Search of human proteins with 46195794

Search of human proteins with 46195794

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|46195794 poly (ADP-ribose) polymerase family, member 16
[Homo sapiens]
         (323 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|46195794 poly (ADP-ribose) polymerase family, member 16 [Homo...   662   0.0  
gi|94536838 poly (ADP-ribose) polymerase family, member 6 [Homo ...    59   8e-09
gi|24432009 poly (ADP-ribose) polymerase family, member 8 [Homo ...    53   3e-07
gi|13569938 sialyltransferase 7E [Homo sapiens]                        30   2.2  
gi|110825963 poly (ADP-ribose) polymerase family, member 2 isofo...    30   2.9  
gi|110825961 poly (ADP-ribose) polymerase family, member 2 isofo...    30   2.9  
gi|13569934 sperm acrosome associated 1 [Homo sapiens]                 29   6.5  
gi|195972892 fatty acid amide hydrolase 2 [Homo sapiens]               29   6.5  
gi|48375167 microtubule-associated protein 6 isoform 2 [Homo sap...    29   6.5  
gi|48375173 microtubule-associated protein 6 isoform 1 [Homo sap...    29   6.5  

>gi|46195794 poly (ADP-ribose) polymerase family, member 16 [Homo
           sapiens]
          Length = 323

 Score =  662 bits (1707), Expect = 0.0
 Identities = 323/323 (100%), Positives = 323/323 (100%)

Query: 1   MQPSGWAAAREAAGRDMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDCKDFEALLA 60
           MQPSGWAAAREAAGRDMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDCKDFEALLA
Sbjct: 1   MQPSGWAAAREAAGRDMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDCKDFEALLA 60

Query: 61  DASKLPNLKELLQSSGDNHKRAWDLVSWILSSKVLTIHSAGKAEFEKIQKLTGAPHTPVP 120
           DASKLPNLKELLQSSGDNHKRAWDLVSWILSSKVLTIHSAGKAEFEKIQKLTGAPHTPVP
Sbjct: 61  DASKLPNLKELLQSSGDNHKRAWDLVSWILSSKVLTIHSAGKAEFEKIQKLTGAPHTPVP 120

Query: 121 APDFLFEIEYFDPANAKFYETKGERDLIYAFHGSRLENFHSIIHNGLHCHLNKTSLFGEG 180
           APDFLFEIEYFDPANAKFYETKGERDLIYAFHGSRLENFHSIIHNGLHCHLNKTSLFGEG
Sbjct: 121 APDFLFEIEYFDPANAKFYETKGERDLIYAFHGSRLENFHSIIHNGLHCHLNKTSLFGEG 180

Query: 181 TYLTSDLSLALIYSPHGHGWQHSLLGPILSCVAVCEVIDHPDVKCQTKKKDSKEIDRRRA 240
           TYLTSDLSLALIYSPHGHGWQHSLLGPILSCVAVCEVIDHPDVKCQTKKKDSKEIDRRRA
Sbjct: 181 TYLTSDLSLALIYSPHGHGWQHSLLGPILSCVAVCEVIDHPDVKCQTKKKDSKEIDRRRA 240

Query: 241 RIKHSEGGDIPPKYFVVTNNQLLRVKYLLVYSQKPPKSRASSQLSWFSSHWFTVMISLYL 300
           RIKHSEGGDIPPKYFVVTNNQLLRVKYLLVYSQKPPKSRASSQLSWFSSHWFTVMISLYL
Sbjct: 241 RIKHSEGGDIPPKYFVVTNNQLLRVKYLLVYSQKPPKSRASSQLSWFSSHWFTVMISLYL 300

Query: 301 LLLLIVSVINSSAFQHFWNRAKR 323
           LLLLIVSVINSSAFQHFWNRAKR
Sbjct: 301 LLLLIVSVINSSAFQHFWNRAKR 323


>gi|94536838 poly (ADP-ribose) polymerase family, member 6 [Homo
           sapiens]
          Length = 630

 Score = 58.5 bits (140), Expect = 8e-09
 Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 59/265 (22%)

Query: 7   AAAREAAGRDMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDCK---------DFEA 57
           AA   A G +++  DL  ++  +AL+S ++  +  P+P+     D K         ++E 
Sbjct: 324 AAEEVATGAEVV--DLLVAMCRAALESPRKSIIFEPYPSVVDPTDPKTLAFNPKKKNYER 381

Query: 58  LLADASKLPNLKELLQSSGDNHKRAWDLVSWILSSKVLTIHSAGKAEFEKIQKLTGAPHT 117
           L      + +++E+ Q S    K+  D +  +    +  I S+ ++   K+         
Sbjct: 382 LQKALDSVMSIREMTQGSYLEIKKQMDKLDPLAHPLLQWIISSNRSHIVKL--------- 432

Query: 118 PVPAPDFLFEIEYF-----DPAN-AKFYETKGERDLIYAFHGSRLENFHSIIHNGL-HCH 170
           P+    F+     F      PA  A+F   K      +AFHGS +EN+HSI+ NGL +  
Sbjct: 433 PLSRLKFMHTSHQFLLLSSPPAKEARFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNAS 492

Query: 171 LNKTSL----FGEGTYLTSDLSLALIYSPHGHGWQHS----------------------- 203
             K  L    +G+G YL+   S++  YS  G G QH                        
Sbjct: 493 YTKLQLHGAAYGKGIYLSPISSISFGYSGMGKG-QHRMPSKDELVQRYNRMNTIPQTRSI 551

Query: 204 ----LLGPILSCVAVCEVIDHPDVK 224
               L    L+C+A+CEVI   D++
Sbjct: 552 QSRFLQSRNLNCIALCEVITSKDLQ 576


>gi|24432009 poly (ADP-ribose) polymerase family, member 8 [Homo
           sapiens]
          Length = 854

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 65/266 (24%), Positives = 105/266 (39%), Gaps = 62/266 (23%)

Query: 7   AAAREAAGRDMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDC---------KDFEA 57
           AA   A G  ++  DL  S+  SAL+S ++  +  P+P+     D          K+++ 
Sbjct: 547 AADEIATGAQVV--DLLVSMCRSALESPRKVVIFEPYPSVVDPNDPQMLAFNPRKKNYDR 604

Query: 58  LLADASKLPNLKELLQSSGDNHKRAWD--------LVSWILSSKVLTIHSAGKAEFEKIQ 109
           ++     + +++E+ Q+     K+  D        L+ W++SS    I    K    +  
Sbjct: 605 VMKALDSITSIREMTQAPYLEIKKQMDKQDPLAHPLLQWVISSNRSHIV---KLPVNRQL 661

Query: 110 KLTGAPHTPVPAPDFLFEIEYFDPAN-AKFYETKGERDLIYAFHGSRLENFHSIIHNGLH 168
           K    PH         F +    PA  + F   K      +AFHGS +EN+HSI+ NGL 
Sbjct: 662 KFMHTPHQ--------FLLLSSPPAKESNFRAAKKLFGSTFAFHGSHIENWHSILRNGLV 713

Query: 169 CHLNKT-----SLFGEGTYLTSDLSLALIYS-------------------------PHGH 198
              N       +++G G YL+   S++  YS                             
Sbjct: 714 VASNTRLQLHGAMYGSGIYLSPMSSISFGYSGMNKKQKVSAKDEPASSSKSSNTSQSQKK 773

Query: 199 GWQHSLL-GPILSCVAVCEVIDHPDV 223
           G Q   L    L C+A+CEVI   D+
Sbjct: 774 GQQSQFLQSRNLKCIALCEVITSSDL 799


>gi|13569938 sialyltransferase 7E [Homo sapiens]
          Length = 336

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 253 KYFVVTNNQLLRVKYLLVYSQKPPKSRASSQLSWFSSHWFTVMISLYL 300
           K F++T +++L+   L  + Q+  K R  S  +W S+ WFT+ I+L L
Sbjct: 200 KAFMITRHKMLQFDEL--FKQETGKDRKISN-TWLSTGWFTMTIALEL 244


>gi|110825963 poly (ADP-ribose) polymerase family, member 2 isoform
           2 [Homo sapiens]
          Length = 570

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 15/95 (15%)

Query: 104 EFEKIQKLTGAPHTPVPAPDF------LFEIEYFDPANAKFYETKGERDLIYAFHGSRLE 157
           EF+ I +   + H P  + D+      LFE+E  D     F E    R L++  HGSR+ 
Sbjct: 365 EFKVISQYLQSTHAPTHS-DYTMTLLDLFEVEK-DGEKEAFREDLHNRMLLW--HGSRMS 420

Query: 158 NFHSIIHNGLHCHLNKTS----LFGEGTYLTSDLS 188
           N+  I+ +GL     +      +FG+G Y  +D+S
Sbjct: 421 NWVGILSHGLRIAPPEAPITGYMFGKGIYF-ADMS 454


>gi|110825961 poly (ADP-ribose) polymerase family, member 2 isoform
           1 [Homo sapiens]
          Length = 583

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 15/95 (15%)

Query: 104 EFEKIQKLTGAPHTPVPAPDF------LFEIEYFDPANAKFYETKGERDLIYAFHGSRLE 157
           EF+ I +   + H P  + D+      LFE+E  D     F E    R L++  HGSR+ 
Sbjct: 378 EFKVISQYLQSTHAPTHS-DYTMTLLDLFEVEK-DGEKEAFREDLHNRMLLW--HGSRMS 433

Query: 158 NFHSIIHNGLHCHLNKTS----LFGEGTYLTSDLS 188
           N+  I+ +GL     +      +FG+G Y  +D+S
Sbjct: 434 NWVGILSHGLRIAPPEAPITGYMFGKGIYF-ADMS 467


>gi|13569934 sperm acrosome associated 1 [Homo sapiens]
          Length = 294

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 259 NNQLLRVKYLLVYSQKPPKSRASSQLSWFSSHWFT----VMISLYLLLLLIVSVINSSAF 314
           NN+++      VY+    + R SS  +  ++  F     V+I ++++ LLI  +IN +A 
Sbjct: 188 NNEIVATIKFTVYTSSELQMRRSSLPATDAALIFVLTIGVIICVFIIFLLIFIIINWAAV 247

Query: 315 QHFW 318
           + FW
Sbjct: 248 KAFW 251


>gi|195972892 fatty acid amide hydrolase 2 [Homo sapiens]
          Length = 532

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 70  ELLQSSGDNHKRAWDLVSWILSSKVLTIHSAGKAEFEK 107
           +LL   G +    W+L+ W L   V TI S G A  E+
Sbjct: 379 DLLGDHGKHVSPLWELIKWCLGLSVYTIPSIGLALLEE 416


>gi|48375167 microtubule-associated protein 6 isoform 2 [Homo
           sapiens]
          Length = 439

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 11/51 (21%)

Query: 231 DSKEIDRRRARIKHSEGGDIPPKYFVVTNNQLLRVKYLLVYSQKPPKSRAS 281
           D+K IDRRR R  +SE    PPK           V+   V S KP K+ AS
Sbjct: 351 DNKVIDRRRIRSLYSEPFKEPPK-----------VEKPSVQSSKPKKTSAS 390


>gi|48375173 microtubule-associated protein 6 isoform 1 [Homo
           sapiens]
          Length = 813

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 11/51 (21%)

Query: 231 DSKEIDRRRARIKHSEGGDIPPKYFVVTNNQLLRVKYLLVYSQKPPKSRAS 281
           D+K IDRRR R  +SE    PPK           V+   V S KP K+ AS
Sbjct: 351 DNKVIDRRRIRSLYSEPFKEPPK-----------VEKPSVQSSKPKKTSAS 390


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,902,089
Number of Sequences: 37866
Number of extensions: 579905
Number of successful extensions: 1254
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1246
Number of HSP's gapped (non-prelim): 12
length of query: 323
length of database: 18,247,518
effective HSP length: 102
effective length of query: 221
effective length of database: 14,385,186
effective search space: 3179126106
effective search space used: 3179126106
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.