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Search of human proteins with 46240862
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46240862 GPI deacylase [Homo sapiens]
(922 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46240862 GPI deacylase [Homo sapiens] 1864 0.0
gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens] 33 1.2
gi|242117946 hypothetical protein LOC57579 isoform c [Homo sapiens] 32 2.1
gi|157671939 hypothetical protein LOC57579 isoform b [Homo sapiens] 32 2.1
gi|157671937 hypothetical protein LOC57579 isoform a [Homo sapiens] 32 2.1
gi|181337167 solute carrier family 7 (cationic amino acid transp... 32 2.1
gi|195927037 DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho... 31 4.6
gi|4503351 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo... 31 4.6
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 30 7.9
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 30 7.9
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 30 7.9
gi|114205410 hypothetical protein LOC51059 [Homo sapiens] 30 7.9
>gi|46240862 GPI deacylase [Homo sapiens]
Length = 922
Score = 1864 bits (4828), Expect = 0.0
Identities = 922/922 (100%), Positives = 922/922 (100%)
Query: 1 MFLHSVNLWNLAFYVFMVFLATLGLWDVFFGFEENKCSMSYMFEYPEYQKIELPKKLAKR 60
MFLHSVNLWNLAFYVFMVFLATLGLWDVFFGFEENKCSMSYMFEYPEYQKIELPKKLAKR
Sbjct: 1 MFLHSVNLWNLAFYVFMVFLATLGLWDVFFGFEENKCSMSYMFEYPEYQKIELPKKLAKR 60
Query: 61 YPAYELYLYGEGSYAEEHKILPLTGIPVLFLPGNAGSYKQVRSIGSIALRKAEDIDFKYH 120
YPAYELYLYGEGSYAEEHKILPLTGIPVLFLPGNAGSYKQVRSIGSIALRKAEDIDFKYH
Sbjct: 61 YPAYELYLYGEGSYAEEHKILPLTGIPVLFLPGNAGSYKQVRSIGSIALRKAEDIDFKYH 120
Query: 121 FDFFSVNFNEELVALYGGSLQKQTKFVHECIKTILKLYKGQEFAPKSVAIIGHSMGGLVA 180
FDFFSVNFNEELVALYGGSLQKQTKFVHECIKTILKLYKGQEFAPKSVAIIGHSMGGLVA
Sbjct: 121 FDFFSVNFNEELVALYGGSLQKQTKFVHECIKTILKLYKGQEFAPKSVAIIGHSMGGLVA 180
Query: 181 RALLTLKNFKHDLINLLITQATPHVAPVMPLDRFITDFYTTVNNYWILNARHINLTTLSV 240
RALLTLKNFKHDLINLLITQATPHVAPVMPLDRFITDFYTTVNNYWILNARHINLTTLSV
Sbjct: 181 RALLTLKNFKHDLINLLITQATPHVAPVMPLDRFITDFYTTVNNYWILNARHINLTTLSV 240
Query: 241 AGGFRDYQVRSGLTFLPKLSHHTSALSVVSSAVPKTWVSTDHLSIVWCKQLQLTTVRAFF 300
AGGFRDYQVRSGLTFLPKLSHHTSALSVVSSAVPKTWVSTDHLSIVWCKQLQLTTVRAFF
Sbjct: 241 AGGFRDYQVRSGLTFLPKLSHHTSALSVVSSAVPKTWVSTDHLSIVWCKQLQLTTVRAFF 300
Query: 301 DLIDADTKQITQNSKKKLSVLYHHFIRHPSKHFEENPAIISDLTGTSMWVLVKVSKWTYV 360
DLIDADTKQITQNSKKKLSVLYHHFIRHPSKHFEENPAIISDLTGTSMWVLVKVSKWTYV
Sbjct: 301 DLIDADTKQITQNSKKKLSVLYHHFIRHPSKHFEENPAIISDLTGTSMWVLVKVSKWTYV 360
Query: 361 AYNESEKIYFTFPLENHRKIYTHVYCQSTMLDTNSWIFACINSTSMCLQGVDLSWKAELL 420
AYNESEKIYFTFPLENHRKIYTHVYCQSTMLDTNSWIFACINSTSMCLQGVDLSWKAELL
Sbjct: 361 AYNESEKIYFTFPLENHRKIYTHVYCQSTMLDTNSWIFACINSTSMCLQGVDLSWKAELL 420
Query: 421 PTIKYLTLRLQDYPSLSHLVVYVPSVRGSKFVVDCEFFKKEKRYIQLPVTHLFSFGLSSR 480
PTIKYLTLRLQDYPSLSHLVVYVPSVRGSKFVVDCEFFKKEKRYIQLPVTHLFSFGLSSR
Sbjct: 421 PTIKYLTLRLQDYPSLSHLVVYVPSVRGSKFVVDCEFFKKEKRYIQLPVTHLFSFGLSSR 480
Query: 481 KVVLNTNGLYYNLELLNFGQIYQAFKINVVSKCSAVKEEITSIYRLHIPWSYEDSLTIAQ 540
KVVLNTNGLYYNLELLNFGQIYQAFKINVVSKCSAVKEEITSIYRLHIPWSYEDSLTIAQ
Sbjct: 481 KVVLNTNGLYYNLELLNFGQIYQAFKINVVSKCSAVKEEITSIYRLHIPWSYEDSLTIAQ 540
Query: 541 APSSTEISLKLHIAQPENNTHVALFKMYTSSDCRYEVTVKTSFSQILGQVVRFHGGALPA 600
APSSTEISLKLHIAQPENNTHVALFKMYTSSDCRYEVTVKTSFSQILGQVVRFHGGALPA
Sbjct: 541 APSSTEISLKLHIAQPENNTHVALFKMYTSSDCRYEVTVKTSFSQILGQVVRFHGGALPA 600
Query: 601 YVVSNILLAYRGQLYSLFSTGCCLEYATMLDKEAKPYKVDPFVIIIKFLLGYKWFKELWD 660
YVVSNILLAYRGQLYSLFSTGCCLEYATMLDKEAKPYKVDPFVIIIKFLLGYKWFKELWD
Sbjct: 601 YVVSNILLAYRGQLYSLFSTGCCLEYATMLDKEAKPYKVDPFVIIIKFLLGYKWFKELWD 660
Query: 661 VLLLPELDAVILTCQSMCFPLISLILFLFGTCTAYWSGLLSSASVRLLSSLWLALKRPSE 720
VLLLPELDAVILTCQSMCFPLISLILFLFGTCTAYWSGLLSSASVRLLSSLWLALKRPSE
Sbjct: 661 VLLLPELDAVILTCQSMCFPLISLILFLFGTCTAYWSGLLSSASVRLLSSLWLALKRPSE 720
Query: 721 LPKDIKMISPDLPFLTIVLIIVSWTTCGALAILLSYLYYVFKVVHLQASLTTFKNSQPVN 780
LPKDIKMISPDLPFLTIVLIIVSWTTCGALAILLSYLYYVFKVVHLQASLTTFKNSQPVN
Sbjct: 721 LPKDIKMISPDLPFLTIVLIIVSWTTCGALAILLSYLYYVFKVVHLQASLTTFKNSQPVN 780
Query: 781 PKHSRRSEKKSNHHKDSSIHHLRLSANDAEDSLRMHSTVINLLTWIVLLSMPSLIYWLKN 840
PKHSRRSEKKSNHHKDSSIHHLRLSANDAEDSLRMHSTVINLLTWIVLLSMPSLIYWLKN
Sbjct: 781 PKHSRRSEKKSNHHKDSSIHHLRLSANDAEDSLRMHSTVINLLTWIVLLSMPSLIYWLKN 840
Query: 841 LRYYFKLNPDPCKPLAFILIPTMAILGNTYTVSIKSSKLLKTTSQFPLPLAVGVIAFGSA 900
LRYYFKLNPDPCKPLAFILIPTMAILGNTYTVSIKSSKLLKTTSQFPLPLAVGVIAFGSA
Sbjct: 841 LRYYFKLNPDPCKPLAFILIPTMAILGNTYTVSIKSSKLLKTTSQFPLPLAVGVIAFGSA 900
Query: 901 HLYRLPCFVFIPLLLHALCNFM 922
HLYRLPCFVFIPLLLHALCNFM
Sbjct: 901 HLYRLPCFVFIPLLLHALCNFM 922
>gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]
Length = 4857
Score = 33.1 bits (74), Expect = 1.2
Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 21/279 (7%)
Query: 533 EDSLTIAQAPSSTEISLKLHIAQPE-NNTHVAL--FKMYTSSDCRYEVTVKTSFSQILGQ 589
EDS + ++ L+L++A VAL + S E ++TS ++ L
Sbjct: 1966 EDSRVFSAYQDCIQLQLQLNLAHNAVQRLKVALGASRKMLSETSNPEDLIQTSSTEQLRT 2025
Query: 590 VVRFHGGALPAYVVSNILLAYRGQLYSLFSTGCCLEYATMLDKEAKP-YKVDPFVIIIKF 648
++R+ L + + ++ + L S F C E L P ++ +++++
Sbjct: 2026 IIRYLLDTLLSLLHASNGHSVPAVLQSTFHAQACEELFKHLCISGTPKIRLHTGLLLVQL 2085
Query: 649 LLGYKWFKELWDVLLLPELDAVILTCQSMCFPL--ISLILFLFGTCTAYWSGLLSSASVR 706
G +W W L L + + Q + FP + ++L G + SG+L S +
Sbjct: 2086 CGGERW----WGQFLSNVLQELYNSEQLLIFPQDRVFMLLSCIGQRSLSNSGVLESL-LN 2140
Query: 707 LLSSLW------LALKRPSELPKDIKMISPDLPFLTIVLIIVSWTTCGALAILL----SY 756
LL +L L + R +E DI MIS + ++ +L V+ A A +
Sbjct: 2141 LLDNLLSPLQPQLPMHRRTEGVLDIPMISWVVMLVSRLLDYVATVEDEAAAAKKPLNGNQ 2200
Query: 757 LYYVFKVVHLQASLTTFKNSQPVNPKHSRRSEKKSNHHK 795
++ +H Q+ + K S ++ +SR+ K+ HHK
Sbjct: 2201 WSFINNNLHTQSLNRSSKGSSSLDRLYSRKIRKQLVHHK 2239
>gi|242117946 hypothetical protein LOC57579 isoform c [Homo sapiens]
Length = 1515
Score = 32.3 bits (72), Expect = 2.1
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 168 VAIIGHSMGGLVARALLTLKNFKHDL--INLLITQATPHV 205
++ IGHS+G L+ R++LT FK+ L ++ ++ + PH+
Sbjct: 1321 ISFIGHSLGNLIIRSVLTRPRFKYYLNKLHTFLSLSGPHL 1360
>gi|157671939 hypothetical protein LOC57579 isoform b [Homo sapiens]
Length = 1302
Score = 32.3 bits (72), Expect = 2.1
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 168 VAIIGHSMGGLVARALLTLKNFKHDL--INLLITQATPHV 205
++ IGHS+G L+ R++LT FK+ L ++ ++ + PH+
Sbjct: 1108 ISFIGHSLGNLIIRSVLTRPRFKYYLNKLHTFLSLSGPHL 1147
>gi|157671937 hypothetical protein LOC57579 isoform a [Homo sapiens]
Length = 1319
Score = 32.3 bits (72), Expect = 2.1
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 168 VAIIGHSMGGLVARALLTLKNFKHDL--INLLITQATPHV 205
++ IGHS+G L+ R++LT FK+ L ++ ++ + PH+
Sbjct: 1125 ISFIGHSLGNLIIRSVLTRPRFKYYLNKLHTFLSLSGPHL 1164
>gi|181337167 solute carrier family 7 (cationic amino acid
transporter, y+ system), member 14 [Homo sapiens]
Length = 771
Score = 32.3 bits (72), Expect = 2.1
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 676 SMCFPLISLILFLFGTCT----------AYWSGLLSSASVRLLSSLWLALKRPSELPKDI 725
++C L+ +++F+F + ++W+ LL V L+S+L + + E PK +
Sbjct: 566 TICVLLLFILMFIFCSFIIFGSDYISEQSWWAILLVVLMVLLISTLVFVILQQPENPKKL 625
Query: 726 KMISPDLPFLTIVLIIVS 743
++P LPF+ ++V+
Sbjct: 626 PYMAPCLPFVPAFAMLVN 643
>gi|195927037 DNA (cytosine-5-)-methyltransferase 1 isoform a [Homo
sapiens]
Length = 1632
Score = 31.2 bits (69), Expect = 4.6
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 234 NLTTLSVAGGFRDYQVRSGLTFLPKLSHHTSALSVVSSAVPKTW 277
N+T LS +G FR VR ++ LP++ + SAL + + P++W
Sbjct: 1369 NITRLS-SGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSW 1411
>gi|4503351 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo
sapiens]
Length = 1616
Score = 31.2 bits (69), Expect = 4.6
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 234 NLTTLSVAGGFRDYQVRSGLTFLPKLSHHTSALSVVSSAVPKTW 277
N+T LS +G FR VR ++ LP++ + SAL + + P++W
Sbjct: 1353 NITRLS-SGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSW 1395
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 30.4 bits (67), Expect = 7.9
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 554 AQPENNTHVALFKMYTSSDCRYEVTVKTSFSQILGQVVRFHGGALPAYVVSNI-LLAYRG 612
+ P + L K+Y C + +T Q + + FH A Y +NI + G
Sbjct: 524 SSPYPQEYSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWFHPPANEIYRKNNISVFEVDG 583
Query: 613 QLYSLFSTGCCLEYATMLDKEAKPYKVDPFVIII 646
+ +++ CL LD + Y V+PF+ +
Sbjct: 584 NVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYV 617
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 30.4 bits (67), Expect = 7.9
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 554 AQPENNTHVALFKMYTSSDCRYEVTVKTSFSQILGQVVRFHGGALPAYVVSNI-LLAYRG 612
+ P + L K+Y C + +T Q + + FH A Y +NI + G
Sbjct: 524 SSPYPQEYSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWFHPPANEIYRKNNISVFEVDG 583
Query: 613 QLYSLFSTGCCLEYATMLDKEAKPYKVDPFVIII 646
+ +++ CL LD + Y V+PF+ +
Sbjct: 584 NVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYV 617
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 30.4 bits (67), Expect = 7.9
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 554 AQPENNTHVALFKMYTSSDCRYEVTVKTSFSQILGQVVRFHGGALPAYVVSNI-LLAYRG 612
+ P + L K+Y C + +T Q + + FH A Y +NI + G
Sbjct: 524 SSPYPQEYSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWFHPPANEIYRKNNISVFEVDG 583
Query: 613 QLYSLFSTGCCLEYATMLDKEAKPYKVDPFVIII 646
+ +++ CL LD + Y V+PF+ +
Sbjct: 584 NVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYV 617
>gi|114205410 hypothetical protein LOC51059 [Homo sapiens]
Length = 1406
Score = 30.4 bits (67), Expect = 7.9
Identities = 12/40 (30%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 168 VAIIGHSMGGLVARALLTLKNFKHDL--INLLITQATPHV 205
++ IGHS+G ++ R++LT F++ L ++ ++ + PH+
Sbjct: 1212 ISFIGHSLGNIIIRSVLTRPRFRYYLNKLHTFLSLSGPHL 1251
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.138 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,395,197
Number of Sequences: 37866
Number of extensions: 1430413
Number of successful extensions: 4206
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 4198
Number of HSP's gapped (non-prelim): 15
length of query: 922
length of database: 18,247,518
effective HSP length: 112
effective length of query: 810
effective length of database: 14,006,526
effective search space: 11345286060
effective search space used: 11345286060
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.