family 8, subfamily K, member 3 ...    30   2.1  
gi|187761334 hypothetical protein LOC57828 [Homo sapiens]              30   2.8  
gi|58331211 elastase 2B preproprotein [Homo sapiens]                   30   3.6  
gi|62526043 chymotrypsin C preproprotein [Homo sapiens]                29   4.8  
gi|169217160 PREDICTED: similar to hCG1792883 [Homo sapiens]           29   6.2  
gi|169216352 PREDICTED: similar to hCG1792883 [Homo sapiens]           29   6.2  
gi|169216625 PREDICTED: similar to hCG1792883 [Homo sapiens]           29   6.2  
gi|15559207 elastase 2A preproprotein [Homo sapiens]                   29   6.2  
gi|5174667 sarcoma amplified sequence [Homo sapiens]                   29   6.2  

>gi|7657102 FGF receptor activating protein 1 isoform 1 [Homo
           sapiens]
          Length = 315

 Score =  665 bits (1715), Expect = 0.0
 Identities = 315/315 (100%), Positives = 315/315 (100%)

Query: 1   MYQVPLPLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCGATPCR 60
           MYQVPLPLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCGATPCR
Sbjct: 1   MYQVPLPLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCGATPCR 60

Query: 61  MFSAASQPLDPDGTLFRLRFTAMVWWAITFPVFGFFFCIIWSLVFHFEYTVATDCGVPNY 120
           MFSAASQPLDPDGTLFRLRFTAMVWWAITFPVFGFFFCIIWSLVFHFEYTVATDCGVPNY
Sbjct: 61  MFSAASQPLDPDGTLFRLRFTAMVWWAITFPVFGFFFCIIWSLVFHFEYTVATDCGVPNY 120

Query: 121 LPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGL 180
           LPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGL
Sbjct: 121 LPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGL 180

Query: 181 NVVENLALLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTKKHTVSQEDRKS 240
           NVVENLALLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTKKHTVSQEDRKS
Sbjct: 181 NVVENLALLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTKKHTVSQEDRKS 240

Query: 241 YSWKQRLFIINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFG 300
           YSWKQRLFIINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFG
Sbjct: 241 YSWKQRLFIINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFG 300

Query: 301 NKELLITSQPEEKRF 315
           NKELLITSQPEEKRF
Sbjct: 301 NKELLITSQPEEKRF 315


>gi|224177563 FGF receptor activating protein 1 isoform 2 [Homo
           sapiens]
          Length = 307

 Score =  464 bits (1195), Expect = e-131
 Identities = 223/248 (89%), Positives = 229/248 (92%), Gaps = 4/248 (1%)

Query: 68  PLDPDGTLFRLRFTAMVWWAITFPVFGFFFCIIWSLVFHFEYTVATDCGVPNYLPSVSSA 127
           PLD DGTL RLRFT +    +  P+  F FCI+WSL+FHF+ T AT CGVPNYLPSVSSA
Sbjct: 64  PLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCGVPNYLPSVSSA 123

Query: 128 IGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGLNVVENLA 187
           IGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGLNVVENLA
Sbjct: 124 IGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGLNVVENLA 183

Query: 188 LLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTKKHTVSQEDRKSYSWKQRL 247
           LLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTKKHT    DRKSYSWKQRL
Sbjct: 184 LLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTKKHT----DRKSYSWKQRL 239

Query: 248 FIINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLIT 307
           FIINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLIT
Sbjct: 240 FIINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLIT 299

Query: 308 SQPEEKRF 315
           SQPEEKRF
Sbjct: 300 SQPEEKRF 307



 Score =  119 bits (299), Expect = 3e-27
 Identities = 55/55 (100%), Positives = 55/55 (100%)

Query: 1   MYQVPLPLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCG 55
           MYQVPLPLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCG
Sbjct: 58  MYQVPLPLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCG 112


>gi|149192845 ubiquitin specific protease 24 [Homo sapiens]
          Length = 2460

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 39/128 (30%), Positives = 50/128 (39%), Gaps = 19/128 (14%)

Query: 121 LPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGL 180
           L + SSA+GG      V R       A + L A A      S  SP   YR     +  L
Sbjct: 717 LEAASSALGGPTLTHAVTR-------ATKMLTATAMPTVATSVQSP---YR-----STKL 761

Query: 181 NVVENLALLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTKK----HTVSQE 236
            ++E L LL   YV + EDF       +   AS  GH+L   + +  TK        S E
Sbjct: 762 VIIERLLLLAERYVITIEDFYSVPRTILPHGASFHGHLLTLNVTYESTKDTFTVEAHSNE 821

Query: 237 DRKSYSWK 244
              S  WK
Sbjct: 822 TIGSVRWK 829


>gi|52353300 olfactory receptor, family 8, subfamily K, member 3
           [Homo sapiens]
          Length = 312

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 17  LRFTMVALVTVCCPLVA--FLFCILWSLLFHFKETTATHCGATPCRMFSAASQPLDP 71
           L +T++    VC  LVA  +L+C   SLL   K  T + CG      F   S PL P
Sbjct: 130 LLYTVIMSRRVCQVLVAIPYLYCTFISLLVTIKIFTLSFCGYNVISHFYCDSLPLLP 186


>gi|187761334 hypothetical protein LOC57828 [Homo sapiens]
          Length = 1159

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 50   TATHCGATPCRMFSAASQPLDPDGTLFRLRFTAMVWWAITFPVFGFFFCIIWSLV 104
            T+T+C      +      PL P   LF +  +A V+  +   +F   FC++W LV
Sbjct: 1042 TSTYCNYQLTFLLHIHGLPLSPKRALFIIMVSASVFVGLV--IFYIAFCLLWPLV 1094


>gi|58331211 elastase 2B preproprotein [Homo sapiens]
          Length = 269

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 9/69 (13%)

Query: 112 ATDCGVPNYLPSVSSAIGGEVPQRYVWRFCIGL---------HSAPRFLVAFAYWNHYLS 162
           A  CGV  Y P +S  +GGE  +   W + + L         H+    L+A ++      
Sbjct: 14  ALSCGVSTYAPDMSRMLGGEEARPNSWPWQVSLQYSSNGQWYHTCGGSLIANSWVLTAAH 73

Query: 163 CTSPCSCYR 171
           C S    YR
Sbjct: 74  CISSSGIYR 82


>gi|62526043 chymotrypsin C preproprotein [Homo sapiens]
          Length = 268

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 112 ATDCGVPNYLPSVSS-AIGGEVPQRYVWRFCIGL 144
           A+ CGVP++ P++S+  +GGE  + + W + I L
Sbjct: 14  ASSCGVPSFPPNLSARVVGGEDARPHSWPWQISL 47


>gi|169217160 PREDICTED: similar to hCG1792883 [Homo sapiens]
          Length = 124

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 9   DRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCGATPCRMFSAASQP 68
           +RD T++ L+     ++  CC     +FC LW+ ++   E  A   G T         + 
Sbjct: 40  NRDSTILELQ----KVLKTCCAQSMKIFCCLWNFVYKQLEDAAQ--GLTMGGDVE-EHED 92

Query: 69  LDPDGTLFRLRFTAMVWWAITFPVF 93
           L  D T+F+    A V W   FP +
Sbjct: 93  LTADSTIFKF-VEAYVSWIGKFPTY 116


>gi|169216352 PREDICTED: similar to hCG1792883 [Homo sapiens]
          Length = 124

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 9   DRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCGATPCRMFSAASQP 68
           +RD T++ L+     ++  CC     +FC LW+ ++   E  A   G T         + 
Sbjct: 40  NRDSTILELQ----KVLKTCCAQSMKIFCCLWNFVYKQLEDAAQ--GLTMGGDVE-EHED 92

Query: 69  LDPDGTLFRLRFTAMVWWAITFPVF 93
           L  D T+F+    A V W   FP +
Sbjct: 93  LTADSTIFKF-VEAYVSWIGKFPTY 116


>gi|169216625 PREDICTED: similar to hCG1792883 [Homo sapiens]
          Length = 124

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 9   DRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCGATPCRMFSAASQP 68
           +RD T++ L+     ++  CC     +FC LW+ ++   E  A   G T         + 
Sbjct: 40  NRDSTILELQ----KVLKTCCAQSMKIFCCLWNFVYKQLEDAAQ--GLTMGGDVE-EHED 92

Query: 69  LDPDGTLFRLRFTAMVWWAITFPVF 93
           L  D T+F+    A V W   FP +
Sbjct: 93  LTADSTIFKF-VEAYVSWIGKFPTY 116


>gi|15559207 elastase 2A preproprotein [Homo sapiens]
          Length = 269

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 9/69 (13%)

Query: 112 ATDCGVPNYLPSVSSAIGGEVPQRYVWRFCIGL---------HSAPRFLVAFAYWNHYLS 162
           A  CG P Y P V+  +GGE  +   W + + L         H+    L+A ++      
Sbjct: 14  ALSCGDPTYPPYVTRVVGGEEARPNSWPWQVSLQYSSNGKWYHTCGGSLIANSWVLTAAH 73

Query: 163 CTSPCSCYR 171
           C S    YR
Sbjct: 74  CISSSRTYR 82


>gi|5174667 sarcoma amplified sequence [Homo sapiens]
          Length = 210

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 18/92 (19%)

Query: 95  FFFCIIWSLVFHFEYTVATDCGVPNYLPS----------VSSAIGGEVPQRYVWRFCIGL 144
           FF+ II  LVF F++ ++  C   N              +S+    E+ + +    C GL
Sbjct: 76  FFYMIILGLVFIFQFVISCSCLAINRSKQTDVINASWWVMSNKTRDELERSF---DCCGL 132

Query: 145 HSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRL 176
                F +   Y   Y  CT+ C    P C++
Sbjct: 133 -----FNLTTLYQQDYDFCTAICKSQSPTCQM 159


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.332    0.141    0.484 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,025,061
Number of Sequences: 37866
Number of extensions: 504610
Number of successful extensions: 1257
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1249
Number of HSP's gapped (non-prelim): 13
length of query: 315
length of database: 18,247,518
effective HSP length: 102
effective length of query: 213
effective length of database: 14,385,186
effective search space: 3064044618
effective search space used: 3064044618
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.