Guide to the Human Genome
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Name: WSCD2 Sequence: fasta or formatted (565aa) NCBI GI: 55749667
Description:

WSC domain containing 2

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         54           3
 C cysteine            3.4         19           1
 D aspartate           5.1         29           2
 E glutamate           6.2         35           3
 F phenylalanine       6.2         35           2
 G glycine             9.7         55           2
 H histidine           2.3         13           1
 I isoleucine          2.7         15           1
 K lysine              6.4         36           2
 L leucine             8.7         49           2
 M methionine          1.9         11           1
 N asparagine          2.8         16           1
 P proline             3.4         19           1
 Q glutamine           3.4         19           1
 R arginine            7.8         44           2
 S serine              5.1         29           2
 T threonine           4.1         23           2
 V valine              4.8         27           2
 W tryptophan          1.8         10           2
 Y tyrosine            4.8         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WSC domain containing 2 
WSCD1                 0.470   WSC domain containing 1 
KREMEN2               0.031   kringle-containing transmembrane protein 2 isoform b...
KREMEN2               0.031   kringle-containing transmembrane protein 2 isoform d...
KREMEN1               0.023   kringle-containing transmembrane protein 1 isoform 2...
KREMEN1               0.023   kringle-containing transmembrane protein 1 isoform ...
SULT6B1               0.007   sulfotransferase family, cytosolic, 6B, member 1 [Ho...
SULT1E1               0.006   sulfotransferase, estrogen-preferring 
BAIAP2L1              0.006   BAI1-associated protein 2-like 1 
CASZ1                 0.004   castor homolog 1, zinc finger isoform a 
SULT2A1               0.004   bile-salt sulfotransferase 2A1 
COL29A1               0.004   collagen, type XXIX, alpha 1 
DYNC2H1               0.004   dynein, cytoplasmic 2, heavy chain 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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