Guide to the Human Genome
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Name: OR2T4 Sequence: fasta or formatted (348aa) NCBI GI: 52317221
Description:

olfactory receptor, family 2, subfamily T, member 4

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         22           2
 C cysteine            3.2         11           2
 D aspartate           3.2         11           1
 E glutamate           2.6          9           1
 F phenylalanine       7.2         25           2
 G glycine             4.6         16           1
 H histidine           4.0         14           2
 I isoleucine          6.6         23           2
 K lysine              3.2         11           2
 L leucine            12.6         44           2
 M methionine          7.2         25           2
 N asparagine          2.9         10           1
 P proline             4.6         16           1
 Q glutamine           1.7          6           1
 R arginine            2.6          9           1
 S serine              8.0         28           3
 T threonine           6.0         21           1
 V valine              7.8         27           2
 W tryptophan          1.4          5           1
 Y tyrosine            4.3         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 2, subfamily T, member 4 ... 
OR2T5                 0.799   olfactory receptor, family 2, subfamily T, member 5 ...
OR2T29                0.789   olfactory receptor, family 2, subfamily T, member 29...
OR2T10                0.622   olfactory receptor, family 2, subfamily T, member 10...
OR2T3                 0.573   olfactory receptor, family 2, subfamily T, member 3 ...
OR2T34                0.566   olfactory receptor, family 2, subfamily T, member 34...
OR2T2                 0.548   olfactory receptor, family 2, subfamily T, member 2 ...
OR2T11                0.548   olfactory receptor, family 2, subfamily T, member 11...
OR2T35                0.542   olfactory receptor, family 2, subfamily T, member 35...
OR2T27                0.539   olfactory receptor, family 2, subfamily T, member 27...
OR2T1                 0.525   olfactory receptor, family 2, subfamily T, member 1 ...
OR2T6                 0.497   olfactory receptor, family 2, subfamily T, member 6 ...
OR2T33                0.469   olfactory receptor, family 2, subfamily T, member 33...
OR2M2                 0.461   olfactory receptor, family 2, subfamily M, member 2 ...
OR2T8                 0.458   olfactory receptor, family 2, subfamily T, member 8 ...
OR2T12                0.449   olfactory receptor, family 2, subfamily T, member 12...
OR2M3                 0.446   olfactory receptor, family 2, subfamily M, member 3 ...
OR2M4                 0.445   olfactory receptor, family 2, subfamily M, member 4 ...
OR2M7                 0.442   olfactory receptor, family 2, subfamily M, member 7 ...
OR2M5                 0.442   olfactory receptor, family 2, subfamily M, member 5 ...
OR2V2                 0.434   olfactory receptor, family 2, subfamily V, member 2 ...
OR2L2                 0.430   olfactory receptor, family 2, subfamily L, member 2 ...
OR2L3                 0.424   olfactory receptor, family 2, subfamily L, member 3 ...
OR2L8                 0.421   olfactory receptor, family 2, subfamily L, member 8 ...
OR2AG1                0.407   olfactory receptor, family 2, subfamily AG, member 1...
OR2AG2                0.405   olfactory receptor, family 2, subfamily AG, member 2...
OR2L13                0.405   olfactory receptor, family 2, subfamily L, member 13...
OR2AE1                0.391   olfactory receptor, family 2, subfamily AE, member 1...
OR2Z1                 0.389   olfactory receptor, family 2, subfamily Z, member 1 ...
OR2AK2                0.385   olfactory receptor, family 2, subfamily AK, member 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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