Search of human proteins with 56549677

Search of human proteins with 56549677

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|56549677 solute carrier family 41, member 3 isoform 4 [Homo
sapiens]
         (461 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|56549677 solute carrier family 41, member 3 isoform 4 [Homo s...   905   0.0  
gi|56549671 solute carrier family 41, member 3 isoform 2 [Homo s...   795   0.0  
gi|56549673 solute carrier family 41, member 3 isoform 1 [Homo s...   733   0.0  
gi|56549675 solute carrier family 41, member 3 isoform 3 [Homo s...   645   0.0  
gi|51702206 solute carrier family 41 member 1 [Homo sapiens]          453   e-127
gi|207444687 solute carrier family 41, member 2 [Homo sapiens]        407   e-114
gi|108796649 hypothetical protein LOC283677 [Homo sapiens]             33   0.71 
gi|194239697 solute carrier family 1 (glutamate transporter), me...    29   7.9  
gi|30581137 phosphatidylinositol glycan anchor biosynthesis, cla...    29   7.9  

>gi|56549677 solute carrier family 41, member 3 isoform 4 [Homo
           sapiens]
          Length = 461

 Score =  905 bits (2338), Expect = 0.0
 Identities = 461/461 (100%), Positives = 461/461 (100%)

Query: 1   MVVTQLNLEFCFQGKKLRGFSCELTRSPHGVLPESFFTIMCQVVVPILLSGLCMMTAGLV 60
           MVVTQLNLEFCFQGKKLRGFSCELTRSPHGVLPESFFTIMCQVVVPILLSGLCMMTAGLV
Sbjct: 1   MVVTQLNLEFCFQGKKLRGFSCELTRSPHGVLPESFFTIMCQVVVPILLSGLCMMTAGLV 60

Query: 61  MNTIQHWPVFVEVKDLLTLVPPLVGLKGNLEMTLASRLSTAANTGQIDDPQEQHRVISSN 120
           MNTIQHWPVFVEVKDLLTLVPPLVGLKGNLEMTLASRLSTAANTGQIDDPQEQHRVISSN
Sbjct: 61  MNTIQHWPVFVEVKDLLTLVPPLVGLKGNLEMTLASRLSTAANTGQIDDPQEQHRVISSN 120

Query: 121 LALIQVQATVVGLLAAVAALLLGVVSREEVDVAKVELLCASSVLTAFLAAFALGVLMVCI 180
           LALIQVQATVVGLLAAVAALLLGVVSREEVDVAKVELLCASSVLTAFLAAFALGVLMVCI
Sbjct: 121 LALIQVQATVVGLLAAVAALLLGVVSREEVDVAKVELLCASSVLTAFLAAFALGVLMVCI 180

Query: 181 VIGARKLGVNPDNIATPIAASLGDLITLSILALVSSFFYRHKDSRYLTPLVCLSFAALTP 240
           VIGARKLGVNPDNIATPIAASLGDLITLSILALVSSFFYRHKDSRYLTPLVCLSFAALTP
Sbjct: 181 VIGARKLGVNPDNIATPIAASLGDLITLSILALVSSFFYRHKDSRYLTPLVCLSFAALTP 240

Query: 241 VWVLIAKQSPPIVKILKFGWFPIILAMVISSFGGLILSKTVSKQQYKGMAIFTPVICGVG 300
           VWVLIAKQSPPIVKILKFGWFPIILAMVISSFGGLILSKTVSKQQYKGMAIFTPVICGVG
Sbjct: 241 VWVLIAKQSPPIVKILKFGWFPIILAMVISSFGGLILSKTVSKQQYKGMAIFTPVICGVG 300

Query: 301 GNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPNPCSTFCTSEINSMSARVLLLLVVPGH 360
           GNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPNPCSTFCTSEINSMSARVLLLLVVPGH
Sbjct: 301 GNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPNPCSTFCTSEINSMSARVLLLLVVPGH 360

Query: 361 LIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVTILLYLAEVMVRLTWHQALDPDNHCIP 420
           LIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVTILLYLAEVMVRLTWHQALDPDNHCIP
Sbjct: 361 LIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVTILLYLAEVMVRLTWHQALDPDNHCIP 420

Query: 421 YLTGLGDLLGTGLLALCFFTDWLLKSKAELGGISELASGPP 461
           YLTGLGDLLGTGLLALCFFTDWLLKSKAELGGISELASGPP
Sbjct: 421 YLTGLGDLLGTGLLALCFFTDWLLKSKAELGGISELASGPP 461


>gi|56549671 solute carrier family 41, member 3 isoform 2 [Homo
           sapiens]
          Length = 487

 Score =  795 bits (2054), Expect = 0.0
 Identities = 407/428 (95%), Positives = 417/428 (97%)

Query: 34  ESFFTIMCQVVVPILLSGLCMMTAGLVMNTIQHWPVFVEVKDLLTLVPPLVGLKGNLEMT 93
           E+ ++I  QV VP + +GL +  AG++++  QHWPVFVEVKDLLTLVPPLVGLKGNLEMT
Sbjct: 60  ETAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVPPLVGLKGNLEMT 119

Query: 94  LASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVA 153
           LASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVA
Sbjct: 120 LASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVA 179

Query: 154 KVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAL 213
           KVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAL
Sbjct: 180 KVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAL 239

Query: 214 VSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFG 273
           VSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFG
Sbjct: 240 VSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFG 299

Query: 274 GLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWP 333
           GLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWP
Sbjct: 300 GLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWP 359

Query: 334 NPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQV 393
           NPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQV
Sbjct: 360 NPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQV 419

Query: 394 TILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGTGLLALCFFTDWLLKSKAELGGI 453
           TILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGTGLLALCFFTDWLLKSKAELGGI
Sbjct: 420 TILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGTGLLALCFFTDWLLKSKAELGGI 479

Query: 454 SELASGPP 461
           SELASGPP
Sbjct: 480 SELASGPP 487


>gi|56549673 solute carrier family 41, member 3 isoform 1 [Homo
           sapiens]
          Length = 507

 Score =  733 bits (1893), Expect = 0.0
 Identities = 376/398 (94%), Positives = 387/398 (97%)

Query: 34  ESFFTIMCQVVVPILLSGLCMMTAGLVMNTIQHWPVFVEVKDLLTLVPPLVGLKGNLEMT 93
           E+ ++I  QV VP + +GL +  AG++++  QHWPVFVEVKDLLTLVPPLVGLKGNLEMT
Sbjct: 60  ETAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVPPLVGLKGNLEMT 119

Query: 94  LASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVA 153
           LASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVA
Sbjct: 120 LASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVA 179

Query: 154 KVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAL 213
           KVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAL
Sbjct: 180 KVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAL 239

Query: 214 VSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFG 273
           VSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFG
Sbjct: 240 VSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFG 299

Query: 274 GLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWP 333
           GLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWP
Sbjct: 300 GLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWP 359

Query: 334 NPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQV 393
           NPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQV
Sbjct: 360 NPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQV 419

Query: 394 TILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGT 431
           TILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLG+
Sbjct: 420 TILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGS 457



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 14/154 (9%)

Query: 285 QYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPNPCSTFCTSEI 344
           + K +    P + G+ GNL     SR+ST  +          Q +    N       + +
Sbjct: 98  EVKDLLTLVPPLVGLKGNLEMTLASRLSTAANTGQIDDPQE-QHRVISSNLALIQVQATV 156

Query: 345 NSMSARV--LLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVTILLYLAEV 402
             + A V  LLL VV    +    + L+   SV+ +  F+  + L G++ V I++   ++
Sbjct: 157 VGLLAAVAALLLGVVSREEVDVAKVELLCASSVLTA--FLAAFAL-GVLMVCIVIGARKL 213

Query: 403 MVRLTWHQALDPDNHCIPYLTGLGDLLGTGLLAL 436
            V        +PDN   P    LGDL+   +LAL
Sbjct: 214 GV--------NPDNIATPIAASLGDLITLSILAL 239


>gi|56549675 solute carrier family 41, member 3 isoform 3 [Homo
           sapiens]
          Length = 471

 Score =  645 bits (1663), Expect = 0.0
 Identities = 340/398 (85%), Positives = 351/398 (88%), Gaps = 36/398 (9%)

Query: 34  ESFFTIMCQVVVPILLSGLCMMTAGLVMNTIQHWPVFVEVKDLLTLVPPLVGLKGNLEMT 93
           E+ ++I  QV VP + +GL +  AG++++  Q                            
Sbjct: 60  ETAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQ---------------------------- 91

Query: 94  LASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVA 153
                   ANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVA
Sbjct: 92  --------ANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVA 143

Query: 154 KVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAL 213
           KVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAL
Sbjct: 144 KVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAL 203

Query: 214 VSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFG 273
           VSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFG
Sbjct: 204 VSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFG 263

Query: 274 GLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWP 333
           GLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWP
Sbjct: 264 GLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWP 323

Query: 334 NPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQV 393
           NPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQV
Sbjct: 324 NPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQV 383

Query: 394 TILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGT 431
           TILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLG+
Sbjct: 384 TILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGS 421


>gi|51702206 solute carrier family 41 member 1 [Homo sapiens]
          Length = 513

 Score =  453 bits (1166), Expect = e-127
 Identities = 232/419 (55%), Positives = 304/419 (72%), Gaps = 1/419 (0%)

Query: 27  SPHGVLPESFFTIMCQVVVPILLSGLCMMTAGLVMNTIQHWPVFVEVKDLLTLVPPLVGL 86
           +P   L E+ F+I  QV+ P LL+G   + AG+V++ +QHW VF +V ++  LVP L+GL
Sbjct: 86  APPSPLKETSFSIGLQVLFPFLLAGFGTVAAGMVLDIVQHWEVFQKVTEVFILVPALLGL 145

Query: 87  KGNLEMTLASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVS 146
           KGNLEMTLASRLSTAAN G +D P+E  R+I+ N+ALIQVQATVVG LA++AA++ G + 
Sbjct: 146 KGNLEMTLASRLSTAANIGHMDTPKELWRMITGNMALIQVQATVVGFLASIAAVVFGWIP 205

Query: 147 REEVDVAKVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLI 206
                +    LLCASSV TAF+A+  LG++M+ ++IG+RK+G+NPDN+ATPIAASLGDLI
Sbjct: 206 DGHFSIPHAFLLCASSVATAFIASLVLGMIMIGVIIGSRKIGINPDNVATPIAASLGDLI 265

Query: 207 TLSILALVSSFFYRHKDS-RYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIIL 265
           TL++L+ +S   Y   +  RY+ PLVC  F AL PVWV++A++SP   ++L  GW P+I+
Sbjct: 266 TLALLSGISWGLYLELNHWRYIYPLVCAFFVALLPVWVVLARRSPATREVLYSGWEPVII 325

Query: 266 AMVISSFGGLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLP 325
           AM ISS GGLIL KTVS   + GMA+FTPVI GVGGNLVA+Q SRIST+LHM   PG   
Sbjct: 326 AMAISSVGGLILDKTVSDPNFAGMAVFTPVINGVGGNLVAVQASRISTFLHMNGMPGENS 385

Query: 326 LQMKKFWPNPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLY 385
            Q  +  P+PC+TF + ++NS SARVL LLVVPGHL+F Y I  ++G     +  F++ Y
Sbjct: 386 EQAPRRCPSPCTTFFSPDVNSRSARVLFLLVVPGHLVFLYTISCMQGGHTTLTLIFIIFY 445

Query: 386 LLAGLIQVTILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGTGLLALCFFTDWLL 444
           + A L+QV ILLY+A+ MV   W + LDPDN  IPYLT LGDLLGTGLLAL F   WL+
Sbjct: 446 MTAALLQVLILLYIADWMVHWMWGRGLDPDNFSIPYLTALGDLLGTGLLALSFHVLWLI 504


>gi|207444687 solute carrier family 41, member 2 [Homo sapiens]
          Length = 573

 Score =  407 bits (1047), Expect = e-114
 Identities = 219/415 (52%), Positives = 292/415 (70%), Gaps = 3/415 (0%)

Query: 32  LPESFFTIMC-QVVVPILLSGLCMMTAGLVMNTIQHWPVFVEVKDLLTLVPPLVGLKGNL 90
           LP+    IM  Q++VP LL+G   ++AG+V++ +QHW VF +V ++  LVP L+GLKGNL
Sbjct: 151 LPKESSGIMALQILVPFLLAGFGTVSAGMVLDIVQHWEVFRKVTEVFILVPALLGLKGNL 210

Query: 91  EMTLASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEV 150
           EMTLASRLSTA N G++D P E+  +I  NLAL QVQATVVG LAAVAA++LG +   + 
Sbjct: 211 EMTLASRLSTAVNIGKMDSPIEKWNLIIGNLALKQVQATVVGFLAAVAAIILGWIPEGKY 270

Query: 151 DVAKVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSI 210
            +    LLC+SSV TAF+A+   G++MV +++G++K G+NPDN+ATPIAAS GDLITL+I
Sbjct: 271 YLDHSILLCSSSVATAFIASLLQGIIMVGVIVGSKKTGINPDNVATPIAASFGDLITLAI 330

Query: 211 LALVSSFFYRHKDS-RYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVI 269
           LA +S   Y   ++  Y++PLV + F ALTP+W++IA + P    +L  GW P+I AMVI
Sbjct: 331 LAWISQGLYSCLETYYYISPLVGVFFLALTPIWIIIAAKHPATRTVLHSGWEPVITAMVI 390

Query: 270 SSFGGLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMK 329
           SS GGLIL  TVS     G+ ++TPVI G+GGNLVAIQ SRISTYLH+ S PG LP + K
Sbjct: 391 SSIGGLILDTTVSDPNLVGIVVYTPVINGIGGNLVAIQASRISTYLHLHSIPGELPDEPK 450

Query: 330 KFWPNPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAG 389
             +  P  TF    +N+ SA+VLLLLV+PGHLIF Y I+L++      +  F+V+YL   
Sbjct: 451 GCY-YPFRTFFGPGVNNKSAQVLLLLVIPGHLIFLYTIHLMKSGHTSLTIIFIVVYLFGA 509

Query: 390 LIQVTILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGTGLLALCFFTDWLL 444
           ++QV  LL++A+ MV   W +  DPD+  IPYLT LGDLLGT LLAL F   WL+
Sbjct: 510 VLQVFTLLWIADWMVHHFWRKGKDPDSFSIPYLTALGDLLGTALLALSFHFLWLI 564


>gi|108796649 hypothetical protein LOC283677 [Homo sapiens]
          Length = 266

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 16/48 (33%), Positives = 27/48 (56%)

Query: 335 PCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFV 382
           PC T+   + N  S  ++L +V+ GH   F    L+EG S+I S+ ++
Sbjct: 48  PCPTWKVFDSNEESGYLVLTIVISGHFFIFQGQTLLEGFSLIGSKDWL 95


>gi|194239697 solute carrier family 1 (glutamate transporter),
           member 7 [Homo sapiens]
          Length = 560

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 22/157 (14%)

Query: 77  LTLVPPLVGLKGNLEMTLASRLSTAANTGQIDDPQE---QHRVISSNLA--LIQVQATV- 130
           +T   P+V ++G L+  L + L+T++++  +    +   ++  I   +A  ++ V AT+ 
Sbjct: 319 ITKKNPIVFIRGILQALLIA-LATSSSSATLPITFKCLLENNHIDRRIARFVLPVGATIN 377

Query: 131 ---VGLLAAVAALLLGVVSREEVDVAKVELLCASSVLTAFLAAFALGVLMVCIVIGARKL 187
                L  AVAA+ +  V+  E+D  ++  +  ++   +  AA      +V +VI    +
Sbjct: 378 MDGTALYEAVAAIFIAQVNNYELDFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSV 437

Query: 188 GVNPDNIATPIAAS------------LGDLITLSILA 212
           G+  D+I   IA              LGD +   I+A
Sbjct: 438 GLPTDDITLIIAVDWALDRFRTMINVLGDALAAGIMA 474


>gi|30581137 phosphatidylinositol glycan anchor biosynthesis, class
           Z [Homo sapiens]
          Length = 579

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 29/190 (15%)

Query: 134 LAAVAALLLGVVSREEVDVAKVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDN 193
           LA    LL GV+  + +  A   L           A+  +G+L     +GAR L  +P +
Sbjct: 318 LAVNGFLLFGVLHAQALQAAWQRLQ------VGLQASAQMGLLRA---LGARSLLSSPRS 368

Query: 194 IATPIAASLGDLITLSILALVSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIV 253
                      L+    LAL+S+F   H+++R+L PL       L P+ +L + Q+ P+ 
Sbjct: 369 YLL--------LLYFMPLALLSAF--SHQEARFLIPL-------LVPLVLLCSPQTQPVP 411

Query: 254 KILKFGWFPIILAMVISSFGGLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRIST 313
                G   +  A+    FG L     V   +Y    +  PV+     +   + T     
Sbjct: 412 ---WKGTVVLFNALGALLFGCLHQGGLVPGLEYLEQVVHAPVLPSTPTHYTLLFTHTYMP 468

Query: 314 YLHMWSAPGV 323
             H+   PG+
Sbjct: 469 PRHLLHLPGL 478


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.140    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,640,170
Number of Sequences: 37866
Number of extensions: 616637
Number of successful extensions: 1728
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1694
Number of HSP's gapped (non-prelim): 13
length of query: 461
length of database: 18,247,518
effective HSP length: 106
effective length of query: 355
effective length of database: 14,233,722
effective search space: 5052971310
effective search space used: 5052971310
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.