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Search of human proteins with 4503909
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503909 guanidinoacetate N-methyltransferase isoform a [Homo
sapiens]
(236 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503909 guanidinoacetate N-methyltransferase isoform a [Homo ... 496 e-141
gi|20336212 guanidinoacetate N-methyltransferase isoform b [Homo... 404 e-113
gi|156627563 regulator of G-protein signaling 7 [Homo sapiens] 30 1.8
gi|8923009 non-SMC element 4 homolog A [Homo sapiens] 28 6.9
gi|14149740 oxysterol-binding protein-like protein 5 isoform a [... 28 9.0
gi|221136766 oxysterol-binding protein-like protein 5 isoform b ... 28 9.0
gi|22035609 oxysterol-binding protein-like protein 5 isoform b [... 28 9.0
gi|161377433 methyltransferase like 8 [Homo sapiens] 28 9.0
>gi|4503909 guanidinoacetate N-methyltransferase isoform a [Homo
sapiens]
Length = 236
Score = 496 bits (1278), Expect = e-141
Identities = 236/236 (100%), Positives = 236/236 (100%)
Query: 1 MSAPSATPIFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSK 60
MSAPSATPIFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSK
Sbjct: 1 MSAPSATPIFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSK 60
Query: 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV 120
GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV
Sbjct: 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV 120
Query: 121 APTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKS 180
APTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKS
Sbjct: 121 APTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKS 180
Query: 181 KYSDITIMFEETQVPALLEAGFRRENIRTEVMALVPPADCRYYAFPQMITPLVTKG 236
KYSDITIMFEETQVPALLEAGFRRENIRTEVMALVPPADCRYYAFPQMITPLVTKG
Sbjct: 181 KYSDITIMFEETQVPALLEAGFRRENIRTEVMALVPPADCRYYAFPQMITPLVTKG 236
>gi|20336212 guanidinoacetate N-methyltransferase isoform b [Homo
sapiens]
Length = 269
Score = 404 bits (1039), Expect = e-113
Identities = 190/190 (100%), Positives = 190/190 (100%)
Query: 1 MSAPSATPIFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSK 60
MSAPSATPIFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSK
Sbjct: 1 MSAPSATPIFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSK 60
Query: 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV 120
GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV
Sbjct: 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV 120
Query: 121 APTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKS 180
APTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKS
Sbjct: 121 APTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKS 180
Query: 181 KYSDITIMFE 190
KYSDITIMFE
Sbjct: 181 KYSDITIMFE 190
>gi|156627563 regulator of G-protein signaling 7 [Homo sapiens]
Length = 487
Score = 30.0 bits (66), Expect = 1.8
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 15/140 (10%)
Query: 53 LAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVF--QRLRDWAPRQTHKV 110
L A+ RV GFGM + + P+ ++ + F + LR W + K
Sbjct: 316 LEASKEPSQQRVKRWGFGM----DEALKDPVGREQFLKFLESEFSSENLRFWLAVEDLKK 371
Query: 111 IPLKG-------LWED-VAPTLPDG-HFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLK 161
P+K +W++ +AP P + D YD + + + F + H ++L+K
Sbjct: 372 RPIKEVPSRVQEIWQEFLAPGAPSAINLDSKSYDKTTQNVKEPGRYTFEDAQEHIYKLMK 431
Query: 162 PGGVLTYCNLTSWGELMKSK 181
+ +++ EL+++K
Sbjct: 432 SDSYPRFIRSSAYQELLQAK 451
>gi|8923009 non-SMC element 4 homolog A [Homo sapiens]
Length = 385
Score = 28.1 bits (61), Expect = 6.9
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 19/118 (16%)
Query: 57 ASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECND-------------GVFQRLRDWA 103
A K VLE + S+ +EA +D H+++ +D F LR
Sbjct: 106 AGDKLTEVLEEANTLFNEVSRAREAVLDAHFLVLASDLGIEKAKQLRSDLSSFDMLRYVE 165
Query: 104 PRQTHK-VIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLL 160
TH V PL+ E++ F+ I+YD++ + T T + F K H F L
Sbjct: 166 TLLTHMGVNPLEA--EELIRDEDSPDFEFIVYDSWKI---TGRTAENTFNKTHTFHFL 218
>gi|14149740 oxysterol-binding protein-like protein 5 isoform a
[Homo sapiens]
Length = 879
Score = 27.7 bits (60), Expect = 9.0
Identities = 36/134 (26%), Positives = 52/134 (38%), Gaps = 15/134 (11%)
Query: 118 EDVAPTLPDGHFDGILYDTYPL---SEETWHTHQFNFIKNHAFRLLKPGGVLTYCN---- 170
ED T+P H GILY T L + T + NF F+L G T N
Sbjct: 528 EDYTLTMPYAHCKGILYGTMTLELGGKVTIECAKNNFQAQLEFKLKPFFGGSTSINQISG 587
Query: 171 -LTSWGELMKSKYS----DITIMFEETQVPALL---EAGFRRENIRTEVMALVPPADCRY 222
+TS E++ S D+ I E + AL RR+ +R + L +
Sbjct: 588 KITSGEEVLASLSGHWDRDVFIKEEGSGSSALFWTPSGEVRRQRLRQHTVPLEEQTELES 647
Query: 223 YAFPQMITPLVTKG 236
Q +T ++KG
Sbjct: 648 ERLWQHVTRAISKG 661
>gi|221136766 oxysterol-binding protein-like protein 5 isoform b
[Homo sapiens]
Length = 811
Score = 27.7 bits (60), Expect = 9.0
Identities = 36/134 (26%), Positives = 52/134 (38%), Gaps = 15/134 (11%)
Query: 118 EDVAPTLPDGHFDGILYDTYPL---SEETWHTHQFNFIKNHAFRLLKPGGVLTYCN---- 170
ED T+P H GILY T L + T + NF F+L G T N
Sbjct: 460 EDYTLTMPYAHCKGILYGTMTLELGGKVTIECAKNNFQAQLEFKLKPFFGGSTSINQISG 519
Query: 171 -LTSWGELMKSKYS----DITIMFEETQVPALL---EAGFRRENIRTEVMALVPPADCRY 222
+TS E++ S D+ I E + AL RR+ +R + L +
Sbjct: 520 KITSGEEVLASLSGHWDRDVFIKEEGSGSSALFWTPSGEVRRQRLRQHTVPLEEQTELES 579
Query: 223 YAFPQMITPLVTKG 236
Q +T ++KG
Sbjct: 580 ERLWQHVTRAISKG 593
>gi|22035609 oxysterol-binding protein-like protein 5 isoform b
[Homo sapiens]
Length = 811
Score = 27.7 bits (60), Expect = 9.0
Identities = 36/134 (26%), Positives = 52/134 (38%), Gaps = 15/134 (11%)
Query: 118 EDVAPTLPDGHFDGILYDTYPL---SEETWHTHQFNFIKNHAFRLLKPGGVLTYCN---- 170
ED T+P H GILY T L + T + NF F+L G T N
Sbjct: 460 EDYTLTMPYAHCKGILYGTMTLELGGKVTIECAKNNFQAQLEFKLKPFFGGSTSINQISG 519
Query: 171 -LTSWGELMKSKYS----DITIMFEETQVPALL---EAGFRRENIRTEVMALVPPADCRY 222
+TS E++ S D+ I E + AL RR+ +R + L +
Sbjct: 520 KITSGEEVLASLSGHWDRDVFIKEEGSGSSALFWTPSGEVRRQRLRQHTVPLEEQTELES 579
Query: 223 YAFPQMITPLVTKG 236
Q +T ++KG
Sbjct: 580 ERLWQHVTRAISKG 593
>gi|161377433 methyltransferase like 8 [Homo sapiens]
Length = 407
Score = 27.7 bits (60), Expect = 9.0
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 63 RVLEVGFGMAIAA----SKVQEAPIDEHWIIECNDGVFQRLRDWAP-RQTHKVIPLKGLW 117
R+LEVG G + + ++ +P + + G + ++ + R T + +
Sbjct: 199 RILEVGCGAGNSVFPILNTLENSPESFLYCCDFASGAVELVKSHSSYRATQCFAFVHDVC 258
Query: 118 EDVAP-TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTY 168
+D P PDG D IL + LS + H + + N +LLKPGG+L +
Sbjct: 259 DDGLPYPFPDGILDVILL-VFVLS--SIHPDRMQGVVNRLSKLLKPGGMLLF 307
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,877,268
Number of Sequences: 37866
Number of extensions: 436795
Number of successful extensions: 963
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 961
Number of HSP's gapped (non-prelim): 8
length of query: 236
length of database: 18,247,518
effective HSP length: 99
effective length of query: 137
effective length of database: 14,498,784
effective search space: 1986333408
effective search space used: 1986333408
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.