Search of human proteins with 13375891

Search of human proteins with 13375891

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13375891 hypothetical protein LOC79701 isoform 1 [Homo
sapiens]
         (319 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13375891 hypothetical protein LOC79701 isoform 1 [Homo sapiens]    649   0.0  
gi|28973797 hypothetical protein LOC79701 isoform 2 [Homo sapiens]    552   e-157
gi|186928835 leprecan 1 isoform 1 [Homo sapiens]                       58   1e-08
gi|226371643 leprecan 1 isoform 2 [Homo sapiens]                       57   2e-08
gi|197313662 leprecan-like 1 isoform b [Homo sapiens]                  55   1e-07
gi|27764882 leprecan-like 1 isoform a [Homo sapiens]                   55   1e-07
gi|28466983 leprecan-like 2 [Homo sapiens]                             50   3e-06
gi|13489073 egl nine homolog 1 [Homo sapiens]                          34   0.15 
gi|11545787 egl nine homolog 3 [Homo sapiens]                          33   0.34 
gi|11545906 fructosamine 3 kinase [Homo sapiens]                       30   2.2  
gi|239749721 PREDICTED: hypothetical protein [Homo sapiens]            30   3.7  
gi|239743976 PREDICTED: hypothetical protein [Homo sapiens]            30   3.7  
gi|8923271 coiled-coil domain containing 49 [Homo sapiens]             29   6.3  

>gi|13375891 hypothetical protein LOC79701 isoform 1 [Homo sapiens]
          Length = 319

 Score =  649 bits (1675), Expect = 0.0
 Identities = 319/319 (100%), Positives = 319/319 (100%)

Query: 1   MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL 60
           MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL
Sbjct: 1   MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL 60

Query: 61  WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE 120
           WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE
Sbjct: 61  WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE 120

Query: 121 EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL 180
           EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL
Sbjct: 121 EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL 180

Query: 181 YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD 240
           YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD
Sbjct: 181 YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD 240

Query: 241 YTSLLYLSNYLEDFGGGRFMFMEEGANKTVEPRAGRVSFFTSGSENLHRVEKVHWGTRYA 300
           YTSLLYLSNYLEDFGGGRFMFMEEGANKTVEPRAGRVSFFTSGSENLHRVEKVHWGTRYA
Sbjct: 241 YTSLLYLSNYLEDFGGGRFMFMEEGANKTVEPRAGRVSFFTSGSENLHRVEKVHWGTRYA 300

Query: 301 ITIAFSCNPDHGIEDPAFP 319
           ITIAFSCNPDHGIEDPAFP
Sbjct: 301 ITIAFSCNPDHGIEDPAFP 319


>gi|28973797 hypothetical protein LOC79701 isoform 2 [Homo sapiens]
          Length = 331

 Score =  552 bits (1423), Expect = e-157
 Identities = 275/279 (98%), Positives = 275/279 (98%)

Query: 1   MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL 60
           MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL
Sbjct: 1   MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL 60

Query: 61  WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE 120
           WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE
Sbjct: 61  WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE 120

Query: 121 EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL 180
           EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL
Sbjct: 121 EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL 180

Query: 181 YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD 240
           YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD
Sbjct: 181 YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD 240

Query: 241 YTSLLYLSNYLEDFGGGRFMFMEEGANKTVEPRAGRVSF 279
           YTSLLYLSNYLEDFGGGRFMFMEEGANKTVE RAG   F
Sbjct: 241 YTSLLYLSNYLEDFGGGRFMFMEEGANKTVERRAGCFCF 279


>gi|186928835 leprecan 1 isoform 1 [Homo sapiens]
          Length = 736

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 48/157 (30%), Positives = 67/157 (42%), Gaps = 28/157 (17%)

Query: 180 LYREVRQKVQLTIAEAFGISA----SSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKV- 234
           LY  V +KV+  +   F +      S  HL   T    + +     +H      HVD   
Sbjct: 537 LYYNVTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHP----VHVDNCI 592

Query: 235 -------------TYGSFDYTSLLYLSNYLEDFGGGRFMFMEEGANKT---VEPRAGRVS 278
                         Y   DY+++LYL+    DF GG F F E  A      V+P+ GR  
Sbjct: 593 LNAETLVCVKEPPAYTFRDYSAILYLNG---DFDGGNFYFTELDAKTVTAEVQPQCGRAV 649

Query: 279 FFTSGSENLHRVEKVHWGTRYAITIAFSCNPDHGIED 315
            F+SG+EN H V+ V  G R AI + F+ +P H   D
Sbjct: 650 GFSSGTENPHGVKAVTRGQRCAIALWFTLDPRHSERD 686


>gi|226371643 leprecan 1 isoform 2 [Homo sapiens]
          Length = 697

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 47/153 (30%), Positives = 66/153 (43%), Gaps = 28/153 (18%)

Query: 180 LYREVRQKVQLTIAEAFGISA----SSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKV- 234
           LY  V +KV+  +   F +      S  HL   T    + +     +H      HVD   
Sbjct: 537 LYYNVTEKVRRIMESYFRLDTPLYFSYSHLVCRTAIEEVQAERKDDSHP----VHVDNCI 592

Query: 235 -------------TYGSFDYTSLLYLSNYLEDFGGGRFMFMEEGANKT---VEPRAGRVS 278
                         Y   DY+++LYL+    DF GG F F E  A      V+P+ GR  
Sbjct: 593 LNAETLVCVKEPPAYTFRDYSAILYLNG---DFDGGNFYFTELDAKTVTAEVQPQCGRAV 649

Query: 279 FFTSGSENLHRVEKVHWGTRYAITIAFSCNPDH 311
            F+SG+EN H V+ V  G R AI + F+ +P H
Sbjct: 650 GFSSGTENPHGVKAVTRGQRCAIALWFTLDPRH 682


>gi|197313662 leprecan-like 1 isoform b [Homo sapiens]
          Length = 527

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 6/73 (8%)

Query: 240 DYTSLLYLSNYLEDFGGGRFMFMEEGANK---TVEPRAGRVSFFTSGSENLHRVEKVHWG 296
           DY++LLY++   +DF GG F+F E  A     +++P+ GR+  F+SG EN H V+ V  G
Sbjct: 423 DYSALLYMN---DDFEGGEFIFTEMDAKTVTASIKPKCGRMISFSSGGENPHGVKAVTKG 479

Query: 297 TRYAITIAFSCNP 309
            R A+ + F+ +P
Sbjct: 480 KRCAVALWFTLDP 492


>gi|27764882 leprecan-like 1 isoform a [Homo sapiens]
          Length = 708

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 6/73 (8%)

Query: 240 DYTSLLYLSNYLEDFGGGRFMFMEEGANK---TVEPRAGRVSFFTSGSENLHRVEKVHWG 296
           DY++LLY++   +DF GG F+F E  A     +++P+ GR+  F+SG EN H V+ V  G
Sbjct: 604 DYSALLYMN---DDFEGGEFIFTEMDAKTVTASIKPKCGRMISFSSGGENPHGVKAVTKG 660

Query: 297 TRYAITIAFSCNP 309
            R A+ + F+ +P
Sbjct: 661 KRCAVALWFTLDP 673


>gi|28466983 leprecan-like 2 [Homo sapiens]
          Length = 736

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 6/75 (8%)

Query: 240 DYTSLLYLSNYLEDFGGGRFMFMEEGA---NKTVEPRAGRVSFFTSGSENLHRVEKVHWG 296
           DY+ LLYL+   +DF GG   F E  A      V PR GR+  F+SG EN H V  V  G
Sbjct: 608 DYSGLLYLN---DDFQGGDLFFTEPNALTVTARVRPRCGRLVAFSSGVENPHGVWAVTRG 664

Query: 297 TRYAITIAFSCNPDH 311
            R A+ +  +  P+H
Sbjct: 665 RRCALALWHTWAPEH 679


>gi|13489073 egl nine homolog 1 [Homo sapiens]
          Length = 426

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)

Query: 230 HVDKVTYGSFDYTSLLYLS-NYLEDFGGGRFMFMEEGANK--TVEPRAGRVSFFTSGSEN 286
           HVD         T + YL+ ++     GG      EG  +   +EP+  R+ FF S   N
Sbjct: 313 HVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRN 372

Query: 287 LHRVEKVHWGTRYAITI 303
            H V+   + TRYAIT+
Sbjct: 373 PHEVQPA-YATRYAITV 388


>gi|11545787 egl nine homolog 3 [Homo sapiens]
          Length = 239

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 4/77 (5%)

Query: 230 HVDKVTYGSFDYTSLLYLS-NYLEDFGGGRFMFMEEGAN--KTVEPRAGRVSFFTSGSEN 286
           HVD         T + YL+ N+     GG      EG +    VEP   R+ FF S   N
Sbjct: 135 HVDNPNGDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSDRRN 194

Query: 287 LHRVEKVHWGTRYAITI 303
            H V+   + TRYA+T+
Sbjct: 195 PHEVQP-SYATRYAMTV 210


>gi|11545906 fructosamine 3 kinase [Homo sapiens]
          Length = 309

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 27  KKDRAPREVQRLWQRPWLRTAGLGAGF-VLTALL---LWSSLGADDGVAEVL 74
           +KD A RE + LW R  ++   L  G  ++ ALL   LWS   A+D V  ++
Sbjct: 181 EKDYADREARELWSRLQVKIPDLFCGLEIVPALLHGDLWSGNVAEDDVGPII 232


>gi|239749721 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 378

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 61  WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGC--TPRKCGRGVTDVV 116
           W     DD ++   A      A R   VP + D  S  RF  C  +PR+C R +T  V
Sbjct: 134 WRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCERCLTSDV 191


>gi|239743976 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 378

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 61  WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGC--TPRKCGRGVTDVV 116
           W     DD ++   A      A R   VP + D  S  RF  C  +PR+C R +T  V
Sbjct: 134 WRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCERCLTSDV 191


>gi|8923271 coiled-coil domain containing 49 [Homo sapiens]
          Length = 425

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 12/32 (37%), Positives = 21/32 (65%)

Query: 2   APQRRAATKAPEGNGAAERRNRSSTKKDRAPR 33
           +P R A+ K+    G+ +RR+RS  ++ R+PR
Sbjct: 266 SPPRHASKKSTREAGSRDRRSRSLGRRSRSPR 297


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,967,363
Number of Sequences: 37866
Number of extensions: 511722
Number of successful extensions: 1169
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1158
Number of HSP's gapped (non-prelim): 14
length of query: 319
length of database: 18,247,518
effective HSP length: 102
effective length of query: 217
effective length of database: 14,385,186
effective search space: 3121585362
effective search space used: 3121585362
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.