Search of human proteins with 4505145

Search of human proteins with 4505145

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4505145 malic enzyme 2, NAD(+)-dependent, mitochondrial
[Homo sapiens]
         (584 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4505145 malic enzyme 2, NAD(+)-dependent, mitochondrial [Homo...  1174   0.0  
gi|239049447 mitochondrial malic enzyme 3 [Homo sapiens]              657   0.0  
gi|62420882 mitochondrial malic enzyme 3 [Homo sapiens]               657   0.0  
gi|62420880 mitochondrial malic enzyme 3 [Homo sapiens]               657   0.0  
gi|4505143 cytosolic malic enzyme 1 [Homo sapiens]                    654   0.0  
gi|46195719 olfactomedin-like 2B [Homo sapiens]                        30   8.0  

>gi|4505145 malic enzyme 2, NAD(+)-dependent, mitochondrial [Homo
           sapiens]
          Length = 584

 Score = 1174 bits (3037), Expect = 0.0
 Identities = 584/584 (100%), Positives = 584/584 (100%)

Query: 1   MLSRLRVVSTTCTLACRHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIET 60
           MLSRLRVVSTTCTLACRHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIET
Sbjct: 1   MLSRLRVVSTTCTLACRHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIET 60

Query: 61  QDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLAC 120
           QDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLAC
Sbjct: 61  QDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLAC 120

Query: 121 SQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIP 180
           SQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIP
Sbjct: 121 SQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIP 180

Query: 181 VGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMK 240
           VGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMK
Sbjct: 181 VGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMK 240

Query: 241 AITDRYGRNTLIQFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISK 300
           AITDRYGRNTLIQFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISK
Sbjct: 241 AITDRYGRNTLIQFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISK 300

Query: 301 PISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDS 360
           PISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDS
Sbjct: 301 PISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDS 360

Query: 361 YQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALS 420
           YQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALS
Sbjct: 361 YQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALS 420

Query: 421 NPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVIL 480
           NPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVIL
Sbjct: 421 NPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVIL 480

Query: 481 CNTRHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMA 540
           CNTRHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMA
Sbjct: 481 CNTRHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMA 540

Query: 541 FRYPEPEDKAKYVKERTWRSEYDSLLPDVYEWPESASSPPVITE 584
           FRYPEPEDKAKYVKERTWRSEYDSLLPDVYEWPESASSPPVITE
Sbjct: 541 FRYPEPEDKAKYVKERTWRSEYDSLLPDVYEWPESASSPPVITE 584


>gi|239049447 mitochondrial malic enzyme 3 [Homo sapiens]
          Length = 604

 Score =  657 bits (1694), Expect = 0.0
 Identities = 314/560 (56%), Positives = 417/560 (74%), Gaps = 3/560 (0%)

Query: 17  RHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT 76
           R + +K++G  +  NP  NKGMAFTL+ER  LG+ GL+PP   +QD+Q LR  R  ++  
Sbjct: 42  RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 101

Query: 77  SPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 136
           S L+KYI +M +Q+RNEKLFYR+L  D+E  MPIVYTPTVGLAC  YG  FRRP+GLFI+
Sbjct: 102 SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 161

Query: 137 ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPD 196
           I D+GH+ +++++WPE+++KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P 
Sbjct: 162 IHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQ 221

Query: 197 RCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFED 256
           +CLPV +DVGT+N  LL+DP Y+GL  +R   + YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 222 QCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFED 281

Query: 257 FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAA 316
           F N NAFR L KYR KYC FNDDIQGTA+VA+AG+LAA ++    +S H  +F GAGEAA
Sbjct: 282 FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 341

Query: 317 LGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDT 376
           +GIA+L+VM++ + G+ + EA +KIWM D  GL+VKGR + ++  +E F    PE   ++
Sbjct: 342 MGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGR-SHLNHEKEMFAQDHPE--VNS 398

Query: 377 FEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTL 436
            E+ V ++KP+ IIGVA     FT  ++R MAS +ERP+IFALSNPT++AECTAE+ Y +
Sbjct: 399 LEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 458

Query: 437 TEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAK 496
           TEGR +FASGSPF  V L DG+ F PGQGNN Y+FPGVAL VI    RHI D +FL  A+
Sbjct: 459 TEGRGIFASGSPFKSVTLEDGKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 518

Query: 497 ALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKER 556
            +  +++++ L+QGRLYPPL+ I++VS+ IAIKV +Y Y + +A  YPEP+DK  +V+  
Sbjct: 519 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSL 578

Query: 557 TWRSEYDSLLPDVYEWPESA 576
            +  +YDS   D Y WP+ A
Sbjct: 579 VYTPDYDSFTLDSYTWPKEA 598


>gi|62420882 mitochondrial malic enzyme 3 [Homo sapiens]
          Length = 604

 Score =  657 bits (1694), Expect = 0.0
 Identities = 314/560 (56%), Positives = 417/560 (74%), Gaps = 3/560 (0%)

Query: 17  RHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT 76
           R + +K++G  +  NP  NKGMAFTL+ER  LG+ GL+PP   +QD+Q LR  R  ++  
Sbjct: 42  RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 101

Query: 77  SPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 136
           S L+KYI +M +Q+RNEKLFYR+L  D+E  MPIVYTPTVGLAC  YG  FRRP+GLFI+
Sbjct: 102 SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 161

Query: 137 ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPD 196
           I D+GH+ +++++WPE+++KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P 
Sbjct: 162 IHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQ 221

Query: 197 RCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFED 256
           +CLPV +DVGT+N  LL+DP Y+GL  +R   + YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 222 QCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFED 281

Query: 257 FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAA 316
           F N NAFR L KYR KYC FNDDIQGTA+VA+AG+LAA ++    +S H  +F GAGEAA
Sbjct: 282 FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 341

Query: 317 LGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDT 376
           +GIA+L+VM++ + G+ + EA +KIWM D  GL+VKGR + ++  +E F    PE   ++
Sbjct: 342 MGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGR-SHLNHEKEMFAQDHPE--VNS 398

Query: 377 FEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTL 436
            E+ V ++KP+ IIGVA     FT  ++R MAS +ERP+IFALSNPT++AECTAE+ Y +
Sbjct: 399 LEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 458

Query: 437 TEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAK 496
           TEGR +FASGSPF  V L DG+ F PGQGNN Y+FPGVAL VI    RHI D +FL  A+
Sbjct: 459 TEGRGIFASGSPFKSVTLEDGKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 518

Query: 497 ALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKER 556
            +  +++++ L+QGRLYPPL+ I++VS+ IAIKV +Y Y + +A  YPEP+DK  +V+  
Sbjct: 519 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSL 578

Query: 557 TWRSEYDSLLPDVYEWPESA 576
            +  +YDS   D Y WP+ A
Sbjct: 579 VYTPDYDSFTLDSYTWPKEA 598


>gi|62420880 mitochondrial malic enzyme 3 [Homo sapiens]
          Length = 604

 Score =  657 bits (1694), Expect = 0.0
 Identities = 314/560 (56%), Positives = 417/560 (74%), Gaps = 3/560 (0%)

Query: 17  RHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT 76
           R + +K++G  +  NP  NKGMAFTL+ER  LG+ GL+PP   +QD+Q LR  R  ++  
Sbjct: 42  RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 101

Query: 77  SPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 136
           S L+KYI +M +Q+RNEKLFYR+L  D+E  MPIVYTPTVGLAC  YG  FRRP+GLFI+
Sbjct: 102 SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 161

Query: 137 ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPD 196
           I D+GH+ +++++WPE+++KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P 
Sbjct: 162 IHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQ 221

Query: 197 RCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFED 256
           +CLPV +DVGT+N  LL+DP Y+GL  +R   + YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 222 QCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFED 281

Query: 257 FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAA 316
           F N NAFR L KYR KYC FNDDIQGTA+VA+AG+LAA ++    +S H  +F GAGEAA
Sbjct: 282 FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 341

Query: 317 LGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDT 376
           +GIA+L+VM++ + G+ + EA +KIWM D  GL+VKGR + ++  +E F    PE   ++
Sbjct: 342 MGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGR-SHLNHEKEMFAQDHPE--VNS 398

Query: 377 FEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTL 436
            E+ V ++KP+ IIGVA     FT  ++R MAS +ERP+IFALSNPT++AECTAE+ Y +
Sbjct: 399 LEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 458

Query: 437 TEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAK 496
           TEGR +FASGSPF  V L DG+ F PGQGNN Y+FPGVAL VI    RHI D +FL  A+
Sbjct: 459 TEGRGIFASGSPFKSVTLEDGKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 518

Query: 497 ALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKER 556
            +  +++++ L+QGRLYPPL+ I++VS+ IAIKV +Y Y + +A  YPEP+DK  +V+  
Sbjct: 519 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSL 578

Query: 557 TWRSEYDSLLPDVYEWPESA 576
            +  +YDS   D Y WP+ A
Sbjct: 579 VYTPDYDSFTLDSYTWPKEA 598


>gi|4505143 cytosolic malic enzyme 1 [Homo sapiens]
          Length = 572

 Score =  654 bits (1686), Expect = 0.0
 Identities = 311/560 (55%), Positives = 411/560 (73%), Gaps = 3/560 (0%)

Query: 15  ACRHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKK 74
           A R  H  ++G  L  NP  NK +AFTL+ERQ L + GLLPP   +Q+IQ LR  +N + 
Sbjct: 5   APRRRHTHQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEH 64

Query: 75  MTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLF 134
           + S  ++Y+ +M +Q+RNEKLFYR+L  DIE  MPIVYTPTVGLAC QY  +FR+P+GLF
Sbjct: 65  LNSDFDRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLF 124

Query: 135 ISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIR 194
           I+I DRGH+ S+++ WPE+ +KA+VVTDGERILGLGDLG  GMGIPVGKL LYTAC G+ 
Sbjct: 125 ITIHDRGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMN 184

Query: 195 PDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQF 254
           P  CLPV +DVGT+N  LLKDP Y+GL Q+R R  +YDD +DEFM+A++ +YG N LIQF
Sbjct: 185 PQECLPVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQF 244

Query: 255 EDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGE 314
           EDF N NAFR L KYR +YCTFNDDIQGTA+VA+AGLLAA ++    +S+  ILF GAGE
Sbjct: 245 EDFANVNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGE 304

Query: 315 AALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIP 374
           AALGIA+LIVM++ + GL +++A KKIW+ D  GL+VKGR A +   +E F H   E   
Sbjct: 305 AALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGR-ASLTQEKEKFAHEHEEM-- 361

Query: 375 DTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAY 434
              E  V  +KP+ +IGVA  G  F+  +++ MA+ NERP+IFALSNPT++AEC+AE+ Y
Sbjct: 362 KNLEAIVQEIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCY 421

Query: 435 TLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEA 494
            +T+GR +FASGSPF PV L +G+   PGQGNN Y+FPGVAL V+ C  R I+D++FL  
Sbjct: 422 KITKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTT 481

Query: 495 AKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVK 554
           A+ +  Q++D+ L +GRLYPPL  I++VS+ IA K+ +  Y  K A  YPEP++K  +V+
Sbjct: 482 AEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVR 541

Query: 555 ERTWRSEYDSLLPDVYEWPE 574
            + + ++YD +LPD Y WPE
Sbjct: 542 SQMYSTDYDQILPDCYSWPE 561


>gi|46195719 olfactomedin-like 2B [Homo sapiens]
          Length = 750

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 5/100 (5%)

Query: 208 DNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLR 267
           D ++ +  P     Y + +     D L  +    +T+ Y  NTL++F +  N    R+  
Sbjct: 496 DTLSTITGPTTQNTYGRNEGAWMKDPLAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSN 555

Query: 268 KYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKI 307
            Y+  Y        GT  V   G     +  ++ I ++ +
Sbjct: 556 SYKLPYSWI-----GTGHVVYNGAFYYNRAFTRNIIKYDL 590


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,004,962
Number of Sequences: 37866
Number of extensions: 985045
Number of successful extensions: 1892
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1882
Number of HSP's gapped (non-prelim): 6
length of query: 584
length of database: 18,247,518
effective HSP length: 108
effective length of query: 476
effective length of database: 14,157,990
effective search space: 6739203240
effective search space used: 6739203240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.