Search of human proteins with 4758344

Search of human proteins with 4758344

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4758344 Fc fragment of IgE, high affinity I, receptor for,
gamma polypeptide precursor [Homo sapiens]
         (86 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758344 Fc fragment of IgE, high affinity I, receptor for, ga...   170   3e-43
gi|4557431 T-cell receptor zeta chain isoform 2 precursor [Homo ...    54   2e-08
gi|37595565 T-cell receptor zeta chain isoform 1 precursor [Homo...    54   2e-08
gi|122937404 membrane bound O-acyltransferase domain containing ...    27   4.5  
gi|66932947 alpha-2-macroglobulin precursor [Homo sapiens]             26   7.7  
gi|194440719 chondroadherin-like [Homo sapiens]                        26   7.7  

>gi|4758344 Fc fragment of IgE, high affinity I, receptor for,
          gamma polypeptide precursor [Homo sapiens]
          Length = 86

 Score =  170 bits (430), Expect = 3e-43
 Identities = 86/86 (100%), Positives = 86/86 (100%)

Query: 1  MIPAVVLLLLLLVEQAAALGEPQLCYILDAILFLYGIVLTLLYCRLKIQVRKAAITSYEK 60
          MIPAVVLLLLLLVEQAAALGEPQLCYILDAILFLYGIVLTLLYCRLKIQVRKAAITSYEK
Sbjct: 1  MIPAVVLLLLLLVEQAAALGEPQLCYILDAILFLYGIVLTLLYCRLKIQVRKAAITSYEK 60

Query: 61 SDGVYTGLSTRNQETYETLKHEKPPQ 86
          SDGVYTGLSTRNQETYETLKHEKPPQ
Sbjct: 61 SDGVYTGLSTRNQETYETLKHEKPPQ 86


>gi|4557431 T-cell receptor zeta chain isoform 2 precursor [Homo
          sapiens]
          Length = 163

 Score = 54.3 bits (129), Expect = 2e-08
 Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 1  MIPAVVLLLLLLVEQAAALG--EPQLCYILDAILFLYGIVLTLLYCRLKIQVRKAAITSY 58
          +  A +L   L + +A + G  +P+LCY+LD ILF+YG++LT L+ R+K   R A   +Y
Sbjct: 6  LFTAAILQAQLPITEAQSFGLLDPKLCYLLDGILFIYGVILTALFLRVKFS-RSADAPAY 64

Query: 59 EKSDG-VYTGLSTRNQETYETL 79
          ++    +Y  L+   +E Y+ L
Sbjct: 65 QQGQNQLYNELNLGRREEYDVL 86



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 62  DGVYTGLSTRNQETYETLKHEKPP 85
           DG+Y GLST  ++TY+ L  +  P
Sbjct: 138 DGLYQGLSTATKDTYDALHMQALP 161


>gi|37595565 T-cell receptor zeta chain isoform 1 precursor [Homo
          sapiens]
          Length = 164

 Score = 54.3 bits (129), Expect = 2e-08
 Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 1  MIPAVVLLLLLLVEQAAALG--EPQLCYILDAILFLYGIVLTLLYCRLKIQVRKAAITSY 58
          +  A +L   L + +A + G  +P+LCY+LD ILF+YG++LT L+ R+K   R A   +Y
Sbjct: 6  LFTAAILQAQLPITEAQSFGLLDPKLCYLLDGILFIYGVILTALFLRVKFS-RSADAPAY 64

Query: 59 EKSDG-VYTGLSTRNQETYETL 79
          ++    +Y  L+   +E Y+ L
Sbjct: 65 QQGQNQLYNELNLGRREEYDVL 86



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 62  DGVYTGLSTRNQETYETLKHEKPP 85
           DG+Y GLST  ++TY+ L  +  P
Sbjct: 139 DGLYQGLSTATKDTYDALHMQALP 162


>gi|122937404 membrane bound O-acyltransferase domain containing 1
           [Homo sapiens]
          Length = 495

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 18  ALGEPQLCYILDAILFLYGIVLTLLYCRLKIQVRKAAITSYEKSDGV 64
           A+G   +C+I    +F YGI+ T     L I  +K    +++  DG+
Sbjct: 114 AMGYLTICHISRIYIFHYGILTTDFSGPLMIVTQKITTLAFQVHDGL 160


>gi|66932947 alpha-2-macroglobulin precursor [Homo sapiens]
          Length = 1474

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 5  VVLLLLLLVEQAAALGEPQLCYILDAILFL----YGIVLTLLYCRLKIQVRKAAITSYEK 60
          V+LLL+LL   A+  G+PQ   ++ ++L       G VL L Y    + V  A++ S   
Sbjct: 12 VLLLLVLLPTDASVSGKPQYMVLVPSLLHTETTEKGCVL-LSYLNETVTV-SASLESVRG 69

Query: 61 SDGVYTGLSTRN 72
          +  ++T L   N
Sbjct: 70 NRSLFTDLEAEN 81


>gi|194440719 chondroadherin-like [Homo sapiens]
          Length = 762

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 1  MIPAVVLLLLLLVEQAAALGEPQLC 25
          ++P +VLLLL    QAAA   PQ C
Sbjct: 13 VLPLLVLLLLAPARQAAAQRCPQAC 37


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.140    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,973,675
Number of Sequences: 37866
Number of extensions: 89608
Number of successful extensions: 268
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 261
Number of HSP's gapped (non-prelim): 8
length of query: 86
length of database: 18,247,518
effective HSP length: 58
effective length of query: 28
effective length of database: 16,051,290
effective search space: 449436120
effective search space used: 449436120
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.