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Search of human proteins with 61969662
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61969662 double homeobox A [Homo sapiens]
(204 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61969662 double homeobox A [Homo sapiens] 416 e-117
gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo ... 118 3e-27
gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo sapi... 115 2e-26
gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo sapi... 115 2e-26
gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo ... 115 2e-26
gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo sapi... 115 2e-26
gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo sapi... 115 2e-26
gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens] 115 2e-26
gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens] 115 2e-26
gi|194272172 double homeobox, 4 [Homo sapiens] 115 2e-26
gi|194272217 double homeobox, 4-like [Homo sapiens] 115 2e-26
gi|194272216 double homeobox, 4-like [Homo sapiens] 115 2e-26
gi|194272215 double homeobox, 4-like [Homo sapiens] 115 2e-26
gi|194272192 double homeobox, 4-like [Homo sapiens] 115 2e-26
gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo sapi... 113 1e-25
gi|207442670 double homeobox, 5 [Homo sapiens] 106 1e-23
gi|11120736 double homeobox, 1 [Homo sapiens] 106 1e-23
gi|207442678 double homeobox, 3 [Homo sapiens] 106 2e-23
gi|239751129 PREDICTED: hypothetical protein XP_002347726 [Homo ... 105 2e-23
gi|239745620 PREDICTED: hypothetical protein XP_002344158 [Homo ... 105 2e-23
gi|239758001 PREDICTED: similar to facioscapulohumeral muscular ... 101 5e-22
gi|239752515 PREDICTED: similar to double homeobox, 4 [Homo sapi... 98 6e-21
gi|169217788 PREDICTED: similar to putative DUX4 protein [Homo s... 97 9e-21
gi|89062404 PREDICTED: similar to putative DUX4 protein [Homo sa... 97 9e-21
gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo sapi... 97 1e-20
gi|239758067 PREDICTED: similar to facioscapulohumeral muscular ... 96 3e-20
gi|239752536 PREDICTED: hypothetical protein XP_002346688 [Homo ... 96 3e-20
gi|126116581 retina and anterior neural fold homeobox [Homo sapi... 73 2e-13
gi|14249388 retina and anterior neural fold homeobox 2 [Homo sap... 73 2e-13
gi|27436936 diencephalon/mesencephalon homeobox 1 isoform a [Hom... 70 1e-12
>gi|61969662 double homeobox A [Homo sapiens]
Length = 204
Score = 416 bits (1068), Expect = e-117
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MAEDTYSHKMVKTNHRRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQ 60
MAEDTYSHKMVKTNHRRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQ
Sbjct: 1 MAEDTYSHKMVKTNHRRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQ 60
Query: 61 IWFQNRRARHGFQKRPEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAF 120
IWFQNRRARHGFQKRPEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAF
Sbjct: 61 IWFQNRRARHGFQKRPEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAF 120
Query: 121 MKNPYPGIDSREELAKEIGVPESRVQIWFQNRRSRLLLQRKREPVASLEQEEQGKIPEGL 180
MKNPYPGIDSREELAKEIGVPESRVQIWFQNRRSRLLLQRKREPVASLEQEEQGKIPEGL
Sbjct: 121 MKNPYPGIDSREELAKEIGVPESRVQIWFQNRRSRLLLQRKREPVASLEQEEQGKIPEGL 180
Query: 181 QGAEDTQNGTNFTSDSHFSGARTW 204
QGAEDTQNGTNFTSDSHFSGARTW
Sbjct: 181 QGAEDTQNGTNFTSDSHFSGARTW 204
>gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo
sapiens]
Length = 381
Score = 118 bits (296), Expect = 3e-27
Identities = 68/163 (41%), Positives = 93/163 (57%), Gaps = 11/163 (6%)
Query: 2 AEDTYSHKMVKTNHRRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQI 61
A+ +S + RR R +T Q ++L F + PYPG AT+++LA I E R+QI
Sbjct: 144 AQQIHSPLTSRGRGRRRRLVWTPSQSEVLRACFERNPYPGIATRERLAQAIGIPEPRVQI 203
Query: 62 WFQNRRARHGFQKRPEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFM 121
WFQN R+R Q R E+ + +E RR RT + SQ L++AF
Sbjct: 204 WFQNERSRQLRQHRRESRPWPGRRGL-----------QEGRRKRTAVTGSQTALLLRAFE 252
Query: 122 KNPYPGIDSREELAKEIGVPESRVQIWFQNRRSRLLLQRKREP 164
K+ +PGI +REELA+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 253 KDRFPGIAAREELARETGLPESRIQIWFQNRRARHPGQGGRAP 295
>gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 115 bits (289), Expect = 2e-26
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PYPG AT+++LA I E R+QIWFQN R+R Q R
Sbjct: 81 RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHR 140
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
E S G+ P E RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 141 RE-----SRPWPGRRGPP------EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 190 RETGLPESRIQIWFQNRRARHPGQGGRAP 218
>gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 115 bits (289), Expect = 2e-26
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PYPG AT+++LA I E R+QIWFQN R+R Q R
Sbjct: 81 RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHR 140
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
E S G+ P E RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 141 RE-----SRPWPGRRGPP------EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 190 RETGLPESRIQIWFQNRRARHPGQGGRAP 218
>gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo
sapiens]
Length = 483
Score = 115 bits (289), Expect = 2e-26
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PYPG AT+++LA I E R+QIWFQN R+R Q R
Sbjct: 81 RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHR 140
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
E S G+ P E RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 141 RE-----SRPWPGRRGPP------EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 190 RETGLPESRIQIWFQNRRARHPGQGGRAP 218
>gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 115 bits (289), Expect = 2e-26
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PYPG AT+++LA I E R+QIWFQN R+R Q R
Sbjct: 81 RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHR 140
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
E S G+ P E RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 141 RE-----SRPWPGRRGPP------EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 190 RETGLPESRIQIWFQNRRARHPGQGGRAP 218
>gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 115 bits (289), Expect = 2e-26
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PYPG AT+++LA I E R+QIWFQN R+R Q R
Sbjct: 81 RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHR 140
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
E S G+ P E RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 141 RE-----SRPWPGRRGPP------EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 190 RETGLPESRIQIWFQNRRARHPGQGGRAP 218
>gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 115 bits (289), Expect = 2e-26
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PYPG AT+++LA I E R+QIWFQN R+R Q R
Sbjct: 81 RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHR 140
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
E S G+ P E RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 141 RE-----SRPWPGRRGPP------EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 190 RETGLPESRIQIWFQNRRARHPGQGGRAP 218
>gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 483
Score = 115 bits (289), Expect = 2e-26
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PYPG AT+++LA I E R+QIWFQN R+R Q R
Sbjct: 81 RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHR 140
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
E S G+ P E RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 141 RE-----SRPWPGRRGPP------EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 190 RETGLPESRIQIWFQNRRARHPGQGGRAP 218
>gi|194272172 double homeobox, 4 [Homo sapiens]
Length = 485
Score = 115 bits (289), Expect = 2e-26
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PYPG AT+++LA I E R+QIWFQN R+R Q R
Sbjct: 81 RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHR 140
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
E S G+ P E RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 141 RE-----SRPWPGRRGPP------EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 190 RETGLPESRIQIWFQNRRARHPGQGGRAP 218
>gi|194272217 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 115 bits (289), Expect = 2e-26
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PYPG AT+++LA I E R+QIWFQN R+R Q R
Sbjct: 81 RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHR 140
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
E S G+ P E RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 141 RE-----SRPWPGRRGPP------EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 190 RETGLPESRIQIWFQNRRARHPGQGGRAP 218
>gi|194272216 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 115 bits (289), Expect = 2e-26
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PYPG AT+++LA I E R+QIWFQN R+R Q R
Sbjct: 81 RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHR 140
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
E S G+ P E RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 141 RE-----SRPWPGRRGPP------EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 190 RETGLPESRIQIWFQNRRARHPGQGGRAP 218
>gi|194272215 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 115 bits (289), Expect = 2e-26
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PYPG AT+++LA I E R+QIWFQN R+R Q R
Sbjct: 81 RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHR 140
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
E S G+ P E RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 141 RE-----SRPWPGRRGPP------EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 190 RETGLPESRIQIWFQNRRARHPGQGGRAP 218
>gi|194272192 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 115 bits (289), Expect = 2e-26
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PYPG AT+++LA I E R+QIWFQN R+R Q R
Sbjct: 81 RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHR 140
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
E S G+ P E RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 141 RE-----SRPWPGRRGPP------EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 190 RETGLPESRIQIWFQNRRARHPGQGGRAP 218
>gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 113 bits (283), Expect = 1e-25
Identities = 68/149 (45%), Positives = 87/149 (58%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PYPG AT+++LA I E R+QIWFQN R+R Q R
Sbjct: 81 RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHR 140
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
E S G+ P E RR RT + Q L++AF K+ +PGI +REELA
Sbjct: 141 RE-----SRPWPGRRGPP------EGRRKRTAVTGFQTALLLRAFEKDRFPGIAAREELA 189
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 190 RETGLPESRIQIWFQNRRARHPGQGGRAP 218
>gi|207442670 double homeobox, 5 [Homo sapiens]
Length = 197
Score = 106 bits (265), Expect = 1e-23
Identities = 64/149 (42%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR T Q L F + YPG ATK++LA I+ E R+QIWFQN R+
Sbjct: 47 RRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNERSCQ----- 101
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
L + Q + PG ++ RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 102 -----LRQHRRQSRPWPGRR-DPQKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELA 155
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 156 RETGLPESRIQIWFQNRRARHRGQSGRAP 184
>gi|11120736 double homeobox, 1 [Homo sapiens]
Length = 170
Score = 106 bits (265), Expect = 1e-23
Identities = 64/149 (42%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR T Q L F + YPG ATK++LA I+ E R+QIWFQN R+
Sbjct: 20 RRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNERSCQ----- 74
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
L + Q + PG ++ RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 75 -----LRQHRRQSRPWPGRR-DPQKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELA 128
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+QIWFQNRR+R Q R P
Sbjct: 129 RETGLPESRIQIWFQNRRARHRGQSGRAP 157
>gi|207442678 double homeobox, 3 [Homo sapiens]
Length = 197
Score = 106 bits (264), Expect = 2e-23
Identities = 63/149 (42%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR T Q L F + YPG ATK++LA I+ E R+QIWFQN R+
Sbjct: 47 RRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQ----- 101
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
L + Q + PG ++ RR RT + SQ L++AF K+ +PGI +REELA
Sbjct: 102 -----LRQHRRQSRPWPGRR-DPQKGRRKRTAITGSQTALLLRAFEKDRFPGIPAREELA 155
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E G+PESR+Q+WFQNRR+R Q R P
Sbjct: 156 RETGLPESRIQLWFQNRRARHWGQSGRAP 184
>gi|239751129 PREDICTED: hypothetical protein XP_002347726 [Homo
sapiens]
Length = 345
Score = 105 bits (263), Expect = 2e-23
Identities = 60/170 (35%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Query: 17 RCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKRP 76
R R ++ + Q IL + F P+P A +++LA EI ES IQ+WF+N R + Q++
Sbjct: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK---QRKL 73
Query: 77 EAETL-ESSQSQGQDQPG---VEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSRE 132
+ + E Q+QG DQ E+ +EAR+ +T + +Q + L++AF +NP+P I +R+
Sbjct: 74 DYKCFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRK 133
Query: 133 ELAKEIGVPESRVQIWFQNRRSRLLLQRKREPVASLEQEEQGKIPEGLQG 182
+LA++ G+ ESR+Q+WFQ +RS L + + EP+ +L ++ + P+ G
Sbjct: 134 KLAEQTGLQESRIQMWFQKQRSLYLKKSRMEPM-NLLVDDPNERPDATVG 182
Score = 56.6 bits (135), Expect = 1e-08
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 99 REARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELAKEIGVPESRVQIWFQNRRSRLLL 158
+E R R Y+ SQ L F +P+P +RE+LAKEIGVPES +Q+WF+N R +
Sbjct: 13 KEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK--- 69
Query: 159 QRKREPVASLEQEE 172
QRK + E+++
Sbjct: 70 QRKLDYKCFSEKDQ 83
Score = 49.3 bits (116), Expect = 2e-06
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
R+ +T T Q L+ F + P+P AT++KLA + +ESRIQ+WFQ +R+ + + R
Sbjct: 103 RQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYLKKSR 162
Query: 76 PEAETL 81
E L
Sbjct: 163 MEPMNL 168
>gi|239745620 PREDICTED: hypothetical protein XP_002344158 [Homo
sapiens]
Length = 345
Score = 105 bits (263), Expect = 2e-23
Identities = 60/170 (35%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Query: 17 RCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKRP 76
R R ++ + Q IL + F P+P A +++LA EI ES IQ+WF+N R + Q++
Sbjct: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK---QRKL 73
Query: 77 EAETL-ESSQSQGQDQPG---VEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSRE 132
+ + E Q+QG DQ E+ +EAR+ +T + +Q + L++AF +NP+P I +R+
Sbjct: 74 DYKCFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRK 133
Query: 133 ELAKEIGVPESRVQIWFQNRRSRLLLQRKREPVASLEQEEQGKIPEGLQG 182
+LA++ G+ ESR+Q+WFQ +RS L + + EP+ +L ++ + P+ G
Sbjct: 134 KLAEQTGLQESRIQMWFQKQRSLYLKKSRMEPM-NLLVDDPNERPDATVG 182
Score = 56.6 bits (135), Expect = 1e-08
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 99 REARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELAKEIGVPESRVQIWFQNRRSRLLL 158
+E R R Y+ SQ L F +P+P +RE+LAKEIGVPES +Q+WF+N R +
Sbjct: 13 KEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK--- 69
Query: 159 QRKREPVASLEQEE 172
QRK + E+++
Sbjct: 70 QRKLDYKCFSEKDQ 83
Score = 49.3 bits (116), Expect = 2e-06
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
R+ +T T Q L+ F + P+P AT++KLA + +ESRIQ+WFQ +R+ + + R
Sbjct: 103 RQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYLKKSR 162
Query: 76 PEAETL 81
E L
Sbjct: 163 MEPMNL 168
>gi|239758001 PREDICTED: similar to facioscapulohumeral muscular
dystrophy [Homo sapiens]
Length = 300
Score = 101 bits (251), Expect = 5e-22
Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PY G T+++LA I E R+QIWFQN R+
Sbjct: 114 RRRRIVWTPSQREALRACFERNPYLGITTREQLAQAIGILEPRVQIWFQNERSSQ----- 168
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
L + + + PG E RR +TT + SQ ++AF K+ +PGI ++EELA
Sbjct: 169 -----LRQHRQKSRPWPG-RHGPPEGRRKQTTVTGSQTALFLRAFEKDRFPGIAAKEELA 222
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E +PESR+QIWFQNRR+R Q R P
Sbjct: 223 RETVLPESRIQIWFQNRRARHPGQAGRAP 251
>gi|239752515 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 479
Score = 97.8 bits (242), Expect = 6e-21
Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 17 RCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKRP 76
R R +T Q L + + PY G AT+++LA I E R+QIWFQN R+R Q R
Sbjct: 78 RRRLVWTPSQSXALQACYERNPYLGIATRERLAQAIVILEPRVQIWFQNERSRQLRQHRR 137
Query: 77 EAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELAK 136
++ + +E + RT + S+ + L++AF K+ + GI +REELA+
Sbjct: 138 DSRPWPGRRGL-----------KEVWQKRTAVTGSRTYLLLRAFEKDRFTGIATREELAR 186
Query: 137 EIGVPESRVQIWFQNRRSRLLLQRKREP 164
E G PESR+QIWFQNRR+R Q R P
Sbjct: 187 ETGTPESRIQIWFQNRRARHPGQAGRVP 214
>gi|169217788 PREDICTED: similar to putative DUX4 protein [Homo
sapiens]
Length = 422
Score = 97.1 bits (240), Expect = 9e-21
Identities = 63/161 (39%), Positives = 85/161 (52%), Gaps = 13/161 (8%)
Query: 6 YSHKMVKTNHRRCRTK--FTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWF 63
YS V++ R R + +T + + L F PYPG T +LA I E R+QIWF
Sbjct: 8 YSTLPVESQGRGSRRRLIWTPSKSEALRACFEWNPYPGITTGGRLAQAIGISEPRVQIWF 67
Query: 64 QNRRARHGFQKRPEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKN 123
QN R+ L Q + PG ++E RR T + SQ ++AF K+
Sbjct: 68 QNERSCQ----------LMQDQRESWPWPG-RCGTQEGRRKPTAVTGSQTALYLQAFEKD 116
Query: 124 PYPGIDSREELAKEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+P I +REELA+E G+PESR +IWFQNRR+R Q REP
Sbjct: 117 RFPDIAAREELARETGLPESRSEIWFQNRRARHPGQAGREP 157
>gi|89062404 PREDICTED: similar to putative DUX4 protein [Homo
sapiens]
Length = 422
Score = 97.1 bits (240), Expect = 9e-21
Identities = 63/161 (39%), Positives = 85/161 (52%), Gaps = 13/161 (8%)
Query: 6 YSHKMVKTNHRRCRTK--FTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWF 63
YS V++ R R + +T + + L F PYPG T +LA I E R+QIWF
Sbjct: 8 YSTLPVESQGRGSRRRLIWTPSKSEALRACFEWNPYPGITTGGRLAQAIGISEPRVQIWF 67
Query: 64 QNRRARHGFQKRPEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKN 123
QN R+ L Q + PG ++E RR T + SQ ++AF K+
Sbjct: 68 QNERSCQ----------LMQDQRESWPWPG-RCGTQEGRRKPTAVTGSQTALYLQAFEKD 116
Query: 124 PYPGIDSREELAKEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+P I +REELA+E G+PESR +IWFQNRR+R Q REP
Sbjct: 117 RFPDIAAREELARETGLPESRSEIWFQNRRARHPGQAGREP 157
>gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 422
Score = 96.7 bits (239), Expect = 1e-20
Identities = 59/153 (38%), Positives = 83/153 (54%), Gaps = 19/153 (12%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRAR----HG 71
RR R ++ + + L + Q PY G AT+++L I ESR+QI FQN R+R H
Sbjct: 20 RRRRLVWSPXESQALGASVEQNPYLGIATRERLTRAIVIPESRVQICFQNERSRQLRQHR 79
Query: 72 FQKRPEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSR 131
++ RP +E RR RT + SQ L++AF K+ +PGI +R
Sbjct: 80 WESRPRPRRCAP---------------QEGRRKRTAVTGSQTTLLLRAFEKDRFPGIATR 124
Query: 132 EELAKEIGVPESRVQIWFQNRRSRLLLQRKREP 164
EELA+E G+P SR+Q+WF NRR+R Q R P
Sbjct: 125 EELARETGLPASRIQMWFPNRRARHPGQAARAP 157
>gi|239758067 PREDICTED: similar to facioscapulohumeral muscular
dystrophy [Homo sapiens]
Length = 468
Score = 95.5 bits (236), Expect = 3e-20
Identities = 58/149 (38%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PY G T+++LA I E R+ IWFQN R+
Sbjct: 114 RRRRIVWTPSQREALRACFERNPYLGITTREQLAQAIGILEPRVPIWFQNERSSQ----- 168
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
L + + + PG E R RT + SQ ++AF K+ +PGI ++EELA
Sbjct: 169 -----LRQHRRKSRPWPG-RHGPPEGRGKRTAVTGSQTALFLRAFEKDRFPGIAAKEELA 222
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E +PESR+QIWFQNRR+R Q R P
Sbjct: 223 RETVLPESRIQIWFQNRRARHPGQAGRAP 251
>gi|239752536 PREDICTED: hypothetical protein XP_002346688 [Homo
sapiens]
Length = 236
Score = 95.5 bits (236), Expect = 3e-20
Identities = 58/149 (38%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR R +T Q + L F + PY G T+++LA I E R+ IWFQN R+
Sbjct: 58 RRRRIVWTPSQREALRACFERNPYLGITTREQLAQAIGILEPRVPIWFQNERSSQ----- 112
Query: 76 PEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELA 135
L + + + PG E R RT + SQ ++AF K+ +PGI ++EELA
Sbjct: 113 -----LRQHRRKSRPWPG-RHGPPEGRGKRTAVTGSQTALFLRAFEKDRFPGIAAKEELA 166
Query: 136 KEIGVPESRVQIWFQNRRSRLLLQRKREP 164
+E +PESR+QIWFQNRR+R Q R P
Sbjct: 167 RETVLPESRIQIWFQNRRARHPGQAGRAP 195
>gi|126116581 retina and anterior neural fold homeobox [Homo
sapiens]
Length = 346
Score = 72.8 bits (177), Expect = 2e-13
Identities = 37/78 (47%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 95 EFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELAKEIGVPESRVQIWFQNRRS 154
E ++ RR RTT++ QLH L +AF K+ YP + SREELA ++ +PE RVQ+WFQNRR+
Sbjct: 130 EQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRA 189
Query: 155 RLLLQRKREPVASLEQEE 172
+ Q K E V+S++ ++
Sbjct: 190 KWRRQEKLE-VSSMKLQD 206
Score = 63.2 bits (152), Expect = 2e-10
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 12 KTNHRRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHG 71
K HRR RT FT QL L F + YP ++++LA ++N E R+Q+WFQNRRA+
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 192
Query: 72 FQKRPEAETLESSQSQGQDQPGVEF 96
Q E LE S + QD P + F
Sbjct: 193 RQ-----EKLEVSSMKLQDSPLLSF 212
>gi|14249388 retina and anterior neural fold homeobox 2 [Homo
sapiens]
Length = 184
Score = 72.8 bits (177), Expect = 2e-13
Identities = 35/72 (48%), Positives = 49/72 (68%)
Query: 92 PGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELAKEIGVPESRVQIWFQN 151
PG E ++ RR RTT++ QLH L +AF + YP + SREELA ++ +PE RVQ+WFQN
Sbjct: 18 PGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQN 77
Query: 152 RRSRLLLQRKRE 163
RR++ Q + E
Sbjct: 78 RRAKWRRQERLE 89
Score = 59.3 bits (142), Expect = 2e-09
Identities = 31/85 (36%), Positives = 48/85 (56%)
Query: 12 KTNHRRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHG 71
K HRR RT FT QL L F YP ++++LA +++ E R+Q+WFQNRRA+
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 72 FQKRPEAETLESSQSQGQDQPGVEF 96
Q+R E+ + + + + P + F
Sbjct: 84 RQERLESGSGAVAAPRLPEAPALPF 108
>gi|27436936 diencephalon/mesencephalon homeobox 1 isoform a [Homo
sapiens]
Length = 377
Score = 70.1 bits (170), Expect = 1e-12
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 66 RRARHGFQKRPEAETLESSQSQGQDQPGVEF--QSREARRCRTTYSASQLHTLIKAFMKN 123
++A+H RP L ++ + Q R+ RR RT ++A QL L K F K
Sbjct: 29 QQAQHAPDYRPSVHALTLAERLADIILEARYGSQHRKQRRSRTAFTAQQLEALEKTFQKT 88
Query: 124 PYPGIDSREELAKEIGVPESRVQIWFQNRRSRLLLQRKREPVASLEQEEQGKIPEGLQG 182
YP + RE LA +PE+RVQ+WF+NRR++ RK++ EQ ++ K EG G
Sbjct: 89 HYPDVVMRERLAMCTNLPEARVQVWFKNRRAKF---RKKQRSLQKEQLQKQKEAEGSHG 144
Score = 60.5 bits (145), Expect = 1e-09
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
RR RT FT +QL+ L TF + YP +++LA+ N E+R+Q+WF+NRRA+ F+K+
Sbjct: 67 RRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK--FRKK 124
Query: 76 PEAETLESSQSQ 87
+ E Q Q
Sbjct: 125 QRSLQKEQLQKQ 136
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,143,702
Number of Sequences: 37866
Number of extensions: 355216
Number of successful extensions: 1809
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1115
Number of HSP's gapped (non-prelim): 641
length of query: 204
length of database: 18,247,518
effective HSP length: 97
effective length of query: 107
effective length of database: 14,574,516
effective search space: 1559473212
effective search space used: 1559473212
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.