Guide to the Human Genome
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Name: SRP9 Sequence: fasta or formatted (86aa) NCBI GI: 4507217
Description:

signal recognition particle 9kDa isoform 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [82aa] signal recognition particle 9kDa isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1          7           2
 C cysteine            2.3          2           1
 D aspartate           7.0          6           2
 E glutamate           8.1          7           2
 F phenylalanine       2.3          2           1
 G glycine             1.2          1           1
 H histidine           2.3          2           1
 I isoleucine          1.2          1           1
 K lysine             10.5          9           2
 L leucine             9.3          8           1
 M methionine          5.8          5           1
 N asparagine          2.3          2           1
 P proline             2.3          2           1
 Q glutamine           5.8          5           1
 R arginine            5.8          5           1
 S serine              3.5          3           1
 T threonine           5.8          5           1
 V valine             10.5          9           2
 W tryptophan          1.2          1           1
 Y tyrosine            4.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal recognition particle 9kDa isoform 2 
SRP9L1                1.000   PREDICTED: signal recognition particle 9-like 1 [Ho...
SRP9                  0.497   signal recognition particle 9kDa isoform 1 
ASXL3                 0.013   additional sex combs like 3 
HSP90AB1              0.007   heat shock 90kDa protein 1, beta 
C8orf84               0.007   RPE-spondin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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