LTB 35006

Name: LTB	Sequence: fasta or formatted (77aa)		NCBI GI: 6996016
Description: lymphotoxin-beta isoform b		Referenced in: TNF and Related Signals
Other entries for this name: alt prot [244aa] lymphotoxin-beta isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 8 1 C cysteine 1.3 1 1 D aspartate 1.3 1 1 E glutamate 1.3 1 1 F phenylalanine 1.3 1 1 G glycine 15.6 12 2 H histidine 0.0 0 0 I isoleucine 2.6 2 1 K lysine 1.3 1 1 L leucine 19.5 15 3 M methionine 1.3 1 1 N asparagine 0.0 0 0 P proline 5.2 4 1 Q glutamine 9.1 7 1 R arginine 7.8 6 2 S serine 9.1 7 1 T threonine 5.2 4 1 V valine 7.8 6 1 W tryptophan 0.0 0 0 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lymphotoxin-beta isoform b LTB 0.642 lymphotoxin-beta isoform a ICMT 0.024 isoprenylcysteine carboxyl methyltransferase CCDC9 0.008 coiled-coil domain containing 9 PSMB10 0.008 proteasome beta 10 subunit proprotein C14orf109 0.008 hypothetical protein LOC26175 isoform 1 C14orf109 0.008 hypothetical protein LOC26175 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.