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Search of human proteins with 45439346
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45439346 peptidylprolyl isomerase (cyclophilin)-like 5
isoform 3 [Homo sapiens]
(146 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45439346 peptidylprolyl isomerase (cyclophilin)-like 5 isofor... 306 5e-84
gi|45439342 peptidylprolyl isomerase (cyclophilin)-like 5 isofor... 189 7e-49
gi|49574502 cytochrome b5 reductase 1 [Homo sapiens] 30 0.56
gi|108860697 zinc finger protein 592 [Homo sapiens] 30 0.73
gi|223468695 zinc finger protein 572 [Homo sapiens] 30 0.95
gi|115430252 serine threonine kinase 39 (STE20/SPS1 homolog, yea... 30 0.95
gi|189571664 DEP domain containing 6 [Homo sapiens] 28 2.1
gi|226371636 MYST histone acetyltransferase 1 isoform 1 [Homo sa... 28 2.1
gi|110815807 zinc finger protein 169 [Homo sapiens] 28 2.1
gi|24308225 zinc finger 398 isoform b [Homo sapiens] 28 2.8
gi|25777704 zinc finger 398 isoform a [Homo sapiens] 28 2.8
gi|194578923 sperm associated antigen 9 isoform 1 [Homo sapiens] 28 3.6
gi|27436920 sperm associated antigen 9 isoform 3 [Homo sapiens] 28 3.6
gi|59710107 zinc finger protein 350 [Homo sapiens] 27 6.2
gi|226371638 MYST histone acetyltransferase 1 isoform 2 [Homo sa... 27 6.2
gi|239752832 PREDICTED: similar to SET translocation [Homo sapiens] 27 8.0
gi|239747380 PREDICTED: similar to SET translocation [Homo sapiens] 27 8.0
gi|239741205 PREDICTED: similar to SET translocation [Homo sapiens] 27 8.0
gi|122937211 KIAA0368 protein [Homo sapiens] 27 8.0
>gi|45439346 peptidylprolyl isomerase (cyclophilin)-like 5 isoform 3
[Homo sapiens]
Length = 146
Score = 306 bits (783), Expect = 5e-84
Identities = 146/146 (100%), Positives = 146/146 (100%)
Query: 1 MKLHCEVEVISRHLPALGLRNRGKGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRY 60
MKLHCEVEVISRHLPALGLRNRGKGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRY
Sbjct: 1 MKLHCEVEVISRHLPALGLRNRGKGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRY 60
Query: 61 ELRENIEQFFTKFVDEGKATVRLKEPPVDICLSKDSIWLSYHSIPSLPRFGYRKNLCLWK 120
ELRENIEQFFTKFVDEGKATVRLKEPPVDICLSKDSIWLSYHSIPSLPRFGYRKNLCLWK
Sbjct: 61 ELRENIEQFFTKFVDEGKATVRLKEPPVDICLSKDSIWLSYHSIPSLPRFGYRKNLCLWK 120
Query: 121 ILSELFHSRNYYHESAFCCPHCGLSR 146
ILSELFHSRNYYHESAFCCPHCGLSR
Sbjct: 121 ILSELFHSRNYYHESAFCCPHCGLSR 146
>gi|45439342 peptidylprolyl isomerase (cyclophilin)-like 5 isoform
1 [Homo sapiens]
Length = 414
Score = 189 bits (480), Expect = 7e-49
Identities = 94/94 (100%), Positives = 94/94 (100%)
Query: 1 MKLHCEVEVISRHLPALGLRNRGKGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRY 60
MKLHCEVEVISRHLPALGLRNRGKGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRY
Sbjct: 1 MKLHCEVEVISRHLPALGLRNRGKGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRY 60
Query: 61 ELRENIEQFFTKFVDEGKATVRLKEPPVDICLSK 94
ELRENIEQFFTKFVDEGKATVRLKEPPVDICLSK
Sbjct: 61 ELRENIEQFFTKFVDEGKATVRLKEPPVDICLSK 94
>gi|49574502 cytochrome b5 reductase 1 [Homo sapiens]
Length = 305
Score = 30.4 bits (67), Expect = 0.56
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 17 LGLRNRGKGVRAVLSLCQQTSR-SQPPVRAFLLISTLKDKRGTRYELRENIEQFFTKFVD 75
LG+ G G+ +L L + + + P + FLL + +K LRE++E+ ++ +
Sbjct: 179 LGMIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKD---IILREDLEELQARYPN 235
Query: 76 EGKATVRLKEPPVDICLSK 94
K L PP D SK
Sbjct: 236 RFKLWFTLDHPPKDWAYSK 254
>gi|108860697 zinc finger protein 592 [Homo sapiens]
Length = 1267
Score = 30.0 bits (66), Expect = 0.73
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 127 HSRNYYHESAFCCPHCGL 144
H R + H+S +CCP CG+
Sbjct: 758 HQRIHAHKSPYCCPECGV 775
>gi|223468695 zinc finger protein 572 [Homo sapiens]
Length = 529
Score = 29.6 bits (65), Expect = 0.95
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
Query: 81 VRLKEPPVDICLSKDSIWLSYHSI----PSLPRFGYRKNLCLWKILSE----LFHSRNYY 132
++L E P C S LS H I YR + C WK S+ + H R +
Sbjct: 377 IQLGEKPYRCCECGKSFGLSSHLIRHQRTHTGEKPYRCSEC-WKTFSQSSTLVIHQRTHT 435
Query: 133 HESAFCCPHCGLS 145
E + CP CG S
Sbjct: 436 GEKPYKCPDCGES 448
>gi|115430252 serine threonine kinase 39 (STE20/SPS1 homolog, yeast)
[Homo sapiens]
Length = 545
Score = 29.6 bits (65), Expect = 0.95
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 19 LRNRGKGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRYELRENIEQFFTKFVDEGK 78
++ GK R +LSLC Q S+ P A LL K R L IE+ T+ D +
Sbjct: 303 MKKYGKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQKAKNREYL---IEKLLTRTPDIAQ 359
Query: 79 ATVRLKEPP 87
+++ P
Sbjct: 360 RAKKVRRVP 368
>gi|189571664 DEP domain containing 6 [Homo sapiens]
Length = 409
Score = 28.5 bits (62), Expect = 2.1
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 12/96 (12%)
Query: 53 KDKRGTRYELRENIEQFFTKFVDEGKATVRLKEPPVDICLSKDSIWLSYHSIPSLP---- 108
+++ G +YE +F V EG+AT R + +C + H P
Sbjct: 154 REEEGVKYERTFMASEFLDWLVQEGEATTR--KEAEQLCHRLMEHGIIQHVSNKHPFVDS 211
Query: 109 ------RFGYRKNLCLWKILSELFHSRNYYHESAFC 138
R +R+ L ++L+E S H+S FC
Sbjct: 212 NLLYQFRMNFRRRRRLMELLNEKSPSSQETHDSPFC 247
>gi|226371636 MYST histone acetyltransferase 1 isoform 1 [Homo
sapiens]
Length = 458
Score = 28.5 bits (62), Expect = 2.1
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 24 KGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRYELRENIEQFFTKFVDEGKATVRL 83
+G ++ L Q TS +Q + ISTL+ +Y +++ K V+E + +
Sbjct: 377 RGTLSIKDLSQMTSITQNDI-----ISTLQSLNMVKYWKGQHVICVTPKLVEEHLKSAQY 431
Query: 84 KEPPVDICLSKDSIWLSY 101
K+PP+ + DS+ L +
Sbjct: 432 KKPPITV----DSVCLKW 445
>gi|110815807 zinc finger protein 169 [Homo sapiens]
Length = 603
Score = 28.5 bits (62), Expect = 2.1
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 6/33 (18%)
Query: 111 GYRKNLCLWKILSELFHSRNYYHESAFCCPHCG 143
G+R+ + L L H R + E F CP CG
Sbjct: 326 GFRQKIAL------LLHQRTHLEEKPFVCPECG 352
>gi|24308225 zinc finger 398 isoform b [Homo sapiens]
Length = 471
Score = 28.1 bits (61), Expect = 2.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 122 LSELFHSRNYYHESAFCCPHCGL 144
+S L H R + E F CP CG+
Sbjct: 297 ISLLLHQRGHAQERPFSCPQCGI 319
Score = 26.6 bits (57), Expect = 8.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 125 LFHSRNYYHESAFCCPHCGLS 145
L H R + E F CPHCG S
Sbjct: 356 LNHRRLHTGERPFSCPHCGKS 376
>gi|25777704 zinc finger 398 isoform a [Homo sapiens]
Length = 642
Score = 28.1 bits (61), Expect = 2.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 122 LSELFHSRNYYHESAFCCPHCGL 144
+S L H R + E F CP CG+
Sbjct: 468 ISLLLHQRGHAQERPFSCPQCGI 490
Score = 26.6 bits (57), Expect = 8.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 125 LFHSRNYYHESAFCCPHCGLS 145
L H R + E F CPHCG S
Sbjct: 527 LNHRRLHTGERPFSCPHCGKS 547
>gi|194578923 sperm associated antigen 9 isoform 1 [Homo sapiens]
Length = 1321
Score = 27.7 bits (60), Expect = 3.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 40 QPPVRAFLLISTLKDKRGTRYELRENIEQFFTKFVDEGKATVRLKEPPVDI 90
Q VR +I ++ + + R +I QFF++ T + EPPV++
Sbjct: 526 QEAVRWTEMIRASRENPAMQEKKRSSIWQFFSRLFSSSSNTTKKPEPPVNL 576
>gi|27436920 sperm associated antigen 9 isoform 3 [Homo sapiens]
Length = 1307
Score = 27.7 bits (60), Expect = 3.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 40 QPPVRAFLLISTLKDKRGTRYELRENIEQFFTKFVDEGKATVRLKEPPVDI 90
Q VR +I ++ + + R +I QFF++ T + EPPV++
Sbjct: 512 QEAVRWTEMIRASRENPAMQEKKRSSIWQFFSRLFSSSSNTTKKPEPPVNL 562
>gi|59710107 zinc finger protein 350 [Homo sapiens]
Length = 532
Score = 26.9 bits (58), Expect = 6.2
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Query: 98 WLSYHSIPSLPRFGYRKNLCLWKILSELF----HSRNYYHESAFCCPHCG 143
WL+ H + +R +LC K S F H R + E + CP CG
Sbjct: 220 WLTDHQVMHTGEKPHRCSLCE-KAFSRKFMLTEHQRTHTGEKPYECPECG 268
>gi|226371638 MYST histone acetyltransferase 1 isoform 2 [Homo
sapiens]
Length = 467
Score = 26.9 bits (58), Expect = 6.2
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 24 KGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRYELRENIEQFFTKFVDEGKATVRL 83
+G ++ L Q TS +Q + ISTL+ +Y +++ K V+E + +
Sbjct: 377 RGTLSIKDLSQMTSITQNDI-----ISTLQSLNMVKYWKGQHVICVTPKLVEEHLKSAQY 431
Query: 84 KEPPV 88
K+PP+
Sbjct: 432 KKPPI 436
>gi|239752832 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 26.6 bits (57), Expect = 8.0
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 8/61 (13%)
Query: 50 STLKDKRGTRYELRENIEQFFTKFVDEGKATVRLKEPPVDICLSKDSIW---LSYHSIPS 106
S+ + +R E E FFT F D A E + KD IW L Y+ +P
Sbjct: 193 SSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELEEVI-----KDDIWPNPLQYYLVPD 247
Query: 107 L 107
+
Sbjct: 248 M 248
>gi|239747380 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 26.6 bits (57), Expect = 8.0
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 8/61 (13%)
Query: 50 STLKDKRGTRYELRENIEQFFTKFVDEGKATVRLKEPPVDICLSKDSIW---LSYHSIPS 106
S+ + +R E E FFT F D A E + KD IW L Y+ +P
Sbjct: 193 SSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELEEVI-----KDDIWPNPLQYYLVPD 247
Query: 107 L 107
+
Sbjct: 248 M 248
>gi|239741205 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 26.6 bits (57), Expect = 8.0
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 8/61 (13%)
Query: 50 STLKDKRGTRYELRENIEQFFTKFVDEGKATVRLKEPPVDICLSKDSIW---LSYHSIPS 106
S+ + +R E E FFT F D A E + KD IW L Y+ +P
Sbjct: 193 SSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELEEVI-----KDDIWPNPLQYYLVPD 247
Query: 107 L 107
+
Sbjct: 248 M 248
>gi|122937211 KIAA0368 protein [Homo sapiens]
Length = 2017
Score = 26.6 bits (57), Expect = 8.0
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 7 VEVISRHLPALGLRNRGKGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRYELRENI 66
+ + + L + + + +G A+ S+ +QTS PP +L + L+ G + +E +
Sbjct: 1701 ITITQKALQSQSWKMKAQGAIAMASIAKQTSSLVPPYLGMILTALLQGLAGRTWAGKEEL 1760
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.139 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,101,710
Number of Sequences: 37866
Number of extensions: 249224
Number of successful extensions: 1556
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1533
Number of HSP's gapped (non-prelim): 33
length of query: 146
length of database: 18,247,518
effective HSP length: 92
effective length of query: 54
effective length of database: 14,763,846
effective search space: 797247684
effective search space used: 797247684
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.