Guide to the Human Genome
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Name: OR2T1 Sequence: fasta or formatted (369aa) NCBI GI: 53793655
Description:

olfactory receptor, family 2, subfamily T, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         22           2
 C cysteine            3.5         13           2
 D aspartate           2.4          9           1
 E glutamate           2.7         10           2
 F phenylalanine       7.3         27           2
 G glycine             5.1         19           2
 H histidine           2.4          9           1
 I isoleucine          6.8         25           2
 K lysine              3.3         12           2
 L leucine            13.3         49           2
 M methionine          5.4         20           2
 N asparagine          3.0         11           1
 P proline             4.3         16           1
 Q glutamine           1.9          7           1
 R arginine            3.8         14           2
 S serine              7.0         26           2
 T threonine           7.0         26           2
 V valine              7.6         28           2
 W tryptophan          1.4          5           1
 Y tyrosine            5.7         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 2, subfamily T, member 1 ... 
OR2T6                 0.596   olfactory receptor, family 2, subfamily T, member 6 ...
OR2T27                0.595   olfactory receptor, family 2, subfamily T, member 27...
OR2T11                0.562   olfactory receptor, family 2, subfamily T, member 11...
OR2T2                 0.562   olfactory receptor, family 2, subfamily T, member 2 ...
OR2T35                0.552   olfactory receptor, family 2, subfamily T, member 35...
OR2T5                 0.512   olfactory receptor, family 2, subfamily T, member 5 ...
OR2T29                0.510   olfactory receptor, family 2, subfamily T, member 29...
OR2T4                 0.495   olfactory receptor, family 2, subfamily T, member 4 ...
OR2T10                0.478   olfactory receptor, family 2, subfamily T, member 10...
OR2T3                 0.455   olfactory receptor, family 2, subfamily T, member 3 ...
OR2T33                0.444   olfactory receptor, family 2, subfamily T, member 33...
OR2T34                0.444   olfactory receptor, family 2, subfamily T, member 34...
OR2V2                 0.442   olfactory receptor, family 2, subfamily V, member 2 ...
OR2M2                 0.440   olfactory receptor, family 2, subfamily M, member 2 ...
OR2M3                 0.440   olfactory receptor, family 2, subfamily M, member 3 ...
OR2T12                0.438   olfactory receptor, family 2, subfamily T, member 12...
OR2T8                 0.435   olfactory receptor, family 2, subfamily T, member 8 ...
OR2M5                 0.434   olfactory receptor, family 2, subfamily M, member 5 ...
OR2M7                 0.431   olfactory receptor, family 2, subfamily M, member 7 ...
OR2L2                 0.431   olfactory receptor, family 2, subfamily L, member 2 ...
OR2AK2                0.430   olfactory receptor, family 2, subfamily AK, member 2...
OR2M4                 0.419   olfactory receptor, family 2, subfamily M, member 4 ...
OR2L3                 0.416   olfactory receptor, family 2, subfamily L, member 3 ...
OR2L8                 0.415   olfactory receptor, family 2, subfamily L, member 8 ...
OR2L13                0.412   olfactory receptor, family 2, subfamily L, member 13...
OR2AG1                0.411   olfactory receptor, family 2, subfamily AG, member 1...
OR2AG2                0.408   olfactory receptor, family 2, subfamily AG, member 2...
OR2AE1                0.393   olfactory receptor, family 2, subfamily AE, member 1...
OR2Z1                 0.386   olfactory receptor, family 2, subfamily Z, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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