Search of human proteins with 40385867

Search of human proteins with 40385867

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|40385867 methionine aminopeptidase 1D [Homo sapiens]
         (335 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|40385867 methionine aminopeptidase 1D [Homo sapiens]               693   0.0  
gi|164420681 methionyl aminopeptidase 1 [Homo sapiens]                254   8e-68
gi|11559925 X-prolyl aminopeptidase (aminopeptidase P) 3, putati...    47   2e-05
gi|124494254 ErbB3-binding protein 1 [Homo sapiens]                    42   6e-04
gi|149589008 peptidase D [Homo sapiens]                                37   0.032
gi|21359929 X-prolyl aminopeptidase (aminopeptidase P) 1, solubl...    35   0.12 
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo...    30   2.3  
gi|9558733 transformer-2 alpha [Homo sapiens]                          30   4.0  
gi|21389427 GA repeat binding protein, beta 2 [Homo sapiens]           29   5.2  

>gi|40385867 methionine aminopeptidase 1D [Homo sapiens]
          Length = 335

 Score =  693 bits (1788), Expect = 0.0
 Identities = 335/335 (100%), Positives = 335/335 (100%)

Query: 1   MAAPSGVHLLVRRGSHRIFSSPLNHIYLHKQSSSQQRRNFFFRRQRDISHSIVLPAAVSS 60
           MAAPSGVHLLVRRGSHRIFSSPLNHIYLHKQSSSQQRRNFFFRRQRDISHSIVLPAAVSS
Sbjct: 1   MAAPSGVHLLVRRGSHRIFSSPLNHIYLHKQSSSQQRRNFFFRRQRDISHSIVLPAAVSS 60

Query: 61  AHPVPKHIKKPDYVTTGIVPDWGDSIEVKNEDQIQGLHQACQLARHVLLLAGKSLKVDMT 120
           AHPVPKHIKKPDYVTTGIVPDWGDSIEVKNEDQIQGLHQACQLARHVLLLAGKSLKVDMT
Sbjct: 61  AHPVPKHIKKPDYVTTGIVPDWGDSIEVKNEDQIQGLHQACQLARHVLLLAGKSLKVDMT 120

Query: 121 TEEIDALVHREIISHNAYPSPLGYGGFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVT 180
           TEEIDALVHREIISHNAYPSPLGYGGFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVT
Sbjct: 121 TEEIDALVHREIISHNAYPSPLGYGGFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVT 180

Query: 181 VYYNGYHGDTSETFLVGNVDECGKKLVEVARRCRDEAIAACRAGAPFSVIGNTISHITHQ 240
           VYYNGYHGDTSETFLVGNVDECGKKLVEVARRCRDEAIAACRAGAPFSVIGNTISHITHQ
Sbjct: 181 VYYNGYHGDTSETFLVGNVDECGKKLVEVARRCRDEAIAACRAGAPFSVIGNTISHITHQ 240

Query: 241 NGFQVCPHFVGHGIGSYFHGHPEIWHHANDSDLPMEEGMAFTIEPIITEGSPEFKVLEDA 300
           NGFQVCPHFVGHGIGSYFHGHPEIWHHANDSDLPMEEGMAFTIEPIITEGSPEFKVLEDA
Sbjct: 241 NGFQVCPHFVGHGIGSYFHGHPEIWHHANDSDLPMEEGMAFTIEPIITEGSPEFKVLEDA 300

Query: 301 WTVVSLDNQRSAQFEHTVLITSRGAQILTKLPHEA 335
           WTVVSLDNQRSAQFEHTVLITSRGAQILTKLPHEA
Sbjct: 301 WTVVSLDNQRSAQFEHTVLITSRGAQILTKLPHEA 335


>gi|164420681 methionyl aminopeptidase 1 [Homo sapiens]
          Length = 386

 Score =  254 bits (649), Expect = 8e-68
 Identities = 127/276 (46%), Positives = 172/276 (62%), Gaps = 8/276 (2%)

Query: 63  PVPKHIKKPDYVTTGIVPDWGDS-------IEVKNEDQIQGLHQACQLARHVLLLAGKSL 115
           PVP +I++PDY    +     +        I++ + + I+G+   C+LAR VL +A   +
Sbjct: 98  PVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEGMRLVCRLAREVLDVAAGMI 157

Query: 116 KVDMTTEEIDALVHREIISHNAYPSPLGYGGFPKSVCTSVNNVLCHGIPDSRPLQDGDII 175
           K  +TTEEID  VH   I+ N YPSPL Y  FPKS CTSVN V+CHGIPD RPLQ+GDI+
Sbjct: 158 KPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIV 217

Query: 176 NIDVTVYYNGYHGDTSETFLVGNVDECGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIS 235
           N+D+T+Y NGYHGD +ETF VG VD+  +KLV+    C  +AI A + G  +  +GN I 
Sbjct: 218 NVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQ 277

Query: 236 HITHQNGFQVCPHFVGHGIGSYFHGHPEIWHHANDSDL-PMEEGMAFTIEPIITEGSPEF 294
                NGF V   + GHGI   FH  P + H+A +  +  M+ G  FTIEP+I EG  + 
Sbjct: 278 KHAQANGFSVVRSYCGHGIHKLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQD 337

Query: 295 KVLEDAWTVVSLDNQRSAQFEHTVLITSRGAQILTK 330
           +   D WT V+ D +RSAQFEHT+L+T  G +ILT+
Sbjct: 338 ETWPDGWTAVTRDGKRSAQFEHTLLVTDTGCEILTR 373


>gi|11559925 X-prolyl aminopeptidase (aminopeptidase P) 3, putative
           [Homo sapiens]
          Length = 507

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 24/158 (15%)

Query: 147 FPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLV-GNVDECGKK 205
           +P  V     +   H + +++ ++DG+++ +D     + Y  D + T+ V G       +
Sbjct: 300 YPPVVAGGNRSNTLHYVKNNQLIKDGEMVLLDGGCESSCYVSDITRTWPVNGRFTAPQAE 359

Query: 206 LVEVARRCRDEAIAACRAGAPF--------SVIGNTIS------HITHQNGFQV----CP 247
           L E     + + +A C  G           ++IG  +       +I   N F+     CP
Sbjct: 360 LYEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMKNIKENNAFKAARKYCP 419

Query: 248 HFVGHGIGSYFHGHPEIWHHANDSDLPMEEGMAFTIEP 285
           H VGH +G   H  P++        LP++ GM  TIEP
Sbjct: 420 HHVGHYLGMDVHDTPDM-----PRSLPLQPGMVITIEP 452


>gi|124494254 ErbB3-binding protein 1 [Homo sapiens]
          Length = 394

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 11/102 (10%)

Query: 147 FPKSVCTSVNNVLCHGIP----DSRPLQDGDIINIDVTVYYNGYHGDTSETFLVG---NV 199
           FP S+  SVNN +CH  P        L++GD++ ID+ V+ +G+  + + TF+V      
Sbjct: 76  FPTSI--SVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGT 133

Query: 200 DECGKK--LVEVARRCRDEAIAACRAGAPFSVIGNTISHITH 239
              G+K  +++ A  C + A+   + G   + +    + + H
Sbjct: 134 QVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAH 175


>gi|149589008 peptidase D [Homo sapiens]
          Length = 493

 Score = 36.6 bits (83), Expect = 0.032
 Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 57/268 (21%)

Query: 113 KSLKVDMTTEEIDALVHREIIS-----HNAYPSPLGYGGFPKSVCTSVNNVLCH----GI 163
           K++KV M   E+++L      S     H++Y    G G          N+ + H    G 
Sbjct: 211 KAVKVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGE---------NSAVLHYGHAGA 261

Query: 164 PDSRPLQDGDIINIDVTVYYNGYHGDTSETFLV-GNVDECGKKLVEVARRCRDEAIAACR 222
           P+ R +Q+GD+   D+   Y  +  D + +F   G      K + E   R     + A +
Sbjct: 262 PNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMK 321

Query: 223 AG------------------APFSVIGNTISHITHQN-GFQVCPHFVGHGIGSYFH---G 260
            G                  A   ++  ++  +   + G    PH +GH +G   H   G
Sbjct: 322 PGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGG 381

Query: 261 HPEIWHHANDSDL-------PMEEGMAFTIEP-IITEGSPEFKVLEDAWTVVSLDNQRSA 312
           +PE     ++  L        ++ GM  T+EP I        + L D      L+ +   
Sbjct: 382 YPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQ 441

Query: 313 QF--------EHTVLITSRGAQILTKLP 332
           +F        E  V++T  G ++LT +P
Sbjct: 442 RFRGFGGVRIEEDVVVTDSGIELLTCVP 469


>gi|21359929 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
           [Homo sapiens]
          Length = 623

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 47/189 (24%), Positives = 68/189 (35%), Gaps = 19/189 (10%)

Query: 147 FPKSVCTSVNNVLCHGIP---DSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGNVDECG 203
           FP    T  N  + H  P    +R L   ++  ID    Y     D + T   G      
Sbjct: 381 FPTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYE 440

Query: 204 KKLVEVARRCRDEAIAACRAGAPFSVIGNTISHITHQ----NGFQVCPHFVGHGIGSYFH 259
           K+      +     IA   A  P    G+ +          +G     H  GHG+GS+ +
Sbjct: 441 KECFTYVLKGH---IAVSAAVFPTGTKGHLLDSFARSALWDSGLDYL-HGTGHGVGSFLN 496

Query: 260 GH--PEIWHHANDSDLPMEEGMAFTIEPIITEGSPEFKVLEDAWTVV------SLDNQRS 311
            H  P    +   SD P+E GM  T EP   E       +E+   VV      + +N+ S
Sbjct: 497 VHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGS 556

Query: 312 AQFEHTVLI 320
             FE   L+
Sbjct: 557 LTFEPLTLV 565


>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
           polymerase [Homo sapiens]
          Length = 1327

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 22/139 (15%)

Query: 49  SHSIVLPAAVSSAHPVPKHIKKPDYVTTGIVPDWGDSIEVKNEDQIQGLHQACQLARHVL 108
           SH   L  AV+S HP  K +       T ++   G ++  KN+D +  LH A + A + +
Sbjct: 521 SHETALHCAVASLHPKRKQV-------TELLLRKGANVNEKNKDFMTPLHVAAERAHNDV 573

Query: 109 L--LAGKSLKVDMTTEEIDALVHRE-----------IISHNAYPSPLGYGGFPKSVCTSV 155
           +  L     K++         +HR            ++S+ + PS +   GF  +     
Sbjct: 574 MEVLHKHGAKMNALDTLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGF--TAAQMG 631

Query: 156 NNVLCHGIPDSRPLQDGDI 174
           N  +   + +S P++  D+
Sbjct: 632 NEAVQQILSESTPIRTSDV 650


>gi|9558733 transformer-2 alpha [Homo sapiens]
          Length = 282

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 14/40 (35%), Positives = 23/40 (57%)

Query: 12  RRGSHRIFSSPLNHIYLHKQSSSQQRRNFFFRRQRDISHS 51
           RR SHR ++   +H + H++ S  +     +RR+R  SHS
Sbjct: 61  RRHSHRRYTRSRSHSHSHRRRSRSRSYTPEYRRRRSRSHS 100


>gi|21389427 GA repeat binding protein, beta 2 [Homo sapiens]
          Length = 448

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 201 ECGKKLVEVARRCRDEAIAACRA-GAPFSV--IGNTISHITHQNG 242
           + GK+L+E AR+ +D+ +    A GAPF+   +G +  H+  Q G
Sbjct: 5   DLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYG 49


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,683,679
Number of Sequences: 37866
Number of extensions: 635408
Number of successful extensions: 1203
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1194
Number of HSP's gapped (non-prelim): 11
length of query: 335
length of database: 18,247,518
effective HSP length: 103
effective length of query: 232
effective length of database: 14,347,320
effective search space: 3328578240
effective search space used: 3328578240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.