Guide to the Human Genome
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Name: HDHD3 Sequence: fasta or formatted (251aa) NCBI GI: 13654294
Description:

haloacid dehalogenase-like hydrolase domain containing 3

Referenced in:

Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         25           2
 C cysteine            1.6          4           1
 D aspartate           6.0         15           1
 E glutamate           5.6         14           1
 F phenylalanine       3.6          9           1
 G glycine             7.6         19           2
 H histidine           5.2         13           1
 I isoleucine          2.4          6           1
 K lysine              2.0          5           1
 L leucine            14.3         36           2
 M methionine          1.2          3           1
 N asparagine          1.2          3           1
 P proline             6.4         16           1
 Q glutamine           5.2         13           1
 R arginine            7.6         19           2
 S serine              4.8         12           1
 T threonine           4.0         10           1
 V valine              7.2         18           2
 W tryptophan          2.0          5           2
 Y tyrosine            2.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   haloacid dehalogenase-like hydrolase domain containi... 
NANP                  0.032   N-acetylneuraminic acid phosphatase 
ACAD10                0.022   acyl-Coenzyme A dehydrogenase family, member 10 isof...
ACAD10                0.022   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACAD10                0.020   acyl-Coenzyme A dehydrogenase family, member 10 iso...
EPHX2                 0.018   epoxide hydrolase 2, cytoplasmic 
HDHD2                 0.018   haloacid dehalogenase-like hydrolase domain containi...
SEC31B                0.012   SEC31 homolog B 
LHPP                  0.010   phospholysine phosphohistidine inorganic pyrophospha...
LRP4                  0.006   low density lipoprotein receptor-related protein 4 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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