Guide to the Human Genome
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Name: ANXA13 Sequence: fasta or formatted (316aa) NCBI GI: 51895795
Description:

annexin A13 isoform a

Referenced in:

Coagulation

Other entries for this name:
alt prot [357aa] annexin A13 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         30           2
 C cysteine            1.3          4           1
 D aspartate           8.2         26           2
 E glutamate           9.2         29           3
 F phenylalanine       2.5          8           1
 G glycine             7.0         22           1
 H histidine           0.6          2           1
 I isoleucine          5.1         16           2
 K lysine              9.8         31           2
 L leucine            11.1         35           2
 M methionine          1.6          5           1
 N asparagine          2.8          9           1
 P proline             0.6          2           1
 Q glutamine           5.4         17           2
 R arginine            6.0         19           1
 S serine              6.0         19           2
 T threonine           5.1         16           1
 V valine              4.4         14           2
 W tryptophan          0.3          1           1
 Y tyrosine            3.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   annexin A13 isoform a 
ANXA13                0.980   annexin A13 isoform b 
ANXA7                 0.485   annexin VII isoform 2 
ANXA7                 0.485   annexin VII isoform 1 
ANXA4                 0.454   annexin IV 
ANXA11                0.449   annexin A11 
ANXA11                0.449   annexin A11 
ANXA11                0.449   annexin A11 
ANXA8L2               0.449   annexin A8L2 
ANXA8                 0.447   annexin A8 
ANXA8L1               0.446   annexin A8-like 1 
ANXA6                 0.436   annexin VI isoform 2 
ANXA6                 0.436   annexin VI isoform 1 
ANXA5                 0.410   annexin 5 
ANXA3                 0.405   annexin A3 
ANXA1                 0.392   annexin I 
ANXA2                 0.388   annexin A2 isoform 2 
ANXA2                 0.388   annexin A2 isoform 2 
ANXA2                 0.388   annexin A2 isoform 1 
ANXA2                 0.388   annexin A2 isoform 2 
ANXA10                0.300   annexin A10 
ANXA9                 0.237   annexin A9 
LOC100291229          0.132   PREDICTED: hypothetical protein XP_002347094 
EEA1                  0.014   early endosome antigen 1, 162kD 
TBC1D12               0.014   TBC1 domain family, member 12 
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CCDC6                 0.008   coiled-coil domain containing 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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