Guide to the Human Genome
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Name: FGF8 Sequence: fasta or formatted (233aa) NCBI GI: 15147348
Description:

fibroblast growth factor 8 isoform E precursor

Referenced in:

Fibroblast Growth Factors
Stem Cells and Early Development

Other entries for this name:
alt prot [244aa] fibroblast growth factor 8 isoform F precursor
alt prot [204aa] fibroblast growth factor 8 isoform A precursor
alt prot [215aa] fibroblast growth factor 8 isoform B precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         15           1
 C cysteine            1.7          4           1
 D aspartate           2.1          5           1
 E glutamate           6.0         14           1
 F phenylalanine       3.9          9           1
 G glycine             8.6         20           1
 H histidine           3.0          7           2
 I isoleucine          2.6          6           1
 K lysine              6.0         14           2
 L leucine            10.7         25           3
 M methionine          2.1          5           1
 N asparagine          3.4          8           2
 P proline             4.7         11           2
 Q glutamine           6.0         14           2
 R arginine           11.2         26           2
 S serine              6.4         15           1
 T threonine           6.0         14           2
 V valine              5.2         12           1
 W tryptophan          0.9          2           1
 Y tyrosine            3.0          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibroblast growth factor 8 isoform E precursor [Homo... 
FGF8                  0.980   fibroblast growth factor 8 isoform F precursor [Homo...
FGF8                  0.846   fibroblast growth factor 8 isoform B precursor 
FGF8                  0.837   fibroblast growth factor 8 isoform A precursor [Homo...
FGF17                 0.472   fibroblast growth factor 17 precursor 
FGF18                 0.430   fibroblast growth factor 18 precursor 
FGF9                  0.109   fibroblast growth factor 9 precursor 
FGF6                  0.105   fibroblast growth factor 6 precursor 
FGF16                 0.105   fibroblast growth factor 16 
FGF20                 0.102   fibroblast growth factor 20 
FGF2                  0.096   fibroblast growth factor 2 
FGF7                  0.094   fibroblast growth factor 7 precursor 
FGF4                  0.087   fibroblast growth factor 4 precursor 
FGF10                 0.078   fibroblast growth factor 10 precursor 
FGF3                  0.071   fibroblast growth factor 3 precursor 
FGF13                 0.067   fibroblast growth factor 13 isoform 3 
FGF13                 0.067   fibroblast growth factor 13 isoform 3 
FGF13                 0.067   fibroblast growth factor 13 isoform 2 
FGF13                 0.067   fibroblast growth factor 13 isoform 4 
FGF13                 0.067   fibroblast growth factor 13 isoform 1 
FGF13                 0.067   fibroblast growth factor 13 isoform 5 
FGF1                  0.065   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.065   fibroblast growth factor 1 (acidic) isoform 1 proprot...
FGF1                  0.065   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.065   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF5                  0.062   fibroblast growth factor 5 isoform 1 precursor [Homo...
FGF14                 0.053   fibroblast growth factor 14 isoform 1B 
FGF14                 0.053   fibroblast growth factor 14 isoform 1A 
FGF22                 0.053   fibroblast growth factor 22 precursor 
FGF11                 0.051   fibroblast growth factor 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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