Search of human proteins with 4503933

Search of human proteins with 4503933

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4503933 L-arginine:glycine amidinotransferase precursor
[Homo sapiens]
         (423 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4503933 L-arginine:glycine amidinotransferase precursor [Homo...   888   0.0  
gi|154689719 hypothetical protein LOC23231 [Homo sapiens]              32   1.1  
gi|98991767 mitogen-activated protein kinase kinase kinase 7 int...    31   2.4  
gi|5729718 trophoblast glycoprotein [Homo sapiens]                     30   3.2  
gi|14670362 POZ (BTB) and AT hook containing zinc finger 1 long ...    29   7.1  

>gi|4503933 L-arginine:glycine amidinotransferase precursor [Homo
           sapiens]
          Length = 423

 Score =  888 bits (2295), Expect = 0.0
 Identities = 423/423 (100%), Positives = 423/423 (100%)

Query: 1   MLRVRCLRGGSRGAEAVHYIGSRLGRTLTGWVQRTFQSTQAATASSRNSCAADDKATEPL 60
           MLRVRCLRGGSRGAEAVHYIGSRLGRTLTGWVQRTFQSTQAATASSRNSCAADDKATEPL
Sbjct: 1   MLRVRCLRGGSRGAEAVHYIGSRLGRTLTGWVQRTFQSTQAATASSRNSCAADDKATEPL 60

Query: 61  PKDCPVSSYNEWDPLEEVIVGRAENACVPPFTIEVKANTYEKYWPFYQKQGGHYFPKDHL 120
           PKDCPVSSYNEWDPLEEVIVGRAENACVPPFTIEVKANTYEKYWPFYQKQGGHYFPKDHL
Sbjct: 61  PKDCPVSSYNEWDPLEEVIVGRAENACVPPFTIEVKANTYEKYWPFYQKQGGHYFPKDHL 120

Query: 121 KKAVAEIEEMCNILKTEGVTVRRPDPIDWSLKYKTPDFESTGLYSAMPRDILIVVGNEII 180
           KKAVAEIEEMCNILKTEGVTVRRPDPIDWSLKYKTPDFESTGLYSAMPRDILIVVGNEII
Sbjct: 121 KKAVAEIEEMCNILKTEGVTVRRPDPIDWSLKYKTPDFESTGLYSAMPRDILIVVGNEII 180

Query: 181 EAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELYNQDYPIHSVEDRHKLAA 240
           EAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELYNQDYPIHSVEDRHKLAA
Sbjct: 181 EAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELYNQDYPIHSVEDRHKLAA 240

Query: 241 QGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAPDYRVHIISFKDPN 300
           QGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAPDYRVHIISFKDPN
Sbjct: 241 QGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAPDYRVHIISFKDPN 300

Query: 301 PMHIDATFNIIGPGIVLSNPDRPCHQIDLFKKAGWTIITPPTPIIPDDHPLWMSSKWLSM 360
           PMHIDATFNIIGPGIVLSNPDRPCHQIDLFKKAGWTIITPPTPIIPDDHPLWMSSKWLSM
Sbjct: 301 PMHIDATFNIIGPGIVLSNPDRPCHQIDLFKKAGWTIITPPTPIIPDDHPLWMSSKWLSM 360

Query: 361 NVLMLDEKRVMVDANEVPIQKMFEKLGITTIKVNIRNANSLGGGFHCWTCDVRRRGTLQS 420
           NVLMLDEKRVMVDANEVPIQKMFEKLGITTIKVNIRNANSLGGGFHCWTCDVRRRGTLQS
Sbjct: 361 NVLMLDEKRVMVDANEVPIQKMFEKLGITTIKVNIRNANSLGGGFHCWTCDVRRRGTLQS 420

Query: 421 YLD 423
           YLD
Sbjct: 421 YLD 423


>gi|154689719 hypothetical protein LOC23231 [Homo sapiens]
          Length = 1132

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 2    LRVRCLRGGSRGAEAVHYIGSRLGRTLTGWVQRTFQSTQAATASSRNSCAADDKATEPL- 60
            L +R L G    +  ++++G+ L   L  W  + FQS  A+    R S A+ D AT    
Sbjct: 1048 LHLRLLWGAILHSALIYFLGTFLLSILIAWTVQYFQSVSASDPPPRPSQASPDTATSTAS 1107

Query: 61   PKDCPVSSYNEWD 73
            P   P +  ++ D
Sbjct: 1108 PAVTPAADASDQD 1120


>gi|98991767 mitogen-activated protein kinase kinase kinase 7
           interacting protein 3 [Homo sapiens]
          Length = 712

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 10/118 (8%)

Query: 37  QSTQAATASSRNSCAADDKATEPLPKDCPVSSYNEWDPLEEVIVGRAENACVPPFTIEVK 96
           Q+ Q +  S +           P P  CP S ++   P  +V   +  +  +PP      
Sbjct: 273 QNYQPSQYSPKQQQIPQSAYHSPPPSQCP-SPFSS--PQHQVQPSQLGHIFMPPSPSTTP 329

Query: 97  ANTYEKYWPFYQKQGGH------YFPKDHLKKAVAEIEEMCNILKTEGVTVRR-PDPI 147
            + Y++  P YQKQG H      Y      K ++ +IE      +  G  + R P PI
Sbjct: 330 PHPYQQGPPSYQKQGSHSVAYLPYTASSLSKGSMKKIEITVEPSQRPGTAINRSPSPI 387


>gi|5729718 trophoblast glycoprotein [Homo sapiens]
          Length = 420

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 6  CLRGGSRGAEAVHYIGSRLGRTLTGWVQRTFQSTQAAT-ASSRNSCAADDKATEPLPKDC 64
          C RG + G   +    +RL   L GWV  +  ++ A++ +SS    A+   A  PLP  C
Sbjct: 5  CSRGPAAGDGRLRL--ARLALVLLGWVSSSSPTSSASSFSSSAPFLASAVSAQPPLPDQC 62

Query: 65 P 65
          P
Sbjct: 63 P 63


>gi|14670362 POZ (BTB) and AT hook containing zinc finger 1 long A
           isoform [Homo sapiens]
          Length = 641

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 15/92 (16%)

Query: 118 DHLKKAVAEIEEMCNILKTEGVTVRRPDPIDWSLKY---------KTPDFES-TGLYS-- 165
           DHLKK        C+I   EG      DPI+ S  Y         KTP+ +S  G +S  
Sbjct: 484 DHLKKHSEGPSNFCSICNREGQKCSHQDPIESSDSYGDLSDASDLKTPEKQSANGSFSCD 543

Query: 166 -AMPRDILIVVGNEIIEAPMAWRSRFFEYRAY 196
            A+P++ +   G +    P      FF  ++Y
Sbjct: 544 MAVPKNKMESDGEKKYPCPEC--GSFFRSKSY 573


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,443,819
Number of Sequences: 37866
Number of extensions: 801210
Number of successful extensions: 1480
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1477
Number of HSP's gapped (non-prelim): 6
length of query: 423
length of database: 18,247,518
effective HSP length: 105
effective length of query: 318
effective length of database: 14,271,588
effective search space: 4538364984
effective search space used: 4538364984
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.