Search of human proteins with 5729909

Search of human proteins with 5729909

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5729909 lipophilin B precursor [Homo sapiens]
         (90 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5729909 lipophilin B precursor [Homo sapiens]                      177   1e-45
gi|5729907 lipophilin A precursor [Homo sapiens]                      107   2e-24
gi|46240866 secretoglobin family 1D member 4 [Homo sapiens]            96   5e-21
gi|4507809 secretoglobin, family 1A, member 1 (uteroglobin) [Hom...    47   3e-06
gi|70980552 secretoglobin-like [Homo sapiens]                          33   0.048
gi|16876445 secretoglobin, family 3A, member 2 [Homo sapiens]          28   1.2  
gi|48762937 annexin A10 [Homo sapiens]                                 25   10.0 

>gi|5729909 lipophilin B precursor [Homo sapiens]
          Length = 90

 Score =  177 bits (450), Expect = 1e-45
 Identities = 90/90 (100%), Positives = 90/90 (100%)

Query: 1  MKLSVCLLLVTLALCCYQANAEFCPALVSELLDFFFISEPLFKLSLAKFDAPPEAVAAKL 60
          MKLSVCLLLVTLALCCYQANAEFCPALVSELLDFFFISEPLFKLSLAKFDAPPEAVAAKL
Sbjct: 1  MKLSVCLLLVTLALCCYQANAEFCPALVSELLDFFFISEPLFKLSLAKFDAPPEAVAAKL 60

Query: 61 GVKRCTDQMSLQKRSLIAEVLVKILKKCSV 90
          GVKRCTDQMSLQKRSLIAEVLVKILKKCSV
Sbjct: 61 GVKRCTDQMSLQKRSLIAEVLVKILKKCSV 90


>gi|5729907 lipophilin A precursor [Homo sapiens]
          Length = 90

 Score =  107 bits (267), Expect = 2e-24
 Identities = 53/88 (60%), Positives = 65/88 (73%)

Query: 1  MKLSVCLLLVTLALCCYQANAEFCPALVSELLDFFFISEPLFKLSLAKFDAPPEAVAAKL 60
          M+LSVCLLL+TLALCCY+ANA  C AL SE+  F    +P+FK  LAKF AP EAVAAK+
Sbjct: 1  MRLSVCLLLLTLALCCYRANAVVCQALGSEITGFLLAGKPVFKFQLAKFKAPLEAVAAKM 60

Query: 61 GVKRCTDQMSLQKRSLIAEVLVKILKKC 88
           VK+C D M+ +KR LI + L KI +KC
Sbjct: 61 EVKKCVDTMAYEKRVLITKTLGKIAEKC 88


>gi|46240866 secretoglobin family 1D member 4 [Homo sapiens]
          Length = 83

 Score = 96.3 bits (238), Expect = 5e-21
 Identities = 45/74 (60%), Positives = 58/74 (78%)

Query: 1  MKLSVCLLLVTLALCCYQANAEFCPALVSELLDFFFISEPLFKLSLAKFDAPPEAVAAKL 60
          M+LSVCLL+V+LALCCYQA+A  CPA+ SE+  F F+S+    L +AK + PPEA+AAKL
Sbjct: 1  MRLSVCLLMVSLALCCYQAHALVCPAVASEITVFLFLSDAAVNLQVAKLNPPPEALAAKL 60

Query: 61 GVKRCTDQMSLQKR 74
           VK CTDQ+S +KR
Sbjct: 61 EVKHCTDQISFKKR 74


>gi|4507809 secretoglobin, family 1A, member 1 (uteroglobin) [Homo
          sapiens]
          Length = 91

 Score = 47.0 bits (110), Expect = 3e-06
 Identities = 26/84 (30%), Positives = 43/84 (51%)

Query: 1  MKLSVCLLLVTLALCCYQANAEFCPALVSELLDFFFISEPLFKLSLAKFDAPPEAVAAKL 60
          MKL+V L LVTLALCC  A+AE CP+    +      +   ++ ++  F    +   A  
Sbjct: 1  MKLAVTLTLVTLALCCSSASAEICPSFQRVIETLLMDTPSSYEAAMELFSPDQDMREAGA 60

Query: 61 GVKRCTDQMSLQKRSLIAEVLVKI 84
           +K+  D +  + R  I +++ KI
Sbjct: 61 QLKKLVDTLPQKPRESIIKLMEKI 84


>gi|70980552 secretoglobin-like [Homo sapiens]
          Length = 96

 Score = 33.1 bits (74), Expect = 0.048
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 4  SVCLLLVTLALCCYQANAEFCPALVSELLDFFF-ISEPLFKLSLAKFDAPPEAVAAKLGV 62
          + C LL  LAL C     + C  +   L +  F +S+ L K  LA+++  P    + L V
Sbjct: 6  ATCALL--LALICSVQLGDACLDIDKLLANVVFDVSQDLLKEELARYNPSPLTEESFLNV 63

Query: 63 KRCTDQMSLQKRSLIAEVLVKILK 86
          ++C   +S+ +R   + V+ KIL+
Sbjct: 64 QQCFANVSVTERFAHSVVIKKILQ 87


>gi|16876445 secretoglobin, family 3A, member 2 [Homo sapiens]
          Length = 93

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 17/92 (18%)

Query: 1  MKLSVCLLLVTLALCCYQANA-----------EFCPALVSELLDFFFISEPLFKLSLAKF 49
          MKL    LLVT++LC Y A A           +  P  +  +L F    +PL KL L   
Sbjct: 1  MKLVTIFLLVTISLCSYSATAFLINKVPLPVDKLAPLPLDNILPFM---DPL-KLLLKTL 56

Query: 50 DAPPEAVAAKLGVKRCTDQMSLQKRSLIAEVL 81
              E +    G+++C +++  +    + ++L
Sbjct: 57 GISVEHLVE--GLRKCVNELGPEASEAVKKLL 86


>gi|48762937 annexin A10 [Homo sapiens]
          Length = 324

 Score = 25.4 bits (54), Expect = 10.0
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 8   LLVTLALCCYQANAEFCPALVSELLDFFFISEPLFKLSLAK 48
           LLV + LC     A F   L S + DF F ++ + ++ +A+
Sbjct: 237 LLVAIVLCVRDKPAYFAYRLYSAIHDFGFHNKTVIRILIAR 277


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.329    0.138    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,877,838
Number of Sequences: 37866
Number of extensions: 86394
Number of successful extensions: 215
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 208
Number of HSP's gapped (non-prelim): 7
length of query: 90
length of database: 18,247,518
effective HSP length: 62
effective length of query: 28
effective length of database: 15,899,826
effective search space: 445195128
effective search space used: 445195128
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 54 (25.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.