Guide to the Human Genome
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Name: ADAM10 Sequence: fasta or formatted (748aa) NCBI GI: 4557251
Description:

ADAM metallopeptidase domain 10

Referenced in:

Ephrins and Ephrin Receptors
Metalloproteases
Notch Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         37           2
 C cysteine            4.8         36           2
 D aspartate           5.7         43           2
 E glutamate           5.9         44           2
 F phenylalanine       4.4         33           2
 G glycine             8.2         61           2
 H histidine           3.9         29           1
 I isoleucine          5.3         40           2
 K lysine              6.6         49           3
 L leucine             6.1         46           3
 M methionine          2.1         16           1
 N asparagine          4.7         35           3
 P proline             5.3         40           3
 Q glutamine           4.5         34           2
 R arginine            5.7         43           3
 S serine              7.5         56           2
 T threonine           5.1         38           2
 V valine              4.5         34           1
 W tryptophan          0.8          6           2
 Y tyrosine            3.7         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAM metallopeptidase domain 10 
ADAM17                0.147   a disintegrin and metalloprotease domain 17 prepropr...
ADAM9                 0.062   ADAM metallopeptidase domain 9 isoform 1 precursor [H...
ADAM28                0.059   ADAM metallopeptidase domain 28 isoform 3 preproprot...
ADAM28                0.059   ADAM metallopeptidase domain 28 isoform 1 preproprot...
ADAM8                 0.059   ADAM metallopeptidase domain 8 precursor 
ADAM33                0.055   ADAM metallopeptidase domain 33 isoform alpha prepro...
ADAM33                0.055   ADAM metallopeptidase domain 33 isoform beta preprop...
ADAM15                0.053   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.053   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.053   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.053   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.053   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.053   a disintegrin and metalloproteinase domain 15 isofor...
ADAM22                0.048   ADAM metallopeptidase domain 22 isoform 1 preproprot...
ADAM22                0.048   ADAM metallopeptidase domain 22 isoform 2 preproprot...
ADAM22                0.048   ADAM metallopeptidase domain 22 isoform 5 preproprot...
ADAM22                0.048   ADAM metallopeptidase domain 22 isoform 3 preproprot...
ADAM22                0.048   ADAM metallopeptidase domain 22 isoform 4 preproprote...
ADAM19                0.048   ADAM metallopeptidase domain 19 preproprotein 
ADAM18                0.047   a disintegrin and metalloprotease domain 18 prepropro...
ADAM12                0.046   ADAM metallopeptidase domain 12 isoform 2 preproprot...
ADAM12                0.046   ADAM metallopeptidase domain 12 isoform 1 preproprot...
ADAM23                0.044   ADAM metallopeptidase domain 23 preproprotein 
ADAM7                 0.042   a disintegrin and metalloproteinase domain 7 
ADAM2                 0.039   ADAM metallopeptidase domain 2 proprotein 
ADAM11                0.038   ADAM metallopeptidase domain 11 preproprotein 
ADAM30                0.036   ADAM metallopeptidase domain 30 preproprotein 
ADAM20                0.033   ADAM metallopeptidase domain 20 preproprotein 
ADAM29                0.031   ADAM metallopeptidase domain 29 preproprotein [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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