Search of human proteins with 38570095

Search of human proteins with 38570095

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38570095 hypothetical protein LOC54855 [Homo sapiens]
         (391 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38570095 hypothetical protein LOC54855 [Homo sapiens]              793   0.0  
gi|117414143 hypothetical protein LOC55603 [Homo sapiens]             556   e-158
gi|209862821 hypothetical protein LOC115572 [Homo sapiens]            473   e-133
gi|22749287 hypothetical protein LOC169966 [Homo sapiens]             450   e-127
gi|45439327 periplakin [Homo sapiens]                                  29   8.3  

>gi|38570095 hypothetical protein LOC54855 [Homo sapiens]
          Length = 391

 Score =  793 bits (2049), Expect = 0.0
 Identities = 391/391 (100%), Positives = 391/391 (100%)

Query: 1   MAEESSCTRDCMSFSVLNWDQVSRLHEVLTEVVPIHGRGNFPTLEITLKDIVQTVRSRLE 60
           MAEESSCTRDCMSFSVLNWDQVSRLHEVLTEVVPIHGRGNFPTLEITLKDIVQTVRSRLE
Sbjct: 1   MAEESSCTRDCMSFSVLNWDQVSRLHEVLTEVVPIHGRGNFPTLEITLKDIVQTVRSRLE 60

Query: 61  EAGIKVHDVRLNGSAAGHVLVKDNGLGCKDLDLIFHVALPTEAEFQLVRDVVLCSLLNFL 120
           EAGIKVHDVRLNGSAAGHVLVKDNGLGCKDLDLIFHVALPTEAEFQLVRDVVLCSLLNFL
Sbjct: 61  EAGIKVHDVRLNGSAAGHVLVKDNGLGCKDLDLIFHVALPTEAEFQLVRDVVLCSLLNFL 120

Query: 121 PEGVNKLKISPVTLKEAYVQKLVKVCTDTDRWSLISLSNKNGKNVELKFVDSIRRQFEFS 180
           PEGVNKLKISPVTLKEAYVQKLVKVCTDTDRWSLISLSNKNGKNVELKFVDSIRRQFEFS
Sbjct: 121 PEGVNKLKISPVTLKEAYVQKLVKVCTDTDRWSLISLSNKNGKNVELKFVDSIRRQFEFS 180

Query: 181 VDSFQIILDSLLFFYDCSNNPISEHFHPTVIGESMYGDFEEAFDHLQNRLIATKNPEEIR 240
           VDSFQIILDSLLFFYDCSNNPISEHFHPTVIGESMYGDFEEAFDHLQNRLIATKNPEEIR
Sbjct: 181 VDSFQIILDSLLFFYDCSNNPISEHFHPTVIGESMYGDFEEAFDHLQNRLIATKNPEEIR 240

Query: 241 GGGLLKYSNLLVRDFRPTDQEEIKTLERYMCSRFFIDFPDILEQQRKLETYLQNHFAEEE 300
           GGGLLKYSNLLVRDFRPTDQEEIKTLERYMCSRFFIDFPDILEQQRKLETYLQNHFAEEE
Sbjct: 241 GGGLLKYSNLLVRDFRPTDQEEIKTLERYMCSRFFIDFPDILEQQRKLETYLQNHFAEEE 300

Query: 301 RSKYDYLMILRRVVNESTVCLMGHERRQTLNLISLLALRVLAEQNIIPSATNVTCYYQPA 360
           RSKYDYLMILRRVVNESTVCLMGHERRQTLNLISLLALRVLAEQNIIPSATNVTCYYQPA
Sbjct: 301 RSKYDYLMILRRVVNESTVCLMGHERRQTLNLISLLALRVLAEQNIIPSATNVTCYYQPA 360

Query: 361 PYVSDGNFSNYYVAHPPVTYSQPYPTWLPCN 391
           PYVSDGNFSNYYVAHPPVTYSQPYPTWLPCN
Sbjct: 361 PYVSDGNFSNYYVAHPPVTYSQPYPTWLPCN 391


>gi|117414143 hypothetical protein LOC55603 [Homo sapiens]
          Length = 442

 Score =  556 bits (1432), Expect = e-158
 Identities = 278/388 (71%), Positives = 318/388 (81%), Gaps = 4/388 (1%)

Query: 7   CTRDCMSFSVLNWDQVSRLHEVLTEVVPIHGRGNFPTLEITLKDIVQTVRSRLEEAGIKV 66
           C       +VLNW+QV RL  +L+E +PIHGRGNFPTLE+    IV+ VR RL E  I V
Sbjct: 56  CESPTAHCNVLNWEQVQRLDGILSETIPIHGRGNFPTLELQPSLIVKVVRRRLAEKRIGV 115

Query: 67  HDVRLNGSAAGHVLVKDNGLGCKDLDLIFHVALPTEAEFQLVRDVVLCSLLNFLPEGVNK 126
            DVRLNGSAA HVL +D+GLG KDLDLIF   L  E EFQ V+DVVL  LL+FLPEGVNK
Sbjct: 116 RDVRLNGSAASHVLHQDSGLGYKDLDLIFCADLRGEGEFQTVKDVVLDCLLDFLPEGVNK 175

Query: 127 LKISPVTLKEAYVQKLVKVCTDTDRWSLISLSNKNGKNVELKFVDSIRRQFEFSVDSFQI 186
            KI+P+TLKEAYVQK+VKVC D+DRWSLISLSN +GKNVELKFVDS+RRQFEFSVDSFQI
Sbjct: 176 EKITPLTLKEAYVQKMVKVCNDSDRWSLISLSNNSGKNVELKFVDSLRRQFEFSVDSFQI 235

Query: 187 ILDSLLFFYDCSNNPISEHFHPTVIGESMYGDFEEAFDHLQNRLIATKNPEEIRGGGLLK 246
            LDSLL FY+CS NP++E FHPT+IGES+YGDF+EAFDHL N++IAT+NPEEIRGGGLLK
Sbjct: 236 KLDSLLLFYECSENPMTETFHPTIIGESVYGDFQEAFDHLCNKIIATRNPEEIRGGGLLK 295

Query: 247 YSNLLVRDFRPTDQEEIKTLERYMCSRFFIDFPDILEQQRKLETYLQNHFAEEERSKYDY 306
           Y NLLVR FRP   +EIKTL+RYMCSRFFIDF DI EQQRKLE+YLQNHF   E  KY+Y
Sbjct: 296 YCNLLVRGFRPA-SDEIKTLQRYMCSRFFIDFSDIGEQQRKLESYLQNHFVGLEDRKYEY 354

Query: 307 LMILRRVVNESTVCLMGHERRQTLNLISLLALRVLAEQNIIPSATNVTCYYQPAPYVSDG 366
           LM L  VVNESTVCLMGHERRQTLNLI++LA+RVLA+QN+IP+  NVTCYYQPAPYV+D 
Sbjct: 355 LMTLHGVVNESTVCLMGHERRQTLNLITMLAIRVLADQNVIPNVANVTCYYQPAPYVADA 414

Query: 367 NFSNYYVAHPPVTYS---QPYPTWLPCN 391
           NFSNYY+A     ++   Q Y TWLPCN
Sbjct: 415 NFSNYYIAQVQPVFTCQQQTYSTWLPCN 442


>gi|209862821 hypothetical protein LOC115572 [Homo sapiens]
          Length = 425

 Score =  473 bits (1218), Expect = e-133
 Identities = 241/378 (63%), Positives = 291/378 (76%), Gaps = 3/378 (0%)

Query: 15  SVLNWDQVSRLHEVLTEVVPIHGRGNFPTLEITLKDIVQTVRSRLEEAGIKVHDVRLNGS 74
           S L+W QV RL  +L+E +PIHGRGNFPTL +  + IVQ VRS LEE G+ VH VRL+GS
Sbjct: 50  SGLSWPQVKRLDALLSEPIPIHGRGNFPTLSVQPRQIVQVVRSTLEEQGLHVHSVRLHGS 109

Query: 75  AAGHVLVKDNGLGCKDLDLIFHVALPTEAEFQLVRDVVLCSLLNFLPEGVNKLKISPVTL 134
           AA HVL  ++GLG KDLDL+F V L +EA FQL + VVL  LL+FLP GV++ KI+P+TL
Sbjct: 110 AASHVLHPESGLGYKDLDLVFRVDLRSEASFQLTKAVVLACLLDFLPAGVSRAKITPLTL 169

Query: 135 KEAYVQKLVKVCTDTDRWSLISLSNKNGKNVELKFVDSIRRQFEFSVDSFQIILDSLLFF 194
           KEAYVQKLVKVCTD+DRWSLISLSNK+GKNVELKFVDS+RRQFEFS+DSFQIILDSLL F
Sbjct: 170 KEAYVQKLVKVCTDSDRWSLISLSNKSGKNVELKFVDSVRRQFEFSIDSFQIILDSLLLF 229

Query: 195 YDCSNNPISEHFHPTVIGESMYGDFEEAFDHLQNRLIATKNPEEIRGGGLLKYSNLLVRD 254
             CS+ P+SE FHPTV GES+YGDF EA +HL++R+IAT++PEEIRGGGLLKY +LLVR 
Sbjct: 230 GQCSSTPMSEAFHPTVTGESLYGDFTEALEHLRHRVIATRSPEEIRGGGLLKYCHLLVRG 289

Query: 255 FRPTDQEEIKTLERYMCSRFFIDFPDILEQQRKLETYLQNHFAEEERS-KYDYLMILRRV 313
           FRP    +++ L+RYMCSRFFIDFPD++EQ+R LE YL+ HF   + + +Y  L+ L RV
Sbjct: 290 FRPRPSTDVRALQRYMCSRFFIDFPDLVEQRRTLERYLEAHFGGADAARRYACLVTLHRV 349

Query: 314 VNESTVCLMGHERRQTLNLISLLALRVLAEQNIIPSATNVTCYYQPAPYVSDGNFSNYYV 373
           VNESTVCLM HERRQTL+LI+ LAL+ LAEQ   P+AT    +  P          NYYV
Sbjct: 350 VNESTVCLMNHERRQTLDLIAALALQALAEQG--PAATAALAWRPPGTDGVVPATVNYYV 407

Query: 374 AHPPVTYSQPYPTWLPCN 391
                  +  YPTWLPCN
Sbjct: 408 TPVQPLLAHAYPTWLPCN 425


>gi|22749287 hypothetical protein LOC169966 [Homo sapiens]
          Length = 389

 Score =  450 bits (1158), Expect = e-127
 Identities = 223/372 (59%), Positives = 275/372 (73%), Gaps = 1/372 (0%)

Query: 14  FSVLNWDQVSRLHEVLTEVVPIHGRGNFPTLEITLKDIVQTVRSRLEEAGIKVHDVRLNG 73
           F+ L WDQV  L +VL EV+PIHG+GNFPT+E+  KDI+  V+ +L   GI V D RLNG
Sbjct: 6   FTNLTWDQVITLDQVLDEVIPIHGKGNFPTMEVKPKDIIHVVKDQLIGQGIIVKDARLNG 65

Query: 74  SAAGHVLVKDNGLGCKDLDLIFHVALPTEAEFQLVRDVVLCSLLNFLPEGVNKLKISPVT 133
           S A ++L   NG+  KDLD+IF V LP   EFQ+V+D VL  LL+FLP+ V K K+SP  
Sbjct: 66  SVASYILASHNGISYKDLDVIFGVELPGNEEFQVVKDAVLDCLLDFLPKDVKKEKLSPDI 125

Query: 134 LKEAYVQKLVKVCTDTDRWSLISLSNKNGKNVELKFVDSIRRQFEFSVDSFQIILDSLLF 193
           +K+AYVQKLVKVC   D WSLISLSN  GKN+ELKFV S+RRQFEFSVDSFQI+LD +L 
Sbjct: 126 MKDAYVQKLVKVCNGHDCWSLISLSNNTGKNLELKFVSSLRRQFEFSVDSFQIVLDPMLD 185

Query: 194 FYDCSNNPISEHFHPTVIGESMYGDFEEAFDHLQNRLIATKNPEEIRGGGLLKYSNLLVR 253
           FY   N  +++  +P V+ ESMYGDF+EA  HLQ++LI T+ PEEIRGGGLLKY +LLV 
Sbjct: 186 FYSDKNAKLTKESYPVVVAESMYGDFQEAMTHLQHKLICTRKPEEIRGGGLLKYCSLLVH 245

Query: 254 DFRPTDQEEIKTLERYMCSRFFIDFPDILEQQRKLETYLQNHFAEEERSKYDYLMILRRV 313
            F+P    EIK LERYMCSRFFIDFP I EQQ+K+E+YL NHF  E  +KYDYLM L  V
Sbjct: 246 GFKPACMSEIKNLERYMCSRFFIDFPHIEEQQKKIESYLHNHFIGEGMTKYDYLMTLHGV 305

Query: 314 VNESTVCLMGHERRQTLNLISLLALRVLAEQNIIPSATNVTCYYQPAPY-VSDGNFSNYY 372
           VNESTVCLM +ERRQ L+LI+++AL+VL E NI+P+   VTC+YQPAPY  ++  +  Y 
Sbjct: 306 VNESTVCLMSYERRQILHLITMMALKVLGELNILPNTQKVTCFYQPAPYFAAEARYPIYV 365

Query: 373 VAHPPVTYSQPY 384
           +  PP    QPY
Sbjct: 366 IPEPPPVSFQPY 377


>gi|45439327 periplakin [Homo sapiens]
          Length = 1756

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 7/74 (9%)

Query: 246 KYSNLLVRDFRPTDQEEIKTLERYMCSRFFIDFPDILEQQRKLETYLQNHFAEEERSKYD 305
           +Y NLL+      ++  +K +E Y   +F  D  D  E  RK+++ L   +  + + +Y 
Sbjct: 304 EYLNLLI-----CEESHLKYMEDY--HQFHEDVKDAQELLRKVDSDLNQKYGPDFKDRYQ 356

Query: 306 YLMILRRVVNESTV 319
             ++LR + ++  V
Sbjct: 357 IELLLRELDDQEKV 370


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,695,675
Number of Sequences: 37866
Number of extensions: 636568
Number of successful extensions: 1342
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1334
Number of HSP's gapped (non-prelim): 5
length of query: 391
length of database: 18,247,518
effective HSP length: 104
effective length of query: 287
effective length of database: 14,309,454
effective search space: 4106813298
effective search space used: 4106813298
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.