Search of human proteins with 58331216

Search of human proteins with 58331216

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|58331216 ABO blood group (alpha
1-3-N-acetylgalactosaminyltransferase, alpha
1-3-galactosyltransferase) [Homo sapiens]
         (354 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|58331216 ABO blood group (alpha 1-3-N-acetylgalactosaminyltra...   728   0.0  
gi|32484985 globoside alpha-1,3-N-acetylgalactosaminyltransferas...   292   4e-79
gi|122937275 alpha 1,3-galactosyltransferase 2 [Homo sapiens]         229   2e-60
gi|134288859 glycosyltransferase 6 domain containing 1 [Homo sap...   156   2e-38
gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo ...    29   5.6  
gi|189083844 cathepsin C isoform a preproprotein [Homo sapiens]        28   9.5  

>gi|58331216 ABO blood group (alpha
           1-3-N-acetylgalactosaminyltransferase, alpha
           1-3-galactosyltransferase) [Homo sapiens]
          Length = 354

 Score =  728 bits (1879), Expect = 0.0
 Identities = 354/354 (100%), Positives = 354/354 (100%)

Query: 1   MAEVLRTLAGKPKCHALRPMILFLIMLVLVLFGYGVLSPRSLMPGSLERGFCMAVREPDH 60
           MAEVLRTLAGKPKCHALRPMILFLIMLVLVLFGYGVLSPRSLMPGSLERGFCMAVREPDH
Sbjct: 1   MAEVLRTLAGKPKCHALRPMILFLIMLVLVLFGYGVLSPRSLMPGSLERGFCMAVREPDH 60

Query: 61  LQRVSLPRMVYPQPKVLTPCRKDVLVVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLTV 120
           LQRVSLPRMVYPQPKVLTPCRKDVLVVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLTV
Sbjct: 61  LQRVSLPRMVYPQPKVLTPCRKDVLVVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLTV 120

Query: 121 FAIKKYVAFLKLFLETAEKHFMVGHRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVRAYKR 180
           FAIKKYVAFLKLFLETAEKHFMVGHRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVRAYKR
Sbjct: 121 FAIKKYVAFLKLFLETAEKHFMVGHRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVRAYKR 180

Query: 181 WQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHVGVEILTPLFGTLHPGFYGSS 240
           WQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHVGVEILTPLFGTLHPGFYGSS
Sbjct: 181 WQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHVGVEILTPLFGTLHPGFYGSS 240

Query: 241 REAFTYERRPQSQAYIPKDEGDFYYLGGFFGGSVQEVQRLTRACHQAMMVDQANGIEAVW 300
           REAFTYERRPQSQAYIPKDEGDFYYLGGFFGGSVQEVQRLTRACHQAMMVDQANGIEAVW
Sbjct: 241 REAFTYERRPQSQAYIPKDEGDFYYLGGFFGGSVQEVQRLTRACHQAMMVDQANGIEAVW 300

Query: 301 HDESHLNKYLLRHKPTKVLSPEYLWDQQLLGWPAVLRKLRFTAVPKNHQAVRNP 354
           HDESHLNKYLLRHKPTKVLSPEYLWDQQLLGWPAVLRKLRFTAVPKNHQAVRNP
Sbjct: 301 HDESHLNKYLLRHKPTKVLSPEYLWDQQLLGWPAVLRKLRFTAVPKNHQAVRNP 354


>gi|32484985 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
           [Homo sapiens]
          Length = 347

 Score =  292 bits (747), Expect = 4e-79
 Identities = 143/283 (50%), Positives = 189/283 (66%), Gaps = 1/283 (0%)

Query: 71  YPQPKVLTPCRKDVLVVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLTVFAIKKYVAFL 130
           YPQPK+L      +L +TPWLAPIV EGTFN ++L   ++  N TIG+TVFA+ KY  F+
Sbjct: 66  YPQPKLLEHRPTQLLTLTPWLAPIVSEGTFNPELLQHIYQPLNLTIGVTVFAVGKYTHFI 125

Query: 131 KLFLETAEKHFMVGHRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVRAYKRWQDVSMRRME 190
           + FLE+AE+ FM G+RVHYY+FTD PAAVP V LG  R LS + ++ +  W++ SMRRME
Sbjct: 126 QSFLESAEEFFMRGYRVHYYIFTDNPAAVPGVPLGPHRLLSSIPIQGHSHWEETSMRRME 185

Query: 191 MISDFCERRFLSEVDYLVCVDVDMEFRDHVGVEILTPLFGTLHPGFYGSSREAFTYERRP 250
            IS    +R   EVDYL C+DVDM FR+  G E L  L   +HP +Y   R+ F YERR 
Sbjct: 186 TISQHIAKRAHREVDYLFCLDVDMVFRNPWGPETLGDLVAAIHPSYYAVPRQQFPYERRR 245

Query: 251 QSQAYIPKDEGDFYYLGGFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYL 310
            S A++   EGDFYY G  FGG V  V   TR CH A++ D+ANGI A W +ESHLN++ 
Sbjct: 246 VSTAFVADSEGDFYYGGAVFGGQVARVYEFTRGCHMAILADKANGIMAAWREESHLNRHF 305

Query: 311 LRHKPTKVLSPEYLWDQQLLGWPAVLRKLRFTAVPKNHQAVRN 353
           + +KP+KVLSPEYLWD +    P  L+ +RF+ + K+   +R+
Sbjct: 306 ISNKPSKVLSPEYLWDDR-KPQPPSLKLIRFSTLDKDISCLRS 347


>gi|122937275 alpha 1,3-galactosyltransferase 2 [Homo sapiens]
          Length = 340

 Score =  229 bits (585), Expect = 2e-60
 Identities = 123/274 (44%), Positives = 161/274 (58%), Gaps = 2/274 (0%)

Query: 81  RKDVLVVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLTVFAIKKYVA-FLKLFLETAEK 139
           R +VL  TPW API+W+G+F+ D+  ++ R QN TIGLT+FA+ +Y+  +L+ FLETAE+
Sbjct: 68  RPEVLTCTPWGAPIIWDGSFDPDVAKQEARQQNLTIGLTIFAVGRYLEKYLERFLETAEQ 127

Query: 140 HFMVGHRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVRAYKRWQDVSMRRMEMISDFCERR 199
           HFM G  V YYVFT+ P AVPRV LG GR+L V  V   +RWQDVSM RM  +       
Sbjct: 128 HFMAGQSVMYYVFTELPGAVPRVALGPGRRLPVERVARERRWQDVSMARMRTLHAALGGL 187

Query: 200 FLSEVDYLVCVDVDMEFRDHVGVEILTPLFGTLHPGFYGSSREAFTYERRPQSQAYIPKD 259
              E  ++ C+DVD  F    G E L      LH   Y        +ER   S A +   
Sbjct: 188 PGREAHFMFCMDVDQHFSGTFGPEALAESVAQLHSWHYHWPSWLLPFERDAHSAAAMAWG 247

Query: 260 EGDFYYLGGFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYLLRHKPTKVL 319
           +GDFY     FGGSV  ++ LT  C   +  D+A G+EA WHDESHLNK+   HKP KVL
Sbjct: 248 QGDFYNHAAVFGGSVAALRGLTAHCAGGLDWDRARGLEARWHDESHLNKFFWLHKPAKVL 307

Query: 320 SPEYLWDQQLLGWPAVLRKLRFTAVPKNHQAVRN 353
           SPE+ W    +G  A +R+ R    PK ++ +RN
Sbjct: 308 SPEFCWSPD-IGPRAEIRRPRLLWAPKGYRLLRN 340


>gi|134288859 glycosyltransferase 6 domain containing 1 [Homo
           sapiens]
          Length = 276

 Score =  156 bits (395), Expect = 2e-38
 Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 22/292 (7%)

Query: 26  MLVLVLFGYGVLSPRSLMPGSLERGFCMAVREPDHLQRVSLPRMVYPQPKVLTPCRKDVL 85
           ML+LVLF + ++         +ER F         ++ + L    +P+       R DV+
Sbjct: 6   MLLLVLFAFSLML--------VERYF-----RNHQVEELRLSDWFHPRK------RPDVI 46

Query: 86  VVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLTVFAIKKYVA-FLKLFLETAEKHFMVG 144
             T WLAP++WEGTF+  +L + +R +N T+GL VFA  ++   +L+ FL +A KHFM G
Sbjct: 47  TKTDWLAPVLWEGTFDRRVLEKHYRRRNITVGLAVFATGRFAEEYLRPFLHSANKHFMTG 106

Query: 145 HRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVRAYKRWQDVSMRRMEMISDFCERRFLSEV 204
           +RV +Y+  D    +P +     R     +V   + W D  +  ++ + +        EV
Sbjct: 107 YRVIFYIMVDAFFKLPDIEPSPLRTFKAFKVGTERWWLDGPLVHVKSLGEHIASHIQDEV 166

Query: 205 DYLVCVDVDMEFRDHVGVEILTPLFGTLHPGFYGSSREAFTYERRPQSQAYIPKDEGDFY 264
           D+L  +  +  F++  GVE L PL   LH  +Y  + + F YERRP S A IP  +GDFY
Sbjct: 167 DFLFSMAANQVFQNEFGVETLGPLVAQLHAWWYFRNTKNFPYERRPTSAACIPFGQGDFY 226

Query: 265 YLGGFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYLLRHKPT 316
           Y     GG+   +    +     ++ D  NG+ + +  E HLNKY   +KPT
Sbjct: 227 YGNLMVGGTPHNILDFIKEYLNGVIHDIKNGLNSTY--EKHLNKYFYLNKPT 276


>gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo
           sapiens]
          Length = 828

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 20/61 (32%), Positives = 29/61 (47%)

Query: 127 VAFLKLFLETAEKHFMVGHRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVRAYKRWQDVSM 186
           VA L  FLETA    MVG R+  +  T +P  + R    +G  + V E   ++    +S 
Sbjct: 283 VAVLAAFLETARASAMVGLRLAQHNSTLRPEKLVRAGAASGSLVPVKEPARFRGMARMSR 342

Query: 187 R 187
           R
Sbjct: 343 R 343


>gi|189083844 cathepsin C isoform a preproprotein [Homo sapiens]
          Length = 463

 Score = 28.5 bits (62), Expect = 9.5
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 262 DFYYLGGFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYLLRH 313
           +++Y+GGF+GG  + + +L    H  M V        V+ D  H  K +  H
Sbjct: 344 EYHYVGGFYGGCNEALMKLELVHHGPMAV-----AFEVYDDFLHYKKGIYHH 390


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.141    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,454,839
Number of Sequences: 37866
Number of extensions: 603520
Number of successful extensions: 1467
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1458
Number of HSP's gapped (non-prelim): 6
length of query: 354
length of database: 18,247,518
effective HSP length: 103
effective length of query: 251
effective length of database: 14,347,320
effective search space: 3601177320
effective search space used: 3601177320
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.