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Search of human proteins with 13129114
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13129114 alpha-1,6-mannosyltransferase ALG12 [Homo sapiens]
(488 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13129114 alpha-1,6-mannosyltransferase ALG12 [Homo sapiens] 985 0.0
gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens] 80 5e-15
gi|118026921 asparagine-linked glycosylation 9 protein isoform a... 56 6e-08
gi|118026933 asparagine-linked glycosylation 9 protein isoform b... 56 8e-08
gi|118026937 asparagine-linked glycosylation 9 protein isoform c... 44 4e-04
gi|118026935 asparagine-linked glycosylation 9 protein isoform d... 43 6e-04
gi|120587023 down-regulated in metastasis [Homo sapiens] 30 6.5
gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name... 30 6.5
gi|5902084 silver homolog [Homo sapiens] 30 6.5
>gi|13129114 alpha-1,6-mannosyltransferase ALG12 [Homo sapiens]
Length = 488
Score = 985 bits (2547), Expect = 0.0
Identities = 488/488 (100%), Positives = 488/488 (100%)
Query: 1 MAGKGSSGRRPLLLGLLVAVATVHLVICPYTKVEESFNLQATHDLLYHWQDLEQYDHLEF 60
MAGKGSSGRRPLLLGLLVAVATVHLVICPYTKVEESFNLQATHDLLYHWQDLEQYDHLEF
Sbjct: 1 MAGKGSSGRRPLLLGLLVAVATVHLVICPYTKVEESFNLQATHDLLYHWQDLEQYDHLEF 60
Query: 61 PGVVPRTFLGPVVIAVFSSPAVYVLSLLEMSKFYSQLIVRGVLGLGVIFGLWTLQKEVRR 120
PGVVPRTFLGPVVIAVFSSPAVYVLSLLEMSKFYSQLIVRGVLGLGVIFGLWTLQKEVRR
Sbjct: 61 PGVVPRTFLGPVVIAVFSSPAVYVLSLLEMSKFYSQLIVRGVLGLGVIFGLWTLQKEVRR 120
Query: 121 HFGAMVATMFCWVTAMQFHLMFYCTRTLPNVLALPVVLLALAAWLRHEWARFIWLSAFAI 180
HFGAMVATMFCWVTAMQFHLMFYCTRTLPNVLALPVVLLALAAWLRHEWARFIWLSAFAI
Sbjct: 121 HFGAMVATMFCWVTAMQFHLMFYCTRTLPNVLALPVVLLALAAWLRHEWARFIWLSAFAI 180
Query: 181 IVFRVELCLFLGLLLLLALGNRKVSVVRALRHAVPAGILCLGLTVAVDSYFWRQLTWPEG 240
IVFRVELCLFLGLLLLLALGNRKVSVVRALRHAVPAGILCLGLTVAVDSYFWRQLTWPEG
Sbjct: 181 IVFRVELCLFLGLLLLLALGNRKVSVVRALRHAVPAGILCLGLTVAVDSYFWRQLTWPEG 240
Query: 241 KVLWYNTVLNKSSNWGTSPLLWYFYSALPRGLGCSLLFIPLGLVDRRTHAPTVLALGFMA 300
KVLWYNTVLNKSSNWGTSPLLWYFYSALPRGLGCSLLFIPLGLVDRRTHAPTVLALGFMA
Sbjct: 241 KVLWYNTVLNKSSNWGTSPLLWYFYSALPRGLGCSLLFIPLGLVDRRTHAPTVLALGFMA 300
Query: 301 LYSLLPHKELRFIIYAFPMLNITAARGCSYLLNNYKKSWLYKAGSLLVIGHLVVNAAYSA 360
LYSLLPHKELRFIIYAFPMLNITAARGCSYLLNNYKKSWLYKAGSLLVIGHLVVNAAYSA
Sbjct: 301 LYSLLPHKELRFIIYAFPMLNITAARGCSYLLNNYKKSWLYKAGSLLVIGHLVVNAAYSA 360
Query: 361 TALYVSHFNYPGGVAMQRLHQLVPPQTDVLLHIDVAAAQTGVSRFLQVNSAWRYDKREDV 420
TALYVSHFNYPGGVAMQRLHQLVPPQTDVLLHIDVAAAQTGVSRFLQVNSAWRYDKREDV
Sbjct: 361 TALYVSHFNYPGGVAMQRLHQLVPPQTDVLLHIDVAAAQTGVSRFLQVNSAWRYDKREDV 420
Query: 421 QPGTGMLAYTHILMEAAPGLLALYRDTHRVLASVVGTTGVSLNLTQLPPFNVHLQTKLVL 480
QPGTGMLAYTHILMEAAPGLLALYRDTHRVLASVVGTTGVSLNLTQLPPFNVHLQTKLVL
Sbjct: 421 QPGTGMLAYTHILMEAAPGLLALYRDTHRVLASVVGTTGVSLNLTQLPPFNVHLQTKLVL 480
Query: 481 LERLPRPS 488
LERLPRPS
Sbjct: 481 LERLPRPS 488
>gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens]
Length = 554
Score = 79.7 bits (195), Expect = 5e-15
Identities = 98/377 (25%), Positives = 160/377 (42%), Gaps = 58/377 (15%)
Query: 6 SSGRRPLLLG--LLVAVATVHLVICPYTKVEESFNLQATHDLLYHWQDLEQYDHLEFP-G 62
S+ RR LLG + + + T+ L I V+ SF +WQ LE H+ F G
Sbjct: 49 SARRRGDLLGENIYLLLFTIALRILNCFLVQTSFVPDE------YWQSLEVSHHMVFNYG 102
Query: 63 VVP-------RTFLGPVVIAVFSSPAVYVLSLLEMSKFYSQLIV------RGVLGLGVIF 109
+ R++ P++ A ++Y + L + K QL++ + +L
Sbjct: 103 YLTWEWTERLRSYTYPLIFA-----SIYKILHL-LGKDSVQLLIWIPRLAQALLSAVADV 156
Query: 110 GLWTLQKEVRRH------FGAMVATMFCWVTAMQFHLMFYCTRTLPNVLALPVVLLALAA 163
L++L K++ F + + F W + CTRTL N + + ++AL
Sbjct: 157 RLYSLMKQLENQEVARWVFFCQLCSWFTW---------YCCTRTLTNTMETVLTIIALFY 207
Query: 164 WLRH-----EWARFIWLSAFAIIVFRVELCLFLGLLLL-LALGNRKVSVVRALRHAVPAG 217
+ ++ L A A I+ + L+ LL RK+ ++ L H +P G
Sbjct: 208 YPLEGSKSMNSVKYSSLVALAFIIRPTAVILWTPLLFRHFCQEPRKLDLI--LHHFLPVG 265
Query: 218 ILCLGLTVAVDSYFWRQLTWPEGKVLWYNTVLNKSSNWGTSPLLWYFYSALPRGLGCSLL 277
+ L L++ +D F+ Q T + L +N + N + +G+ P WYF P LG L
Sbjct: 266 FVTLSLSLMIDRIFFGQWTLVQFNFLKFNVLQNWGTFYGSHPWHWYFSQGFPVILGTHLP 325
Query: 278 FIPLG--LVDRRTHAPTVLALGFMALYSLLPHKELRFIIYAFPMLNITAARGCSYLLNNY 335
F G L +R V L + +YS+L HKE RFI P + C Y L +
Sbjct: 326 FFIHGCYLAPKRYRILLVTVLWTLLVYSMLSHKEFRFIYPVLPFCMVF----CGYSL-TH 380
Query: 336 KKSWLYKAGSLLVIGHL 352
K+W A S L + +L
Sbjct: 381 LKTWKKPALSFLFLSNL 397
>gi|118026921 asparagine-linked glycosylation 9 protein isoform a
[Homo sapiens]
Length = 618
Score = 56.2 bits (134), Expect = 6e-08
Identities = 84/363 (23%), Positives = 148/363 (40%), Gaps = 52/363 (14%)
Query: 2 AGKGSSGRRPLLLGLLVAVATVHLVICPYTKVEESFNL-QATHDLLYHWQDLEQYDHLEF 60
A +GS+ + LL L A ++ C +E+FN + TH L+Y E + E+
Sbjct: 55 APEGSTAFKCLLSARLCAALLSNISDC-----DETFNYWEPTHYLIYG----EGFQTWEY 105
Query: 61 -PGVVPRTFLGPVVIAVFSSPAVYVLSLLEMSKFYSQLIVRGVLGLGVIFGLWTLQKEVR 119
P R++ + + + PA + +L+ +K +R +L K V
Sbjct: 106 SPAYAIRSY---AYLLLHAWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVC 162
Query: 120 RHFGAMVATMFCWVTAMQFHLMFYCTRTLPNVLALPVVLLALAAWLRHEWARFIWLSAFA 179
+ FG V+ M + + + LP+ + L+A+ W ++ +
Sbjct: 163 KKFGLHVSRMMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGW---------YMDKTS 213
Query: 180 IIVFRVELCLFLGLLLLLALGNRKVSVVRALRH--------AVPAGILCLGLTVAVDSYF 231
I V V LG ALG + ++H ++ A IL L V +DSY+
Sbjct: 214 IAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYY 273
Query: 232 WRQLTWPEGKVLWYNTVLNKSSN-WGTSPLLWYFYSA-----LPRGLGCSLLFIPL-GLV 284
+ +L ++ YN + +GT P WYFY +LL +PL L+
Sbjct: 274 YGKLVIAPLNIVLYNVFTPHGPDLYGTEP--WYFYLINGFLNFNVAFALALLVLPLTSLM 331
Query: 285 D---RRTHA-----PTVLALGFMALYSLL----PHKELRFIIYAFPMLNITAARGCSYLL 332
+ +R H P L L M ++ ++ PHKE RF+ +P++ + A S L
Sbjct: 332 EYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQ 391
Query: 333 NNY 335
+++
Sbjct: 392 HSF 394
>gi|118026933 asparagine-linked glycosylation 9 protein isoform b
[Homo sapiens]
Length = 611
Score = 55.8 bits (133), Expect = 8e-08
Identities = 85/363 (23%), Positives = 146/363 (40%), Gaps = 52/363 (14%)
Query: 2 AGKGSSGRRPLLLGLLVAVATVHLVICPYTKVEESFNL-QATHDLLYHWQDLEQYDHLEF 60
A +GS+ + LL L A ++ C +E+FN + TH L+Y E + E+
Sbjct: 55 APEGSTAFKCLLSARLCAALLSNISDC-----DETFNYWEPTHYLIYG----EGFQTWEY 105
Query: 61 -PGVVPRTFLGPVVIAVFSSPAVYVLSLLEMSKFYSQLIVRGVLGLGVIFGLWTLQKEVR 119
P R++ + + + PA + +L+ +K +R +L K V
Sbjct: 106 SPAYAIRSY---AYLLLHAWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVC 162
Query: 120 RHFGAMVATMFCWVTAMQFHLMFYCTRTLPNVLALPVVLLALAAWLRHEWARFIWLSAFA 179
+ FG V+ M + + + LP+ + L+A+ W ++ +
Sbjct: 163 KKFGLHVSRMMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGW---------YMDKTS 213
Query: 180 IIVFRVELCLFLGLLLLLALGNRKVSVVRALRH--------AVPAGILCLGLTVAVDSYF 231
I V V LG ALG + ++H ++ A IL L V +DSY+
Sbjct: 214 IAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYY 273
Query: 232 WRQLTWPEGKVLWYNTVLNKSSN-WGTSPLLWYFYSA-----LPRGLGCSLLFIPL-GLV 284
+ +L ++ YN + +GT P WYFY +LL +PL L+
Sbjct: 274 YGKLVIAPLNIVLYNVFTPHGPDLYGTEP--WYFYLINGFLNFNVAFALALLVLPLTSLM 331
Query: 285 D---RRTHA-----PTVLALGFMALYSLL----PHKELRFIIYAFPMLNITAARGCSYLL 332
+ +R H P L L M ++ ++ PHKE RF+ +P++ + A S L
Sbjct: 332 EYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQ 391
Query: 333 NNY 335
Y
Sbjct: 392 KCY 394
>gi|118026937 asparagine-linked glycosylation 9 protein isoform c
[Homo sapiens]
Length = 447
Score = 43.5 bits (101), Expect = 4e-04
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 38/215 (17%)
Query: 148 LPNVLALPVVLLALAAWLRHEWARFIWLSAFAIIVFRVELCLFLGLLLLLALGNRKVSVV 207
LP+ + L+A+ W ++ +I V V LG ALG +
Sbjct: 20 LPSSFCMYTTLIAMTGW---------YMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDL 70
Query: 208 RALRH--------AVPAGILCLGLTVAVDSYFWRQLTWPEGKVLWYNTVLNKSSN-WGTS 258
++H ++ A IL L V +DSY++ +L ++ YN + +GT
Sbjct: 71 LVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTE 130
Query: 259 PLLWYFYSA-----LPRGLGCSLLFIPL-GLVD---RRTHA-----PTVLALGFMALYSL 304
P WYFY +LL +PL L++ +R H P L L M ++ +
Sbjct: 131 P--WYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFI 188
Query: 305 L----PHKELRFIIYAFPMLNITAARGCSYLLNNY 335
+ PHKE RF+ +P++ + A S L +++
Sbjct: 189 IFFIQPHKEERFLFPVYPLICLCGAVALSALQHSF 223
>gi|118026935 asparagine-linked glycosylation 9 protein isoform d
[Homo sapiens]
Length = 440
Score = 43.1 bits (100), Expect = 6e-04
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 38/215 (17%)
Query: 148 LPNVLALPVVLLALAAWLRHEWARFIWLSAFAIIVFRVELCLFLGLLLLLALGNRKVSVV 207
LP+ + L+A+ W ++ +I V V LG ALG +
Sbjct: 20 LPSSFCMYTTLIAMTGW---------YMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDL 70
Query: 208 RALRH--------AVPAGILCLGLTVAVDSYFWRQLTWPEGKVLWYNTVLNKSSN-WGTS 258
++H ++ A IL L V +DSY++ +L ++ YN + +GT
Sbjct: 71 LVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTE 130
Query: 259 PLLWYFYSA-----LPRGLGCSLLFIPL-GLVD---RRTHA-----PTVLALGFMALYSL 304
P WYFY +LL +PL L++ +R H P L L M ++ +
Sbjct: 131 P--WYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFI 188
Query: 305 L----PHKELRFIIYAFPMLNITAARGCSYLLNNY 335
+ PHKE RF+ +P++ + A S L Y
Sbjct: 189 IFFIQPHKEERFLFPVYPLICLCGAVALSALQKCY 223
>gi|120587023 down-regulated in metastasis [Homo sapiens]
Length = 2785
Score = 29.6 bits (65), Expect = 6.5
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 17/130 (13%)
Query: 202 RKVSVVRALRHAVPAGILCLGLTVAVDSYFWRQLTWPEGKVLWYN-----TVLNKSSNWG 256
RKVS + + PA + C + + Y L +P G L N LN G
Sbjct: 2246 RKVSKLAVSAQSEPARVQCRQVFL---KYI---LDYPLGDKLRPNLEFMLAQLNYEHETG 2299
Query: 257 ---TSPLLWYFYSALPRGL---GCSLLFIPLGLVDRRTHAPTVLALGFMALYSLLPHKEL 310
T ++ Y + P+GL C + FIPL L+ + T + M + SLL L
Sbjct: 2300 RESTLEMIAYLFDTFPQGLLHENCGMFFIPLCLMTINDDSATCKKMASMTIKSLLGKISL 2359
Query: 311 RFIIYAFPML 320
+ F M+
Sbjct: 2360 EKKDWLFDMV 2369
>gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name
family member (tag-184) [Homo sapiens]
Length = 2785
Score = 29.6 bits (65), Expect = 6.5
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 17/130 (13%)
Query: 202 RKVSVVRALRHAVPAGILCLGLTVAVDSYFWRQLTWPEGKVLWYN-----TVLNKSSNWG 256
RKVS + + PA + C + + Y L +P G L N LN G
Sbjct: 2246 RKVSKLAVSAQSEPARVQCRQVFL---KYI---LDYPLGDKLRPNLEFMLAQLNYEHETG 2299
Query: 257 ---TSPLLWYFYSALPRGL---GCSLLFIPLGLVDRRTHAPTVLALGFMALYSLLPHKEL 310
T ++ Y + P+GL C + FIPL L+ + T + M + SLL L
Sbjct: 2300 RESTLEMIAYLFDTFPQGLLHENCGMFFIPLCLMTINDDSATCKKMASMTIKSLLGKISL 2359
Query: 311 RFIIYAFPML 320
+ F M+
Sbjct: 2360 EKKDWLFDMV 2369
>gi|5902084 silver homolog [Homo sapiens]
Length = 661
Score = 29.6 bits (65), Expect = 6.5
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 234 QLTWPEGKVLWYN-TVLNKSSNWGTSPL 260
Q P+G+V+W N T++N S WG P+
Sbjct: 94 QKVLPDGQVIWVNNTIINGSQVWGGQPV 121
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.141 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,425,703
Number of Sequences: 37866
Number of extensions: 774095
Number of successful extensions: 1819
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1804
Number of HSP's gapped (non-prelim): 9
length of query: 488
length of database: 18,247,518
effective HSP length: 106
effective length of query: 382
effective length of database: 14,233,722
effective search space: 5437281804
effective search space used: 5437281804
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.