Search of human proteins with 5670342

Search of human proteins with 5670342

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5670342 ketohexokinase isoform b [Homo sapiens]
         (298 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5670342 ketohexokinase isoform b [Homo sapiens]                    602   e-172
gi|4557693 ketohexokinase isoform a [Homo sapiens]                    544   e-155
gi|11545855 ribokinase [Homo sapiens]                                  40   0.003
gi|93102367 ral guanine nucleotide dissociation stimulator-like ...    30   3.4  
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa...    30   3.4  
gi|7662018 PHD finger protein 3 [Homo sapiens]                         28   9.8  

>gi|5670342 ketohexokinase isoform b [Homo sapiens]
          Length = 298

 Score =  602 bits (1553), Expect = e-172
 Identities = 298/298 (100%), Positives = 298/298 (100%)

Query: 1   MEEKQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFM 60
           MEEKQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFM
Sbjct: 1   MEEKQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFM 60

Query: 61  GSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSLPDV 120
           GSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSLPDV
Sbjct: 61  GSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSLPDV 120

Query: 121 SATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPREELF 180
           SATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPREELF
Sbjct: 121 SATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPREELF 180

Query: 181 QLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLL 240
           QLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLL
Sbjct: 181 QLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLL 240

Query: 241 HSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFDGIV 298
           HSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFDGIV
Sbjct: 241 HSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFDGIV 298


>gi|4557693 ketohexokinase isoform a [Homo sapiens]
          Length = 298

 Score =  544 bits (1402), Expect = e-155
 Identities = 270/298 (90%), Positives = 281/298 (94%)

Query: 1   MEEKQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFM 60
           MEEKQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFM
Sbjct: 1   MEEKQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFM 60

Query: 61  GSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSLPDV 120
           GSMAPGHVADF++ D RR  VD+    +Q+ G  P +  IIN ++G+RTI+ +D SLPDV
Sbjct: 61  GSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDV 120

Query: 121 SATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPREELF 180
           SATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPREELF
Sbjct: 121 SATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPREELF 180

Query: 181 QLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLL 240
           QLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLL
Sbjct: 181 QLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLL 240

Query: 241 HSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFDGIV 298
           HSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFDGIV
Sbjct: 241 HSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFDGIV 298


>gi|11545855 ribokinase [Homo sapiens]
          Length = 322

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 58/288 (20%), Positives = 109/288 (37%), Gaps = 41/288 (14%)

Query: 2   EEKQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFMG 61
           E   ++ VG  + D++SL  + PK    I         GG  +N C   + LGA  + + 
Sbjct: 14  EVAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVC 73

Query: 62  SMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSLPDVS 121
            +      +  + + ++  +  ++  +Q+K     +  II N+ G   IV+   +   ++
Sbjct: 74  KVGKDSFGNDYIENLKQNDIS-TEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLN 132

Query: 122 ATDFE---------KVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEV 172
             D           KV + Q   + I    + E + M +R        P      +    
Sbjct: 133 TEDLRAAANVISRAKVMVCQ---LEITPATSLEALTMARRSGVKTLFNPAPAIADLDP-- 187

Query: 173 EKPREELFQLFGYGDVVFVSK---DVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEG 229
                   Q +   DV   ++   ++   L   SA +A       +++G  +V       
Sbjct: 188 --------QFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVII----- 234

Query: 230 ADALGPDGKLLHSDAFPPP--------RVVDTLGAGDTFNASVIFSLS 269
              LG +G ++ S   P P        + VDT GAGD+F  ++ F L+
Sbjct: 235 --TLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLA 280


>gi|93102367 ral guanine nucleotide dissociation stimulator-like 1
           [Homo sapiens]
          Length = 803

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 11/83 (13%)

Query: 134 KWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRV--SVEVEKPREELFQLFGYGDVVFV 191
           +W+ +EG          Q    H   Q    KIR   +  +EK  E L   FG  D  ++
Sbjct: 78  RWLGVEGD---------QLPPGHTVSQYETCKIRTIKAGTLEKLVENLLTAFGDNDFTYI 128

Query: 192 SKDVAKHLGFQSAEEALRGLYGR 214
           S  ++ + GF S +E L  L  R
Sbjct: 129 SIFLSTYRGFASTKEVLELLLDR 151


>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
           sapiens]
          Length = 2881

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 12/94 (12%)

Query: 138 IEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAK 197
           IEG+ + E+VK   +I  ++   P EQ +++   VE P EE   +    D +  S+ V K
Sbjct: 649 IEGKQSEEEVKGSMKIKKNSAPLPGEQPLQLF--VENPSEEDAAIV---DKILSSRTVKK 703

Query: 198 HLG---FQSAEEALRGLYGRVRKGAVLVCAWAEE 228
            +        EE     + + +  + L C WA E
Sbjct: 704 EISPGVMIDTEE----FFVKYKNYSYLHCEWATE 733


>gi|7662018 PHD finger protein 3 [Homo sapiens]
          Length = 2039

 Score = 28.1 bits (61), Expect = 9.8
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 5/72 (6%)

Query: 149  MLQRIDAHNTRQPPEQKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAKHLGFQSAEEAL 208
            +++R+   N + P E+  +V+ ++EK   ELF  F   D  +  K+  + L F   +   
Sbjct: 939  LMKRLTDSNLKVPEEKAAKVATKIEK---ELFSFFRDTDAKY--KNKYRSLMFNLKDPKN 993

Query: 209  RGLYGRVRKGAV 220
              L+ +V KG V
Sbjct: 994  NILFKKVLKGEV 1005


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,129,953
Number of Sequences: 37866
Number of extensions: 531961
Number of successful extensions: 1170
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1166
Number of HSP's gapped (non-prelim): 7
length of query: 298
length of database: 18,247,518
effective HSP length: 102
effective length of query: 196
effective length of database: 14,385,186
effective search space: 2819496456
effective search space used: 2819496456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.