Search of human proteins with 4757708

Search of human proteins with 4757708

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4757708 acetyl-coenzyme A transporter [Homo sapiens]
         (549 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4757708 acetyl-coenzyme A transporter [Homo sapiens]              1111   0.0  
gi|19923957 major facilitator superfamily domain containing 3 [H...    66   7e-11
gi|52546737 olfactory receptor, family 9, subfamily K, member 2 ...    35   0.14 
gi|62865876 immunoglobulin superfamily, member 11 isoform b [Hom...    31   3.4  
gi|62865874 immunoglobulin superfamily, member 11 isoform a [Hom...    31   3.4  
gi|16306525 cyclin B3 isoform 1 [Homo sapiens]                         30   7.5  
gi|90669307 cyclin B3 isoform 3 [Homo sapiens]                         30   7.5  

>gi|4757708 acetyl-coenzyme A transporter [Homo sapiens]
          Length = 549

 Score = 1111 bits (2873), Expect = 0.0
 Identities = 549/549 (100%), Positives = 549/549 (100%)

Query: 1   MSPTISHKDSSRQRRPGNFSHSLDMKSGPLPPGGWDDSHLDSAGREGDREALLGDTGTGD 60
           MSPTISHKDSSRQRRPGNFSHSLDMKSGPLPPGGWDDSHLDSAGREGDREALLGDTGTGD
Sbjct: 1   MSPTISHKDSSRQRRPGNFSHSLDMKSGPLPPGGWDDSHLDSAGREGDREALLGDTGTGD 60

Query: 61  FLKAPQSFRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFS 120
           FLKAPQSFRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFS
Sbjct: 61  FLKAPQSFRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFS 120

Query: 121 LKLLWAPLVDAVYVKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALT 180
           LKLLWAPLVDAVYVKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALT
Sbjct: 121 LKLLWAPLVDAVYVKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALT 180

Query: 181 VAFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADF 240
           VAFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADF
Sbjct: 181 VAFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADF 240

Query: 241 CNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKKENEVSVVKEETQGITDTYKL 300
           CNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKKENEVSVVKEETQGITDTYKL
Sbjct: 241 CNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKKENEVSVVKEETQGITDTYKL 300

Query: 301 LFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILP 360
           LFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILP
Sbjct: 301 LFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILP 360

Query: 361 LIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIVVLLSYAL 420
           LIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIVVLLSYAL
Sbjct: 361 LIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIVVLLSYAL 420

Query: 421 HQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECV 480
           HQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECV
Sbjct: 421 HQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECV 480

Query: 481 GASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPKFKKLQDEGS 540
           GASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPKFKKLQDEGS
Sbjct: 481 GASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPKFKKLQDEGS 540

Query: 541 SSWKCKRNN 549
           SSWKCKRNN
Sbjct: 541 SSWKCKRNN 549


>gi|19923957 major facilitator superfamily domain containing 3 [Homo
           sapiens]
          Length = 412

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 72/280 (25%), Positives = 116/280 (41%), Gaps = 39/280 (13%)

Query: 75  ILLLLFLYVLQGIPLGL-AGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVY 133
           +L L  LY++QG+P GL +G +P++L++  +S T       ++ P+ LKL WAPLVDA  
Sbjct: 5   LLPLAGLYLVQGLPYGLQSGLLPVLLRAGGLSLTRVGLAKVLYAPWLLKLAWAPLVDAQ- 63

Query: 134 VKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALTVAFFLFEFLAATQ 193
               G  ++W+  +   LGL    L+       G      P  +A      L    AA Q
Sbjct: 64  ----GSARAWVTRSTAGLGLVCGLLAGLPPPGAGQAG--LPAAVA--GLLLLLNLGAAMQ 115

Query: 194 DIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRFQPQPRG 253
           D+A+D  A+ +L    +G  +T   V    G  L     LAL                  
Sbjct: 116 DVALDALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPT--------------- 160

Query: 254 IVTLSDFLFFWGTVFLITTT----LVALLKKENEVSVVKEE--TQGITDTYKLLFAIIKM 307
                   F W  +FL+         AL      +  + ++  ++    T  LL  ++ +
Sbjct: 161 --------FSWPQLFLLLAATYWLAAALAWAAPALRRLPQQPPSEQRPHTAHLLRDVLAV 212

Query: 308 PAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLAL 347
           P  +     +LT K+G   A ++  L L++ GV    L L
Sbjct: 213 PGTVWTAGFVLTYKLGEQGASSLFPLLLLDHGVSAPELGL 252


>gi|52546737 olfactory receptor, family 9, subfamily K, member 2
           [Homo sapiens]
          Length = 335

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 18/91 (19%)

Query: 53  LGDTGTG------DFLKAPQSFRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSK---- 102
           +GD GT       DF+ A    R EL  +L LLFL+V   I LG  G + +I+       
Sbjct: 23  MGDRGTSNHSEMTDFILAGFRVRPELHILLFLLFLFVYAMILLGNVGMMTIIMTDPRLNT 82

Query: 103 -------NVSYTDQAFFSFVFWPFSLKLLWA 126
                  N+S+ D  F+S V  P ++   W+
Sbjct: 83  PMYFFLGNLSFID-LFYSSVIEPKAMINFWS 112


>gi|62865876 immunoglobulin superfamily, member 11 isoform b [Homo
           sapiens]
          Length = 431

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 424 TVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGAS 483
           T+ +  VSI   N ++SD    GTY  L+N + ++GG       L ++ P +   C    
Sbjct: 97  TMPATNVSIFINNTQLSDT---GTYQCLVNNLPDIGGRNIGVTGLTVLVPPSAPHCQIQG 153

Query: 484 NQNCRTPDAVELCKKLGG 501
           +Q+  + D + LC    G
Sbjct: 154 SQDIGS-DVILLCSSEEG 170


>gi|62865874 immunoglobulin superfamily, member 11 isoform a [Homo
           sapiens]
          Length = 430

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 424 TVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGAS 483
           T+ +  VSI   N ++SD    GTY  L+N + ++GG       L ++ P +   C    
Sbjct: 96  TMPATNVSIFINNTQLSDT---GTYQCLVNNLPDIGGRNIGVTGLTVLVPPSAPHCQIQG 152

Query: 484 NQNCRTPDAVELCKKLGG 501
           +Q+  + D + LC    G
Sbjct: 153 SQDIGS-DVILLCSSEEG 169


>gi|16306525 cyclin B3 isoform 1 [Homo sapiens]
          Length = 291

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 384 LLLGLEYALLVWWTPKVEHQGGFPIYYYIVVLLSYALHQVTVYSMYVSIMAFNAKVSDPL 443
           LLL L    L +W P +EH  G+ I    +  L   L+++  +S Y S+ A   K S P+
Sbjct: 204 LLLALYMKKLGYWVPFLEHYSGYSISE--LHPLVRQLNKLLTFSSYDSLKAVYYKYSHPV 261


>gi|90669307 cyclin B3 isoform 3 [Homo sapiens]
          Length = 1395

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 384  LLLGLEYALLVWWTPKVEHQGGFPIYYYIVVLLSYALHQVTVYSMYVSIMAFNAKVSDPL 443
            LLL L    L +W P +EH  G+ I    +  L   L+++  +S Y S+ A   K S P+
Sbjct: 1308 LLLALYMKKLGYWVPFLEHYSGYSISE--LHPLVRQLNKLLTFSSYDSLKAVYYKYSHPV 1365


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.140    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,451,942
Number of Sequences: 37866
Number of extensions: 901603
Number of successful extensions: 1718
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1711
Number of HSP's gapped (non-prelim): 9
length of query: 549
length of database: 18,247,518
effective HSP length: 107
effective length of query: 442
effective length of database: 14,195,856
effective search space: 6274568352
effective search space used: 6274568352
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.