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Search of human proteins with 4504437
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4504437 heme oxygenase (decyclizing) 1 [Homo sapiens]
(288 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4504437 heme oxygenase (decyclizing) 1 [Homo sapiens] 572 e-163
gi|187761311 heme oxygenase (decyclizing) 2 [Homo sapiens] 255 3e-68
gi|187761309 heme oxygenase (decyclizing) 2 [Homo sapiens] 255 3e-68
gi|187761307 heme oxygenase (decyclizing) 2 [Homo sapiens] 255 3e-68
gi|8051608 heme oxygenase (decyclizing) 2 [Homo sapiens] 255 3e-68
gi|239582763 ral guanine nucleotide dissociation stimulator-like... 30 3.2
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 29 4.2
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 29 4.2
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 29 4.2
gi|239748061 PREDICTED: hypothetical protein XP_002346523 [Homo ... 29 5.5
gi|239741954 PREDICTED: hypothetical protein XP_002342361 [Homo ... 29 5.5
gi|33946327 nucleoporin 214kDa [Homo sapiens] 28 7.2
>gi|4504437 heme oxygenase (decyclizing) 1 [Homo sapiens]
Length = 288
Score = 572 bits (1475), Expect = e-163
Identities = 288/288 (100%), Positives = 288/288 (100%)
Query: 1 MERPQPDSMPQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVA 60
MERPQPDSMPQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVA
Sbjct: 1 MERPQPDSMPQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVA 60
Query: 61 LEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHE 120
LEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHE
Sbjct: 61 LEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHE 120
Query: 121 VGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQ 180
VGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQ
Sbjct: 121 VGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQ 180
Query: 181 LYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQELLTHDTKDQSPSRAPGLRQRA 240
LYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQELLTHDTKDQSPSRAPGLRQRA
Sbjct: 181 LYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQELLTHDTKDQSPSRAPGLRQRA 240
Query: 241 SNKVQDSAPVETPRGKPPLNTRSQAPLLRWVLTLSFLVATVAVGLYAM 288
SNKVQDSAPVETPRGKPPLNTRSQAPLLRWVLTLSFLVATVAVGLYAM
Sbjct: 241 SNKVQDSAPVETPRGKPPLNTRSQAPLLRWVLTLSFLVATVAVGLYAM 288
>gi|187761311 heme oxygenase (decyclizing) 2 [Homo sapiens]
Length = 316
Score = 255 bits (652), Expect = 3e-68
Identities = 117/208 (56%), Positives = 160/208 (76%)
Query: 12 DLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKES 71
DLSE LKE TKE H +AEN +F+++F KG + ++ FKL +LY Y ALEEE+ERNK+
Sbjct: 32 DLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMERNKDH 91
Query: 72 PVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVA 131
P FAP+YFP ELHRK AL +D+ +++G W+E + A Q+YV+R+H +G+ EPELLVA
Sbjct: 92 PAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKAAQKYVERIHYIGQNEPELLVA 151
Query: 132 HAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEM 191
HAYTRY+GDLSGGQVLKK+AQ+AL LPS+GEG F+ F N+ +A +FKQLYR+RMN+L++
Sbjct: 152 HAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALDL 211
Query: 192 TPAVRQRVIEEAKTAFLLNIQLFEELQE 219
++R++EEA AF N+Q+F EL +
Sbjct: 212 NMKTKERIVEEANKAFEYNMQIFNELDQ 239
>gi|187761309 heme oxygenase (decyclizing) 2 [Homo sapiens]
Length = 316
Score = 255 bits (652), Expect = 3e-68
Identities = 117/208 (56%), Positives = 160/208 (76%)
Query: 12 DLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKES 71
DLSE LKE TKE H +AEN +F+++F KG + ++ FKL +LY Y ALEEE+ERNK+
Sbjct: 32 DLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMERNKDH 91
Query: 72 PVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVA 131
P FAP+YFP ELHRK AL +D+ +++G W+E + A Q+YV+R+H +G+ EPELLVA
Sbjct: 92 PAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKAAQKYVERIHYIGQNEPELLVA 151
Query: 132 HAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEM 191
HAYTRY+GDLSGGQVLKK+AQ+AL LPS+GEG F+ F N+ +A +FKQLYR+RMN+L++
Sbjct: 152 HAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALDL 211
Query: 192 TPAVRQRVIEEAKTAFLLNIQLFEELQE 219
++R++EEA AF N+Q+F EL +
Sbjct: 212 NMKTKERIVEEANKAFEYNMQIFNELDQ 239
>gi|187761307 heme oxygenase (decyclizing) 2 [Homo sapiens]
Length = 316
Score = 255 bits (652), Expect = 3e-68
Identities = 117/208 (56%), Positives = 160/208 (76%)
Query: 12 DLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKES 71
DLSE LKE TKE H +AEN +F+++F KG + ++ FKL +LY Y ALEEE+ERNK+
Sbjct: 32 DLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMERNKDH 91
Query: 72 PVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVA 131
P FAP+YFP ELHRK AL +D+ +++G W+E + A Q+YV+R+H +G+ EPELLVA
Sbjct: 92 PAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKAAQKYVERIHYIGQNEPELLVA 151
Query: 132 HAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEM 191
HAYTRY+GDLSGGQVLKK+AQ+AL LPS+GEG F+ F N+ +A +FKQLYR+RMN+L++
Sbjct: 152 HAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALDL 211
Query: 192 TPAVRQRVIEEAKTAFLLNIQLFEELQE 219
++R++EEA AF N+Q+F EL +
Sbjct: 212 NMKTKERIVEEANKAFEYNMQIFNELDQ 239
>gi|8051608 heme oxygenase (decyclizing) 2 [Homo sapiens]
Length = 316
Score = 255 bits (652), Expect = 3e-68
Identities = 117/208 (56%), Positives = 160/208 (76%)
Query: 12 DLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKES 71
DLSE LKE TKE H +AEN +F+++F KG + ++ FKL +LY Y ALEEE+ERNK+
Sbjct: 32 DLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMERNKDH 91
Query: 72 PVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVA 131
P FAP+YFP ELHRK AL +D+ +++G W+E + A Q+YV+R+H +G+ EPELLVA
Sbjct: 92 PAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKAAQKYVERIHYIGQNEPELLVA 151
Query: 132 HAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEM 191
HAYTRY+GDLSGGQVLKK+AQ+AL LPS+GEG F+ F N+ +A +FKQLYR+RMN+L++
Sbjct: 152 HAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALDL 211
Query: 192 TPAVRQRVIEEAKTAFLLNIQLFEELQE 219
++R++EEA AF N+Q+F EL +
Sbjct: 212 NMKTKERIVEEANKAFEYNMQIFNELDQ 239
>gi|239582763 ral guanine nucleotide dissociation stimulator-like 3
isoform 2 [Homo sapiens]
Length = 710
Score = 29.6 bits (65), Expect = 3.2
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 211 IQLFEELQELLTHDTKDQSPSRAPGLRQRASNKVQDSAPVETPR------GKPPLNTRSQ 264
I L + L L + K SPS +PG ++ V +P +PR G PP + Q
Sbjct: 519 ISLTKRLSAKLARE-KSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAPAGSPPASPGPQ 577
Query: 265 APLLRWVLTL 274
P + L+L
Sbjct: 578 GPSTKLPLSL 587
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 29.3 bits (64), Expect = 4.2
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 226 KDQSPSRAPGLRQ----RASNKVQDSAPVETPRGKPPLNTRSQAP 266
K Q P PG Q + NK Q P P+G PP +S++P
Sbjct: 46 KPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSP 90
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 29.3 bits (64), Expect = 4.2
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 226 KDQSPSRAPGLRQ----RASNKVQDSAPVETPRGKPPLNTRSQAP 266
K Q P PG Q + NK Q P P+G PP +S++P
Sbjct: 46 KPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSP 90
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 29.3 bits (64), Expect = 4.2
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 226 KDQSPSRAPGLRQ----RASNKVQDSAPVETPRGKPPLNTRSQAP 266
K Q P PG Q + NK Q P P+G PP +S++P
Sbjct: 46 KPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSP 90
>gi|239748061 PREDICTED: hypothetical protein XP_002346523 [Homo
sapiens]
Length = 182
Score = 28.9 bits (63), Expect = 5.5
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 235 GLRQRASNKVQDSAPVETPRGKPPLNTRSQAP 266
GLR K SAP T RG+PPL+ +++ P
Sbjct: 76 GLRHEIRLK-SGSAPASTARGRPPLSPQAETP 106
>gi|239741954 PREDICTED: hypothetical protein XP_002342361 [Homo
sapiens]
Length = 152
Score = 28.9 bits (63), Expect = 5.5
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 235 GLRQRASNKVQDSAPVETPRGKPPLNTRSQAP 266
GLR K SAP T RG+PPL+ +++ P
Sbjct: 46 GLRHEIRLK-SGSAPASTARGRPPLSPQAETP 76
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 28.5 bits (62), Expect = 7.2
Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Query: 173 ASATKFKQLYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQELLTHDTKDQSPSR 232
A + KQ + TP VR + L+ + +E+L E+ + + QS
Sbjct: 937 AKLSPMKQAQLRNFLAKRKTPPVRSTAPASLSRSAFLSQRYYEDLDEVSSTSSVSQSLES 996
Query: 233 APGLRQRASNKVQDSAPVETPRGKPPLNTRSQAPLL 268
R S K D A V+ PR P + T S P L
Sbjct: 997 EDA---RTSCK-DDEAVVQAPRHAPVVRTPSIQPSL 1028
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,062,509
Number of Sequences: 37866
Number of extensions: 499345
Number of successful extensions: 1602
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1590
Number of HSP's gapped (non-prelim): 17
length of query: 288
length of database: 18,247,518
effective HSP length: 101
effective length of query: 187
effective length of database: 14,423,052
effective search space: 2697110724
effective search space used: 2697110724
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.