Search of human proteins with 6912430

Search of human proteins with 6912430

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6912430 isoprenylcysteine carboxyl methyltransferase [Homo
sapiens]
         (284 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6912430 isoprenylcysteine carboxyl methyltransferase [Homo sa...   584   e-167
gi|4507021 solute carrier family 4, anion exchanger, member 1 [H...    37   0.020
gi|117414150 transmembrane 7 superfamily member 2 [Homo sapiens]       31   1.4  
gi|31083315 G protein-coupled receptor 45 [Homo sapiens]               30   2.4  
gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens]                  30   2.4  
gi|9910392 1-acylglycerol-3-phosphate O-acyltransferase 4 [Homo ...    29   5.4  
gi|5803068 leukocyte immunoglobulin-like receptor, subfamily A (...    28   7.0  

>gi|6912430 isoprenylcysteine carboxyl methyltransferase [Homo
           sapiens]
          Length = 284

 Score =  584 bits (1506), Expect = e-167
 Identities = 284/284 (100%), Positives = 284/284 (100%)

Query: 1   MAGCAARAPPGSEARLSLATFLLGASVLALPLLTRAGLQGRTGLALYVAGLNALLLLLYR 60
           MAGCAARAPPGSEARLSLATFLLGASVLALPLLTRAGLQGRTGLALYVAGLNALLLLLYR
Sbjct: 1   MAGCAARAPPGSEARLSLATFLLGASVLALPLLTRAGLQGRTGLALYVAGLNALLLLLYR 60

Query: 61  PPRYQIAIRACFLGFVFGCGTLLSFSQSSWSHFGWYMCSLSLFHYSEYLVTAVNNPKSLS 120
           PPRYQIAIRACFLGFVFGCGTLLSFSQSSWSHFGWYMCSLSLFHYSEYLVTAVNNPKSLS
Sbjct: 61  PPRYQIAIRACFLGFVFGCGTLLSFSQSSWSHFGWYMCSLSLFHYSEYLVTAVNNPKSLS 120

Query: 121 LDSFLLNHSLEYTVAALSSWLEFTLENIFWPELKQITWLSVTGLLMVVFGECLRKAAMFT 180
           LDSFLLNHSLEYTVAALSSWLEFTLENIFWPELKQITWLSVTGLLMVVFGECLRKAAMFT
Sbjct: 121 LDSFLLNHSLEYTVAALSSWLEFTLENIFWPELKQITWLSVTGLLMVVFGECLRKAAMFT 180

Query: 181 AGSNFNHVVQNEKSDTHTLVTSGVYAWFRHPSYVGWFYWSIGTQVMLCNPICGVSYALTV 240
           AGSNFNHVVQNEKSDTHTLVTSGVYAWFRHPSYVGWFYWSIGTQVMLCNPICGVSYALTV
Sbjct: 181 AGSNFNHVVQNEKSDTHTLVTSGVYAWFRHPSYVGWFYWSIGTQVMLCNPICGVSYALTV 240

Query: 241 WRFFRDRTEEEEISLIHFFGEEYLEYKKRVPTGLPFIKGVKVDL 284
           WRFFRDRTEEEEISLIHFFGEEYLEYKKRVPTGLPFIKGVKVDL
Sbjct: 241 WRFFRDRTEEEEISLIHFFGEEYLEYKKRVPTGLPFIKGVKVDL 284


>gi|4507021 solute carrier family 4, anion exchanger, member 1 [Homo
           sapiens]
          Length = 911

 Score = 37.0 bits (84), Expect = 0.020
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 11/72 (15%)

Query: 3   GCAARAPPGSEARLS--LATFLLGASVLALPLLTRAGLQGRTGLALYVAGLNAL------ 54
           G AA+     E R+S  L   L+G S+L  P+L+R  L    G+ LY+ G+ +L      
Sbjct: 748 GAAAQIQEVKEQRISGLLVAVLVGLSILMEPILSRIPLAVLFGIFLYM-GVTSLSGIQLF 806

Query: 55  --LLLLYRPPRY 64
             +LLL++PP+Y
Sbjct: 807 DRILLLFKPPKY 818


>gi|117414150 transmembrane 7 superfamily member 2 [Homo sapiens]
          Length = 418

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 11/79 (13%)

Query: 199 LVTSGVYAWFRHPSYVGWFYWSIGTQVMLCNPICGVS------YALTVWRFFRDRTEEEE 252
           L+ SG +   RHP+Y+G    ++   +      CGVS      Y L        R   +E
Sbjct: 337 LLVSGWWGMVRHPNYLGDLIMALAWSLP-----CGVSHLLPYFYLLYFTALLVHREARDE 391

Query: 253 ISLIHFFGEEYLEYKKRVP 271
              +  +G  + EY +RVP
Sbjct: 392 RQCLQKYGLAWQEYCRRVP 410


>gi|31083315 G protein-coupled receptor 45 [Homo sapiens]
          Length = 372

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 18/116 (15%)

Query: 15  RLSLATFLLGASVLALPLLTRAGLQGRTGLALYV----AGLNALLLLLYRPPRYQIAIRA 70
           R+SLA  +L        L+T  G  G T + + V    A  +A+ LLL       I +  
Sbjct: 34  RISLAIVML--------LMTVVGFLGNTVVCIIVYQRPAMRSAINLLLATLAFSDIMLSL 85

Query: 71  CFLGFVFGCGTLLSFSQSSWSHFGWYMCSLSLFHYSEYLVTAVNNPKSLSLDSFLL 126
           C + F     T ++     W HFG + C LS   Y  +++  V     +S+D FL+
Sbjct: 86  CCMPF-----TAVTLITVRW-HFGDHFCRLSATLYWFFVLEGVAILLIISVDRFLI 135


>gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens]
          Length = 1261

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 256 IHFFGEEYLEYKKRVPTGLPFI 277
           IH FG E+ +  K+ P G+PFI
Sbjct: 666 IHLFGAEFTQVAKKEPDGIPFI 687


>gi|9910392 1-acylglycerol-3-phosphate O-acyltransferase 4 [Homo
           sapiens]
          Length = 378

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 90  WSHFGW-YMCSLSLFHYSEYLVTAVNNPKSLSLDSFLL 126
           W+   W +  SL L+ + ++LV+ + +  SL+L SF+L
Sbjct: 306 WTLVNWLFWASLVLYPFFQFLVSMIRSGSSLTLASFIL 343


>gi|5803068 leukocyte immunoglobulin-like receptor, subfamily A
           (with TM domain), member 2 isoform b [Homo sapiens]
          Length = 466

 Score = 28.5 bits (62), Expect = 7.0
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 20/86 (23%)

Query: 91  SHFGWYMCSLSLFHYSEYLVTAVNNPKSLSLDSFLLNHSLEYTVAALSSWLEFTLENIFW 150
           +H G Y C  SL   + YL++  ++P  L + + L  H  +YTV                
Sbjct: 388 AHVGTYRCYSSLSS-NPYLLSLPSDPLELVVSASLGQHPQDYTV---------------- 430

Query: 151 PELKQITWLSVTGLLMVVFGECLRKA 176
              + +  + V GL++VV G  L +A
Sbjct: 431 ---ENLIRMGVAGLVLVVLGILLFEA 453


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.139    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,536,905
Number of Sequences: 37866
Number of extensions: 416728
Number of successful extensions: 1079
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1074
Number of HSP's gapped (non-prelim): 9
length of query: 284
length of database: 18,247,518
effective HSP length: 101
effective length of query: 183
effective length of database: 14,423,052
effective search space: 2639418516
effective search space used: 2639418516
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.