BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|13375891 hypothetical protein LOC79701 isoform 1 [Homo sapiens] (319 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|13375891 hypothetical protein LOC79701 isoform 1 [Homo sapiens] 649 0.0 gi|28973797 hypothetical protein LOC79701 isoform 2 [Homo sapiens] 552 e-157 gi|186928835 leprecan 1 isoform 1 [Homo sapiens] 58 1e-08 gi|226371643 leprecan 1 isoform 2 [Homo sapiens] 57 2e-08 gi|197313662 leprecan-like 1 isoform b [Homo sapiens] 55 1e-07 gi|27764882 leprecan-like 1 isoform a [Homo sapiens] 55 1e-07 gi|28466983 leprecan-like 2 [Homo sapiens] 50 3e-06 gi|13489073 egl nine homolog 1 [Homo sapiens] 34 0.15 gi|11545787 egl nine homolog 3 [Homo sapiens] 33 0.34 gi|11545906 fructosamine 3 kinase [Homo sapiens] 30 2.2 gi|239749721 PREDICTED: hypothetical protein [Homo sapiens] 30 3.7 gi|239743976 PREDICTED: hypothetical protein [Homo sapiens] 30 3.7 gi|8923271 coiled-coil domain containing 49 [Homo sapiens] 29 6.3 >gi|13375891 hypothetical protein LOC79701 isoform 1 [Homo sapiens] Length = 319 Score = 649 bits (1675), Expect = 0.0 Identities = 319/319 (100%), Positives = 319/319 (100%) Query: 1 MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL 60 MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL Sbjct: 1 MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL 60 Query: 61 WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE 120 WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE Sbjct: 61 WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE 120 Query: 121 EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL 180 EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL Sbjct: 121 EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL 180 Query: 181 YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD 240 YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD Sbjct: 181 YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD 240 Query: 241 YTSLLYLSNYLEDFGGGRFMFMEEGANKTVEPRAGRVSFFTSGSENLHRVEKVHWGTRYA 300 YTSLLYLSNYLEDFGGGRFMFMEEGANKTVEPRAGRVSFFTSGSENLHRVEKVHWGTRYA Sbjct: 241 YTSLLYLSNYLEDFGGGRFMFMEEGANKTVEPRAGRVSFFTSGSENLHRVEKVHWGTRYA 300 Query: 301 ITIAFSCNPDHGIEDPAFP 319 ITIAFSCNPDHGIEDPAFP Sbjct: 301 ITIAFSCNPDHGIEDPAFP 319 >gi|28973797 hypothetical protein LOC79701 isoform 2 [Homo sapiens] Length = 331 Score = 552 bits (1423), Expect = e-157 Identities = 275/279 (98%), Positives = 275/279 (98%) Query: 1 MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL 60 MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL Sbjct: 1 MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL 60 Query: 61 WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE 120 WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE Sbjct: 61 WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE 120 Query: 121 EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL 180 EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL Sbjct: 121 EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL 180 Query: 181 YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD 240 YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD Sbjct: 181 YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD 240 Query: 241 YTSLLYLSNYLEDFGGGRFMFMEEGANKTVEPRAGRVSF 279 YTSLLYLSNYLEDFGGGRFMFMEEGANKTVE RAG F Sbjct: 241 YTSLLYLSNYLEDFGGGRFMFMEEGANKTVERRAGCFCF 279 >gi|186928835 leprecan 1 isoform 1 [Homo sapiens] Length = 736 Score = 58.2 bits (139), Expect = 1e-08 Identities = 48/157 (30%), Positives = 67/157 (42%), Gaps = 28/157 (17%) Query: 180 LYREVRQKVQLTIAEAFGISA----SSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKV- 234 LY V +KV+ + F + S HL T + + +H HVD Sbjct: 537 LYYNVTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHP----VHVDNCI 592 Query: 235 -------------TYGSFDYTSLLYLSNYLEDFGGGRFMFMEEGANKT---VEPRAGRVS 278 Y DY+++LYL+ DF GG F F E A V+P+ GR Sbjct: 593 LNAETLVCVKEPPAYTFRDYSAILYLNG---DFDGGNFYFTELDAKTVTAEVQPQCGRAV 649 Query: 279 FFTSGSENLHRVEKVHWGTRYAITIAFSCNPDHGIED 315 F+SG+EN H V+ V G R AI + F+ +P H D Sbjct: 650 GFSSGTENPHGVKAVTRGQRCAIALWFTLDPRHSERD 686 >gi|226371643 leprecan 1 isoform 2 [Homo sapiens] Length = 697 Score = 57.0 bits (136), Expect = 2e-08 Identities = 47/153 (30%), Positives = 66/153 (43%), Gaps = 28/153 (18%) Query: 180 LYREVRQKVQLTIAEAFGISA----SSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKV- 234 LY V +KV+ + F + S HL T + + +H HVD Sbjct: 537 LYYNVTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHP----VHVDNCI 592 Query: 235 -------------TYGSFDYTSLLYLSNYLEDFGGGRFMFMEEGANKT---VEPRAGRVS 278 Y DY+++LYL+ DF GG F F E A V+P+ GR Sbjct: 593 LNAETLVCVKEPPAYTFRDYSAILYLNG---DFDGGNFYFTELDAKTVTAEVQPQCGRAV 649 Query: 279 FFTSGSENLHRVEKVHWGTRYAITIAFSCNPDH 311 F+SG+EN H V+ V G R AI + F+ +P H Sbjct: 650 GFSSGTENPHGVKAVTRGQRCAIALWFTLDPRH 682 >gi|197313662 leprecan-like 1 isoform b [Homo sapiens] Length = 527 Score = 54.7 bits (130), Expect = 1e-07 Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 6/73 (8%) Query: 240 DYTSLLYLSNYLEDFGGGRFMFMEEGANK---TVEPRAGRVSFFTSGSENLHRVEKVHWG 296 DY++LLY++ +DF GG F+F E A +++P+ GR+ F+SG EN H V+ V G Sbjct: 423 DYSALLYMN---DDFEGGEFIFTEMDAKTVTASIKPKCGRMISFSSGGENPHGVKAVTKG 479 Query: 297 TRYAITIAFSCNP 309 R A+ + F+ +P Sbjct: 480 KRCAVALWFTLDP 492 >gi|27764882 leprecan-like 1 isoform a [Homo sapiens] Length = 708 Score = 54.7 bits (130), Expect = 1e-07 Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 6/73 (8%) Query: 240 DYTSLLYLSNYLEDFGGGRFMFMEEGANK---TVEPRAGRVSFFTSGSENLHRVEKVHWG 296 DY++LLY++ +DF GG F+F E A +++P+ GR+ F+SG EN H V+ V G Sbjct: 604 DYSALLYMN---DDFEGGEFIFTEMDAKTVTASIKPKCGRMISFSSGGENPHGVKAVTKG 660 Query: 297 TRYAITIAFSCNP 309 R A+ + F+ +P Sbjct: 661 KRCAVALWFTLDP 673 >gi|28466983 leprecan-like 2 [Homo sapiens] Length = 736 Score = 49.7 bits (117), Expect = 3e-06 Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 6/75 (8%) Query: 240 DYTSLLYLSNYLEDFGGGRFMFMEEGA---NKTVEPRAGRVSFFTSGSENLHRVEKVHWG 296 DY+ LLYL+ +DF GG F E A V PR GR+ F+SG EN H V V G Sbjct: 608 DYSGLLYLN---DDFQGGDLFFTEPNALTVTARVRPRCGRLVAFSSGVENPHGVWAVTRG 664 Query: 297 TRYAITIAFSCNPDH 311 R A+ + + P+H Sbjct: 665 RRCALALWHTWAPEH 679 >gi|13489073 egl nine homolog 1 [Homo sapiens] Length = 426 Score = 34.3 bits (77), Expect = 0.15 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%) Query: 230 HVDKVTYGSFDYTSLLYLS-NYLEDFGGGRFMFMEEGANK--TVEPRAGRVSFFTSGSEN 286 HVD T + YL+ ++ GG EG + +EP+ R+ FF S N Sbjct: 313 HVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRN 372 Query: 287 LHRVEKVHWGTRYAITI 303 H V+ + TRYAIT+ Sbjct: 373 PHEVQPA-YATRYAITV 388 >gi|11545787 egl nine homolog 3 [Homo sapiens] Length = 239 Score = 33.1 bits (74), Expect = 0.34 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 4/77 (5%) Query: 230 HVDKVTYGSFDYTSLLYLS-NYLEDFGGGRFMFMEEGAN--KTVEPRAGRVSFFTSGSEN 286 HVD T + YL+ N+ GG EG + VEP R+ FF S N Sbjct: 135 HVDNPNGDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSDRRN 194 Query: 287 LHRVEKVHWGTRYAITI 303 H V+ + TRYA+T+ Sbjct: 195 PHEVQP-SYATRYAMTV 210 >gi|11545906 fructosamine 3 kinase [Homo sapiens] Length = 309 Score = 30.4 bits (67), Expect = 2.2 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Query: 27 KKDRAPREVQRLWQRPWLRTAGLGAGF-VLTALL---LWSSLGADDGVAEVL 74 +KD A RE + LW R ++ L G ++ ALL LWS A+D V ++ Sbjct: 181 EKDYADREARELWSRLQVKIPDLFCGLEIVPALLHGDLWSGNVAEDDVGPII 232 >gi|239749721 PREDICTED: hypothetical protein [Homo sapiens] Length = 378 Score = 29.6 bits (65), Expect = 3.7 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 61 WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGC--TPRKCGRGVTDVV 116 W DD ++ A A R VP + D S RF C +PR+C R +T V Sbjct: 134 WRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCERCLTSDV 191 >gi|239743976 PREDICTED: hypothetical protein [Homo sapiens] Length = 378 Score = 29.6 bits (65), Expect = 3.7 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 61 WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGC--TPRKCGRGVTDVV 116 W DD ++ A A R VP + D S RF C +PR+C R +T V Sbjct: 134 WRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCERCLTSDV 191 >gi|8923271 coiled-coil domain containing 49 [Homo sapiens] Length = 425 Score = 28.9 bits (63), Expect = 6.3 Identities = 12/32 (37%), Positives = 21/32 (65%) Query: 2 APQRRAATKAPEGNGAAERRNRSSTKKDRAPR 33 +P R A+ K+ G+ +RR+RS ++ R+PR Sbjct: 266 SPPRHASKKSTREAGSRDRRSRSLGRRSRSPR 297 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.135 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,967,363 Number of Sequences: 37866 Number of extensions: 511722 Number of successful extensions: 1169 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 1158 Number of HSP's gapped (non-prelim): 14 length of query: 319 length of database: 18,247,518 effective HSP length: 102 effective length of query: 217 effective length of database: 14,385,186 effective search space: 3121585362 effective search space used: 3121585362 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.