Guide to the Human Genome
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Name: YDJC Sequence: fasta or formatted (323aa) NCBI GI: 63054868
Description:

YdjC homolog

Referenced in:

Additional Conserved Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.7         41           2
 C cysteine            3.1         10           1
 D aspartate           4.0         13           2
 E glutamate           7.7         25           2
 F phenylalanine       4.0         13           2
 G glycine            10.5         34           2
 H histidine           3.7         12           1
 I isoleucine          0.6          2           1
 K lysine              0.6          2           1
 L leucine            12.1         39           2
 M methionine          1.5          5           1
 N asparagine          0.6          2           1
 P proline             7.1         23           2
 Q glutamine           2.5          8           1
 R arginine            9.0         29           2
 S serine              5.6         18           2
 T threonine           5.0         16           1
 V valine              7.7         25           2
 W tryptophan          0.9          3           1
 Y tyrosine            0.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   YdjC homolog 
NIT2                  0.011   nitrilase family, member 2 
LOC100290893          0.009   PREDICTED: hypothetical protein XP_002347938 
LOC100288361          0.009   PREDICTED: hypothetical protein XP_002344205 
LOC100288449          0.008   PREDICTED: hypothetical protein 
LOC100288449          0.008   PREDICTED: hypothetical protein XP_002342973 
ARAP1                 0.006   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
TGM7                  0.006   transglutaminase 7 
MTHFD1                0.005   methylenetetrahydrofolate dehydrogenase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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