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Search of human proteins with 41406059
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|41406059 MOB1, Mps One Binder kinase activator-like 2C
isoform 1 [Homo sapiens]
(268 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41406059 MOB1, Mps One Binder kinase activator-like 2C isofor... 561 e-160
gi|41406061 MOB1, Mps One Binder kinase activator-like 2C isofor... 451 e-127
gi|18677731 MOB-LAK [Homo sapiens] 354 4e-98
gi|41350330 MOB1, Mps One Binder kinase activator-like 2B [Homo ... 350 6e-97
gi|148747437 Mob4B protein [Homo sapiens] 247 9e-66
gi|27735029 MOB1, Mps One Binder kinase activator-like 1A [Homo ... 241 4e-64
gi|34594669 HCCA2 protein [Homo sapiens] 131 5e-31
gi|155030224 Mps One Binder kinase activator-like 3 isoform 3 [H... 47 1e-05
gi|41349451 Mps One Binder kinase activator-like 3 isoform 2 [Ho... 44 1e-04
gi|41349449 Mps One Binder kinase activator-like 3 isoform 1 [Ho... 44 1e-04
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 30 1.7
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 30 1.7
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 30 1.7
gi|54792138 helicase with zinc finger domain [Homo sapiens] 30 2.2
gi|5454168 RanBP-type and C3HC4-type zinc finger containing 1 is... 29 3.8
gi|144953898 RanBP-type and C3HC4-type zinc finger containing 1 ... 29 3.8
gi|68160937 tripartite motif-containing 25 [Homo sapiens] 29 4.9
>gi|41406059 MOB1, Mps One Binder kinase activator-like 2C isoform 1
[Homo sapiens]
Length = 268
Score = 561 bits (1447), Expect = e-160
Identities = 268/268 (100%), Positives = 268/268 (100%)
Query: 1 MKRRNLFALETGVPPWGLLWVRSRRVGMDEMTFHIWYPQVRAPGQQPQAQLAMALCLKQV 60
MKRRNLFALETGVPPWGLLWVRSRRVGMDEMTFHIWYPQVRAPGQQPQAQLAMALCLKQV
Sbjct: 1 MKRRNLFALETGVPPWGLLWVRSRRVGMDEMTFHIWYPQVRAPGQQPQAQLAMALCLKQV 60
Query: 61 FAKDKTFRPRKRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDWIAVHVVDFF 120
FAKDKTFRPRKRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDWIAVHVVDFF
Sbjct: 61 FAKDKTFRPRKRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDWIAVHVVDFF 120
Query: 121 NRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMALLMDWIEGL 180
NRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMALLMDWIEGL
Sbjct: 121 NRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMALLMDWIEGL 180
Query: 181 INDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVHVYIHHFDSILSMGAEAHVNTCYKH 240
INDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVHVYIHHFDSILSMGAEAHVNTCYKH
Sbjct: 181 INDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVHVYIHHFDSILSMGAEAHVNTCYKH 240
Query: 241 FYYFIREFSLVDQRELEPLREMTERICH 268
FYYFIREFSLVDQRELEPLREMTERICH
Sbjct: 241 FYYFIREFSLVDQRELEPLREMTERICH 268
>gi|41406061 MOB1, Mps One Binder kinase activator-like 2C isoform 2
[Homo sapiens]
Length = 216
Score = 451 bits (1161), Expect = e-127
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 53 MALCLKQVFAKDKTFRPRKRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDWI 112
MALCLKQVFAKDKTFRPRKRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDWI
Sbjct: 1 MALCLKQVFAKDKTFRPRKRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDWI 60
Query: 113 AVHVVDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMAL 172
AVHVVDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMAL
Sbjct: 61 AVHVVDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMAL 120
Query: 173 LMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVHVYIHHFDSILSMGAEA 232
LMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVHVYIHHFDSILSMGAEA
Sbjct: 121 LMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVHVYIHHFDSILSMGAEA 180
Query: 233 HVNTCYKHFYYFIREFSLVDQRELEPLREMTERICH 268
HVNTCYKHFYYFIREFSLVDQRELEPLREMTERICH
Sbjct: 181 HVNTCYKHFYYFIREFSLVDQRELEPLREMTERICH 216
>gi|18677731 MOB-LAK [Homo sapiens]
Length = 217
Score = 354 bits (909), Expect = 4e-98
Identities = 157/212 (74%), Positives = 188/212 (88%)
Query: 57 LKQVFAKDKTFRPRKRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDWIAVHV 116
LKQVF KDKTFRP+++FEPGTQRFEL+KKAQASL +GLDLR V+LPPGE+++DW+AVHV
Sbjct: 6 LKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLNDWVAVHV 65
Query: 117 VDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMALLMDW 176
VDFFNR+NLIYGT+++ C+E SCPVM+GGP+YEYRWQDE ++R+P LSAPRYM LLMDW
Sbjct: 66 VDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRYMDLLMDW 125
Query: 177 IEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVHVYIHHFDSILSMGAEAHVNT 236
IE IN+E++FPT VG PFPKNF Q KIL+RLFRVFVHVYIHHFD I MG+EAHVNT
Sbjct: 126 IEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMGSEAHVNT 185
Query: 237 CYKHFYYFIREFSLVDQRELEPLREMTERICH 268
CYKHFYYF++EF L+D +ELEPL+EMT R+CH
Sbjct: 186 CYKHFYYFVKEFGLIDTKELEPLKEMTARMCH 217
>gi|41350330 MOB1, Mps One Binder kinase activator-like 2B [Homo
sapiens]
Length = 216
Score = 350 bits (899), Expect = 6e-97
Identities = 155/216 (71%), Positives = 191/216 (88%)
Query: 53 MALCLKQVFAKDKTFRPRKRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDWI 112
M++ LKQVF KDKTFRP+++FEPGTQRFEL+K+AQASL SG+DL++ V+LP GE+ +DW+
Sbjct: 1 MSIALKQVFNKDKTFRPKRKFEPGTQRFELHKRAQASLNSGVDLKAAVQLPSGEDQNDWV 60
Query: 113 AVHVVDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMAL 172
AVHVVDFFNRINLIYGT+ E C+E +CPVM+GGP+YEYRWQD+ +Y++P L AP+YM L
Sbjct: 61 AVHVVDFFNRINLIYGTICEFCTERTCPVMSGGPKYEYRWQDDLKYKKPTALPAPQYMNL 120
Query: 173 LMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVHVYIHHFDSILSMGAEA 232
LMDWIE IN+EE+FPT VGVPFPKNF Q+C KIL RLFRVFVHVYIHHFD ++ MGAEA
Sbjct: 121 LMDWIEVQINNEEIFPTCVGVPFPKNFLQICKKILCRLFRVFVHVYIHHFDRVIVMGAEA 180
Query: 233 HVNTCYKHFYYFIREFSLVDQRELEPLREMTERICH 268
HVNTCYKHFYYF+ E +L+D++ELEPL+EMT R+CH
Sbjct: 181 HVNTCYKHFYYFVTEMNLIDRKELEPLKEMTSRMCH 216
>gi|148747437 Mob4B protein [Homo sapiens]
Length = 216
Score = 247 bits (630), Expect = 9e-66
Identities = 106/202 (52%), Positives = 154/202 (76%), Gaps = 1/202 (0%)
Query: 65 KTFRPRKRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDWIAVHVVDFFNRIN 124
KTF+P+K G+ ++EL K A+A+L SG +LR V LP GE++++WIAV+ VDFFN+IN
Sbjct: 11 KTFKPKKNIPEGSHQYELLKHAEATLGSG-NLRQAVMLPEGEDLNEWIAVNTVDFFNQIN 69
Query: 125 LIYGTMAERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMALLMDWIEGLINDE 184
++YGT+ E C+E SCPVM+ GPRYEY W D ++P K SAP+Y+ LM W++ ++DE
Sbjct: 70 MLYGTITEFCTEASCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDE 129
Query: 185 EVFPTRVGVPFPKNFQQVCTKILTRLFRVFVHVYIHHFDSILSMGAEAHVNTCYKHFYYF 244
+FP+++GVPFPKNF V IL RLFRV+ H+Y HFDS++ + EAH+NT +KHF +F
Sbjct: 130 TLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFF 189
Query: 245 IREFSLVDQRELEPLREMTERI 266
++EF+L+D+REL PL+E+ E++
Sbjct: 190 VQEFNLIDRRELAPLQELIEKL 211
>gi|27735029 MOB1, Mps One Binder kinase activator-like 1A [Homo
sapiens]
Length = 216
Score = 241 bits (616), Expect = 4e-64
Identities = 102/202 (50%), Positives = 153/202 (75%), Gaps = 1/202 (0%)
Query: 65 KTFRPRKRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDWIAVHVVDFFNRIN 124
KTF+P+K G+ ++EL K A+A+L SG +LR V LP GE++++W+AV+ VDFFN+IN
Sbjct: 11 KTFKPKKNIPEGSHQYELLKHAEATLGSG-NLRMAVMLPEGEDLNEWVAVNTVDFFNQIN 69
Query: 125 LIYGTMAERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMALLMDWIEGLINDE 184
++YGT+ + C+E SCPVM+ GP+YEY W D ++P K SAP+Y+ LM W++ ++DE
Sbjct: 70 MLYGTITDFCTEESCPVMSAGPKYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDE 129
Query: 185 EVFPTRVGVPFPKNFQQVCTKILTRLFRVFVHVYIHHFDSILSMGAEAHVNTCYKHFYYF 244
+FP+++GVPFPKNF V IL RLFRV+ H+Y HFD ++ + EAH+NT +KHF +F
Sbjct: 130 TLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDPVIQLQEEAHLNTSFKHFIFF 189
Query: 245 IREFSLVDQRELEPLREMTERI 266
++EF+L+D+REL PL+E+ E++
Sbjct: 190 VQEFNLIDRRELAPLQELIEKL 211
>gi|34594669 HCCA2 protein [Homo sapiens]
Length = 237
Score = 131 bits (330), Expect = 5e-31
Identities = 64/171 (37%), Positives = 102/171 (59%), Gaps = 3/171 (1%)
Query: 97 RSVVRLPPGENIDDWIAVHVVDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDER 156
+ +V LP ++++W+A + FF+ INL Y T++E C+ +C MA +Y W DER
Sbjct: 41 KELVVLPREIDLNEWLASNTTTFFHHINLQYSTISEFCTGETCQTMAVC-NTQYYWYDER 99
Query: 157 QYRRPAKLSAPRYMALLMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVH 216
+ K +AP+Y+ +M ++ L+ DE+VFPT+ G FP +F+ + KI LF V H
Sbjct: 100 G--KKVKCTAPQYVDFVMSSVQKLVTDEDVFPTKYGREFPSSFESLVRKICRHLFHVLAH 157
Query: 217 VYIHHFDSILSMGAEAHVNTCYKHFYYFIREFSLVDQRELEPLREMTERIC 267
+Y HF L++ H+NT Y HF F REF+L+D +E + ++TE +C
Sbjct: 158 IYWAHFKETLALELHGHLNTLYVHFILFAREFNLLDPKETAIMDDLTEVLC 208
>gi|155030224 Mps One Binder kinase activator-like 3 isoform 3 [Homo
sapiens]
Length = 204
Score = 47.4 bits (111), Expect = 1e-05
Identities = 39/189 (20%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 71 KRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDWIAVHVVDFFNRINLIYGTM 130
+R PGT+ + + +A + + ++ P G++ W H+ F +N + +
Sbjct: 11 RRNRPGTKAQYIQQNIRADCSN---IDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKL 67
Query: 131 AERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMALLMDWIEGLINDEEVFPTR 190
C +C M ++ + ++ P + A Y +D L+N + FP+R
Sbjct: 68 QSECHPDTCTQMTATEQWIFLCA---AHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSR 124
Query: 191 VGVPFPKNFQQVCTKILTRLFRVFVHVYIHH---FDSILSMGAEAHVNTCYKHFYYFIRE 247
V + ++ + R++R+F H Y HH FD E C++ F F+ +
Sbjct: 125 VSIK--ESSVAKLGSVCRRIYRIFSHAYFHHRQIFDEY-----ENETFLCHR-FTKFVMK 176
Query: 248 FSLVDQREL 256
++L+ + L
Sbjct: 177 YNLMSKDNL 185
>gi|41349451 Mps One Binder kinase activator-like 3 isoform 2 [Homo
sapiens]
Length = 193
Score = 44.3 bits (103), Expect = 1e-04
Identities = 34/165 (20%), Positives = 70/165 (42%), Gaps = 14/165 (8%)
Query: 95 DLRSVVRLPPGENIDDWIAVHVVDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQD 154
++ ++ P G++ W H+ F +N + + C +C M ++ +
Sbjct: 21 NIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA- 79
Query: 155 ERQYRRPAKLSAPRYMALLMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVF 214
++ P + A Y +D L+N + FP+RV + ++ + R++R+F
Sbjct: 80 --AHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVSIK--ESSVAKLGSVCRRIYRIF 135
Query: 215 VHVYIHH---FDSILSMGAEAHVNTCYKHFYYFIREFSLVDQREL 256
H Y HH FD E C++ F F+ +++L+ + L
Sbjct: 136 SHAYFHHRQIFDEY-----ENETFLCHR-FTKFVMKYNLMSKDNL 174
>gi|41349449 Mps One Binder kinase activator-like 3 isoform 1 [Homo
sapiens]
Length = 225
Score = 44.3 bits (103), Expect = 1e-04
Identities = 34/165 (20%), Positives = 70/165 (42%), Gaps = 14/165 (8%)
Query: 95 DLRSVVRLPPGENIDDWIAVHVVDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQD 154
++ ++ P G++ W H+ F +N + + C +C M ++ +
Sbjct: 53 NIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA- 111
Query: 155 ERQYRRPAKLSAPRYMALLMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVF 214
++ P + A Y +D L+N + FP+RV + ++ + R++R+F
Sbjct: 112 --AHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVSIK--ESSVAKLGSVCRRIYRIF 167
Query: 215 VHVYIHH---FDSILSMGAEAHVNTCYKHFYYFIREFSLVDQREL 256
H Y HH FD E C++ F F+ +++L+ + L
Sbjct: 168 SHAYFHHRQIFDEY-----ENETFLCHR-FTKFVMKYNLMSKDNL 206
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 30.4 bits (67), Expect = 1.7
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 22 RSRRVGMDEMTFHIWYPQVRAPGQQPQAQLAMALCLKQVFAKDKTFRPRKRFEPGTQRFE 81
R+ R DE +FHI+Y + G+Q +A L + C F T P PG +R E
Sbjct: 298 RAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPCSHYRFL---TNGPSS--SPGQER-E 351
Query: 82 LYKKAQASLK 91
L+++ SL+
Sbjct: 352 LFQETLESLR 361
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 30.4 bits (67), Expect = 1.7
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 22 RSRRVGMDEMTFHIWYPQVRAPGQQPQAQLAMALCLKQVFAKDKTFRPRKRFEPGTQRFE 81
R+ R DE +FHI+Y + G+Q +A L + C F T P PG +R E
Sbjct: 290 RAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPCSHYRFL---TNGPSS--SPGQER-E 343
Query: 82 LYKKAQASLK 91
L+++ SL+
Sbjct: 344 LFQETLESLR 353
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 30.4 bits (67), Expect = 1.7
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 22 RSRRVGMDEMTFHIWYPQVRAPGQQPQAQLAMALCLKQVFAKDKTFRPRKRFEPGTQRFE 81
R+ R DE +FHI+Y + G+Q +A L + C F T P PG +R E
Sbjct: 298 RAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPCSHYRFL---TNGPSS--SPGQER-E 351
Query: 82 LYKKAQASLK 91
L+++ SL+
Sbjct: 352 LFQETLESLR 361
>gi|54792138 helicase with zinc finger domain [Homo sapiens]
Length = 1942
Score = 30.0 bits (66), Expect = 2.2
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 226 LSMGAEAHVNTCYKHFYYFIREFSLVDQRELEPLREM 262
L+ AE V T Y F IRE S DQ E L EM
Sbjct: 1561 LTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEM 1597
>gi|5454168 RanBP-type and C3HC4-type zinc finger containing 1
isoform 1 [Homo sapiens]
Length = 468
Score = 29.3 bits (64), Expect = 3.8
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 20/90 (22%)
Query: 4 RNLFALETGVPPWGLLWVRSRRVGMDEMTFH------------IWYPQVRAPGQQPQ--- 48
+++ L+ G PP WV +R+ D+ T H ++ R PQ
Sbjct: 43 KDMVFLDYGFPPVLQQWVIGQRLARDQETLHSHGVRQNGDSAYLYLLSARNTSLNPQELQ 102
Query: 49 --AQLAMALCLKQVFAKDKTFRPRKRFEPG 76
QL M L+ + KD T +PR EPG
Sbjct: 103 RERQLRM---LEDLGFKDLTLQPRGPLEPG 129
>gi|144953898 RanBP-type and C3HC4-type zinc finger containing 1
isoform 2 [Homo sapiens]
Length = 510
Score = 29.3 bits (64), Expect = 3.8
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 20/90 (22%)
Query: 4 RNLFALETGVPPWGLLWVRSRRVGMDEMTFH------------IWYPQVRAPGQQPQ--- 48
+++ L+ G PP WV +R+ D+ T H ++ R PQ
Sbjct: 85 KDMVFLDYGFPPVLQQWVIGQRLARDQETLHSHGVRQNGDSAYLYLLSARNTSLNPQELQ 144
Query: 49 --AQLAMALCLKQVFAKDKTFRPRKRFEPG 76
QL M L+ + KD T +PR EPG
Sbjct: 145 RERQLRM---LEDLGFKDLTLQPRGPLEPG 171
>gi|68160937 tripartite motif-containing 25 [Homo sapiens]
Length = 630
Score = 28.9 bits (63), Expect = 4.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 35 IWYPQVRAPGQQPQAQLAMALCLKQVFAK 63
+W P RA P AQ+A CLK+ K
Sbjct: 89 VWTPPARASAPSPNAQVACDHCLKEAAVK 117
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.140 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,822,473
Number of Sequences: 37866
Number of extensions: 465515
Number of successful extensions: 1115
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1095
Number of HSP's gapped (non-prelim): 17
length of query: 268
length of database: 18,247,518
effective HSP length: 100
effective length of query: 168
effective length of database: 14,460,918
effective search space: 2429434224
effective search space used: 2429434224
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.