Guide to the Human Genome
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Name: RPL8 Sequence: fasta or formatted (257aa) NCBI GI: 4506663
Description:

ribosomal protein L8

Referenced in:

Ribosomes

Other entries for this name:
alt mRNA [257aa] ribosomal protein L8
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         25           2
 C cysteine            1.6          4           2
 D aspartate           2.7          7           1
 E glutamate           3.9         10           2
 F phenylalanine       2.7          7           1
 G glycine            12.8         33           3
 H histidine           3.9         10           1
 I isoleucine          6.2         16           2
 K lysine             10.1         26           2
 L leucine             4.3         11           1
 M methionine          1.2          3           1
 N asparagine          3.5          9           1
 P proline             5.4         14           1
 Q glutamine           1.9          5           1
 R arginine           10.9         28           2
 S serine              3.1          8           2
 T threonine           4.3         11           1
 V valine              8.9         23           2
 W tryptophan          0.4          1           1
 Y tyrosine            2.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein L8 
RPL8                  1.000   ribosomal protein L8 
MRPL2                 0.040   mitochondrial ribosomal protein L2 
HMCN2                 0.008   PREDICTED: hemicentin 2 
HMCN2                 0.008   PREDICTED: hemicentin 2 
HMCN2                 0.008   PREDICTED: hemicentin 2 
PLCL2                 0.008   phospholipase C-like 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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