Guide to the Human Genome
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Name: VKORC1 Sequence: fasta or formatted (92aa) NCBI GI: 45827739
Description:

vitamin K epoxide reductase complex, subunit 1 isoform 2

Referenced in:

Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Other entries for this name:
alt prot [163aa] vitamin K epoxide reductase complex, subunit 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.0         11           2
 C cysteine            5.4          5           1
 D aspartate           6.5          6           1
 E glutamate           1.1          1           1
 F phenylalanine       2.2          2           1
 G glycine             8.7          8           1
 H histidine           1.1          1           1
 I isoleucine          1.1          1           1
 K lysine              1.1          1           1
 L leucine            17.4         16           1
 M methionine          1.1          1           1
 N asparagine          0.0          0           0
 P proline             6.5          6           1
 Q glutamine           0.0          0           0
 R arginine            9.8          9           1
 S serine              8.7          8           2
 T threonine           4.3          4           1
 V valine              7.6          7           1
 W tryptophan          3.3          3           1
 Y tyrosine            2.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   vitamin K epoxide reductase complex, subunit 1 isofo... 
VKORC1                0.571   vitamin K epoxide reductase complex, subunit 1 isofo...
VKORC1L1              0.173   vitamin K epoxide reductase complex, subunit 1-like ...
LOC100290023          0.024   PREDICTED: hypothetical protein XP_002348147 
LOC100128081          0.006   PREDICTED: hypothetical protein 
LOC100128081          0.006   PREDICTED: hypothetical protein 
LOC100128081          0.006   PREDICTED: hypothetical protein 
LOC100128081          0.006   PREDICTED: hypothetical protein 
STAB2                 0.006   stabilin 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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