Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KLK3 Sequence: fasta or formatted (218aa) NCBI GI: 71834855
Description:

prostate specific antigen isoform 4 preproprotein

Referenced in:

Proteins Measured in Common Diagnostic Tests
Prostate
Serine Proteases

Other entries for this name:
alt prot [261aa] prostate specific antigen isoform 1 preproprotein
alt prot [238aa] prostate specific antigen isoform 3 preproprotein
alt prot [220aa] prostate specific antigen isoform 5 preproprotein
alt prot [69aa] prostate specific antigen isoform 6 preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         14           2
 C cysteine            4.6         10           1
 D aspartate           4.1          9           2
 E glutamate           4.6         10           2
 F phenylalanine       1.4          3           1
 G glycine             8.7         19           2
 H histidine           3.2          7           1
 I isoleucine          4.1          9           1
 K lysine              5.0         11           2
 L leucine            10.1         22           2
 M methionine          1.8          4           1
 N asparagine          1.4          3           1
 P proline             7.3         16           1
 Q glutamine           3.7          8           1
 R arginine            3.7          8           1
 S serine              7.3         16           2
 T threonine           6.4         14           2
 V valine             10.6         23           2
 W tryptophan          4.1          9           1
 Y tyrosine            1.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   prostate specific antigen isoform 4 preproprotein [H... 
KLK3                  0.950   prostate specific antigen isoform 1 preproprotein [Ho...
KLK2                  0.752   kallikrein 2, prostatic isoform 1 
KLK3                  0.745   prostate specific antigen isoform 5 preproprotein [H...
KLK3                  0.699   prostate specific antigen isoform 3 preproprotein [H...
KLK1                  0.567   kallikrein 1 preproprotein 
KLK2                  0.519   kallikrein 2, prostatic isoform 2 
KLK13                 0.380   kallikrein 13 precursor 
KLK11                 0.360   kallikrein 11 isoform 1 preproprotein 
KLK11                 0.360   kallikrein 11 isoform 2 precursor 
KLK11                 0.360   kallikrein 11 isoform 1 preproprotein 
KLK5                  0.353   kallikrein-related peptidase 5 preproprotein 
KLK5                  0.353   kallikrein-related peptidase 5 preproprotein 
KLK5                  0.353   kallikrein-related peptidase 5 preproprotein 
KLK14                 0.349   kallikrein 14 preproprotein 
PRSS1                 0.346   protease, serine, 1 preproprotein 
KLK15                 0.342   kallikrein-related peptidase 15 isoform 4 preproprot...
PRSS3                 0.339   mesotrypsin isoform 2 preproprotein 
PRSS3                 0.335   mesotrypsin isoform 1 preproprotein 
KLK9                  0.335   kallikrein-related peptidase 9 
KLK8                  0.333   kallikrein 8 isoform 1 preproprotein 
KLK6                  0.333   kallikrein-related peptidase 6 isoform A preproprote...
KLK6                  0.333   kallikrein-related peptidase 6 isoform A preproprotei...
KLK7                  0.330   stratum corneum chymotryptic enzyme preproprotein [H...
KLK7                  0.330   stratum corneum chymotryptic enzyme preproprotein [Ho...
PRSS2                 0.326   protease, serine, 2 preproprotein 
KLK8                  0.323   kallikrein 8 isoform 2 
KLK4                  0.312   kallikrein-related peptidase 4 preproprotein 
KLK12                 0.301   kallikrein 12 isoform 2 
KLK12                 0.285   kallikrein 12 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press