Guide to the Human Genome
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Name: FGF13 Sequence: fasta or formatted (245aa) NCBI GI: 4758366
Description:

fibroblast growth factor 13 isoform 1

Referenced in:

Fibroblast Growth Factors

Other entries for this name:
alt prot [192aa] fibroblast growth factor 13 isoform 5
alt prot [199aa] fibroblast growth factor 13 isoform 4
alt prot [255aa] fibroblast growth factor 13 isoform 2
alt prot [226aa] fibroblast growth factor 13 isoform 3
alt prot [226aa] fibroblast growth factor 13 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         12           3
 C cysteine            1.6          4           1
 D aspartate           2.4          6           1
 E glutamate           5.7         14           1
 F phenylalanine       3.3          8           1
 G glycine             7.8         19           2
 H histidine           2.0          5           1
 I isoleucine          3.3          8           1
 K lysine             10.6         26           2
 L leucine             8.6         21           1
 M methionine          2.4          6           1
 N asparagine          4.5         11           1
 P proline             4.1         10           1
 Q glutamine           4.5         11           3
 R arginine            6.5         16           5
 S serine             11.0         27           2
 T threonine           5.7         14           1
 V valine              5.7         14           2
 W tryptophan          0.4          1           1
 Y tyrosine            4.9         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibroblast growth factor 13 isoform 1 
FGF13                 0.746   fibroblast growth factor 13 isoform 4 
FGF13                 0.746   fibroblast growth factor 13 isoform 5 
FGF13                 0.744   fibroblast growth factor 13 isoform 3 
FGF13                 0.744   fibroblast growth factor 13 isoform 3 
FGF13                 0.744   fibroblast growth factor 13 isoform 2 
FGF14                 0.673   fibroblast growth factor 14 isoform 1A 
FGF12                 0.630   fibroblast growth factor 12 isoform 1 
FGF14                 0.547   fibroblast growth factor 14 isoform 1B 
FGF12                 0.511   fibroblast growth factor 12 isoform 2 
FGF11                 0.476   fibroblast growth factor 11 
FGF9                  0.207   fibroblast growth factor 9 precursor 
FGF20                 0.199   fibroblast growth factor 20 
FGF16                 0.192   fibroblast growth factor 16 
FGF10                 0.158   fibroblast growth factor 10 precursor 
FGF5                  0.152   fibroblast growth factor 5 isoform 1 precursor [Homo...
FGF7                  0.147   fibroblast growth factor 7 precursor 
FGF3                  0.141   fibroblast growth factor 3 precursor 
FGF6                  0.139   fibroblast growth factor 6 precursor 
FGF4                  0.130   fibroblast growth factor 4 precursor 
FGF1                  0.118   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.118   fibroblast growth factor 1 (acidic) isoform 1 proprot...
FGF1                  0.118   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.118   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF22                 0.118   fibroblast growth factor 22 precursor 
FGF2                  0.094   fibroblast growth factor 2 
FGF18                 0.071   fibroblast growth factor 18 precursor 
FGF8                  0.064   fibroblast growth factor 8 isoform A precursor [Homo...
FGF8                  0.064   fibroblast growth factor 8 isoform B precursor 
FGF8                  0.064   fibroblast growth factor 8 isoform E precursor [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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