Search of human proteins with 38570062

Search of human proteins with 38570062

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38570062 hypothetical protein LOC51608 [Homo sapiens]
         (327 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38570062 hypothetical protein LOC51608 [Homo sapiens]              655   0.0  
gi|218749883 alpha 1,2-mannosidase [Homo sapiens]                      32   0.77 
gi|239755174 PREDICTED: similar to solute carrier family 25, mem...    31   1.7  
gi|56699403 solute carrier family 25, member 25 isoform b [Homo ...    31   1.7  
gi|226246540 zinc finger, MYND-type containing 12 isoform 2 [Hom...    30   2.2  
gi|226246519 zinc finger, MYND-type containing 12 isoform 1 [Hom...    30   2.2  
gi|12751491 hypothetical protein LOC65260 [Homo sapiens]               30   2.9  
gi|239756837 PREDICTED: similar to pleckstrin homology domain co...    28   8.5  
gi|239754604 PREDICTED: similar to hCG1802898 [Homo sapiens]           28   8.5  
gi|239751418 PREDICTED: hypothetical protein XP_002347841 [Homo ...    28   8.5  
gi|125988411 tetratricopeptide repeat domain 30B [Homo sapiens]        28   8.5  

>gi|38570062 hypothetical protein LOC51608 [Homo sapiens]
          Length = 327

 Score =  655 bits (1690), Expect = 0.0
 Identities = 327/327 (100%), Positives = 327/327 (100%)

Query: 1   MAAAAAMAEQESARNGGRNRGGVQRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHT 60
           MAAAAAMAEQESARNGGRNRGGVQRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHT
Sbjct: 1   MAAAAAMAEQESARNGGRNRGGVQRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHT 60

Query: 61  EARELMYSGALLFFSHGQQNSAADLSMLVLESLEKAEVEVADELLENLAKVFSLMDPNSP 120
           EARELMYSGALLFFSHGQQNSAADLSMLVLESLEKAEVEVADELLENLAKVFSLMDPNSP
Sbjct: 61  EARELMYSGALLFFSHGQQNSAADLSMLVLESLEKAEVEVADELLENLAKVFSLMDPNSP 120

Query: 121 ERVTFVSRALKWSSGGSGKLGHPRLHQLLALTLWKEQNYCESRYHFLHSADGEGCANMLV 180
           ERVTFVSRALKWSSGGSGKLGHPRLHQLLALTLWKEQNYCESRYHFLHSADGEGCANMLV
Sbjct: 121 ERVTFVSRALKWSSGGSGKLGHPRLHQLLALTLWKEQNYCESRYHFLHSADGEGCANMLV 180

Query: 181 EYSTSRGFRSEVDMFVAQAVLQFLCLKNKSSASVVFTTYTQKHPSIEDGPPFVEPLLNFI 240
           EYSTSRGFRSEVDMFVAQAVLQFLCLKNKSSASVVFTTYTQKHPSIEDGPPFVEPLLNFI
Sbjct: 181 EYSTSRGFRSEVDMFVAQAVLQFLCLKNKSSASVVFTTYTQKHPSIEDGPPFVEPLLNFI 240

Query: 241 WFLLLAVDGGKLTVFTVLCEQYQPSLRRDPMYNEYLDRIGQLFFGVPPKQTSSYGGLLGN 300
           WFLLLAVDGGKLTVFTVLCEQYQPSLRRDPMYNEYLDRIGQLFFGVPPKQTSSYGGLLGN
Sbjct: 241 WFLLLAVDGGKLTVFTVLCEQYQPSLRRDPMYNEYLDRIGQLFFGVPPKQTSSYGGLLGN 300

Query: 301 LLTSLMGSSEQEDGEESPSDGSPIELD 327
           LLTSLMGSSEQEDGEESPSDGSPIELD
Sbjct: 301 LLTSLMGSSEQEDGEESPSDGSPIELD 327


>gi|218749883 alpha 1,2-mannosidase [Homo sapiens]
          Length = 699

 Score = 32.0 bits (71), Expect = 0.77
 Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 1/103 (0%)

Query: 24  QRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHTEARELMYSGALLFFSHGQQNSAA 83
           Q ++G  + +    DY EA +  RT   R+   SK T   EL +        H       
Sbjct: 472 QWIQGGKQETQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAKMDHLVCFLPG 531

Query: 84  DLSMLVLESLEKAEVEVADELLENLAKVFSLMDPN-SPERVTF 125
            L++ V   L  + +E+A EL+E   ++   M+   SPE V F
Sbjct: 532 TLALGVYHGLPASHMELAQELMETCYQMNRQMETGLSPEIVHF 574


>gi|239755174 PREDICTED: similar to solute carrier family 25, member
           25 isoform 1 [Homo sapiens]
          Length = 503

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 18/139 (12%)

Query: 17  GRNRGGVQRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHTEARELMYSGALLFFSH 76
           G  R G+ R EG+L+  V+ GD     Q+    F  Y+ Q    + R       L+F S 
Sbjct: 73  GLRRLGLHRTEGELQKIVQAGDKDLDGQLDFEEFVHYL-QDHEKKLR-------LVFKSL 124

Query: 77  GQQNSAADLSMLVLESLEKAEVEVADELLENLAKVFSLMDPNSPERVTFVSRALKWSSGG 136
            ++N     +  +++SL    V+++++  E   K+   MD N        +  + W+   
Sbjct: 125 DKKNDGRIDAQEIMQSLRDLGVKISEQQAE---KILKSMDKNG-------TMTIDWNEWR 174

Query: 137 SGKLGHPRLHQLLALTLWK 155
              L HP  +    +  WK
Sbjct: 175 DYHLLHPVENIPEIILYWK 193


>gi|56699403 solute carrier family 25, member 25 isoform b [Homo
           sapiens]
          Length = 503

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 18/139 (12%)

Query: 17  GRNRGGVQRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHTEARELMYSGALLFFSH 76
           G  R G+ R EG+L+  V+ GD     Q+    F  Y+ Q    + R       L+F S 
Sbjct: 73  GLRRLGLHRTEGELQKIVQAGDKDLDGQLDFEEFVHYL-QDHEKKLR-------LVFKSL 124

Query: 77  GQQNSAADLSMLVLESLEKAEVEVADELLENLAKVFSLMDPNSPERVTFVSRALKWSSGG 136
            ++N     +  +++SL    V+++++  E   K+   MD N        +  + W+   
Sbjct: 125 DKKNDGRIDAQEIMQSLRDLGVKISEQQAE---KILKSMDKNG-------TMTIDWNEWR 174

Query: 137 SGKLGHPRLHQLLALTLWK 155
              L HP  +    +  WK
Sbjct: 175 DYHLLHPVENIPEIILYWK 193


>gi|226246540 zinc finger, MYND-type containing 12 isoform 2 [Homo
           sapiens]
          Length = 255

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 17/54 (31%), Positives = 26/54 (48%)

Query: 142 HPRLHQLLALTLWKEQNYCESRYHFLHSADGEGCANMLVEYSTSRGFRSEVDMF 195
           H  LH+ L L    ++NY E+RYH  +      CA    +  TS G+    ++F
Sbjct: 61  HSLLHRNLGLLYIAKKNYEEARYHLANDIYFASCAFGTEDIRTSGGYFHLANIF 114


>gi|226246519 zinc finger, MYND-type containing 12 isoform 1 [Homo
           sapiens]
          Length = 365

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 17/54 (31%), Positives = 26/54 (48%)

Query: 142 HPRLHQLLALTLWKEQNYCESRYHFLHSADGEGCANMLVEYSTSRGFRSEVDMF 195
           H  LH+ L L    ++NY E+RYH  +      CA    +  TS G+    ++F
Sbjct: 171 HSLLHRNLGLLYIAKKNYEEARYHLANDIYFASCAFGTEDIRTSGGYFHLANIF 224


>gi|12751491 hypothetical protein LOC65260 [Homo sapiens]
          Length = 231

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)

Query: 161 ESRYHFLHSADGEGCANMLVEYSTSRGFRSEVDMFVAQAVLQFLCLKNKSSAS 213
           E  YH  H  D +GC   LV+Y    G R   D   A  VL+F C +N+ S S
Sbjct: 23  ECNYHCYHEKDPDGCYR-LVDY--LEGIRKNFD--EAAKVLKFNCEENQHSDS 70


>gi|239756837 PREDICTED: similar to pleckstrin homology domain
           containing, family M (with RUN domain) member 1, partial
           [Homo sapiens]
          Length = 623

 Score = 28.5 bits (62), Expect = 8.5
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 59  HTEAR-ELMYSGALLFFSHGQQNSAADLSMLVLESLEKAEVEVADE 103
           H++ R EL++SG  L      Q+ A D   LV E+L+K   +  DE
Sbjct: 155 HSDGRFELVFSGKKLALRASSQDEAEDWLDLVREALQKVRPQQEDE 200


>gi|239754604 PREDICTED: similar to hCG1802898 [Homo sapiens]
          Length = 229

 Score = 28.5 bits (62), Expect = 8.5
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)

Query: 115 MDPNSPERVTFVSRALKWSSGGSGKLG 141
           + P +PE VTF  RAL+  +GG+G+ G
Sbjct: 33  LQPKAPE-VTFARRALRACAGGAGRAG 58


>gi|239751418 PREDICTED: hypothetical protein XP_002347841 [Homo
           sapiens]
          Length = 528

 Score = 28.5 bits (62), Expect = 8.5
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 59  HTEAR-ELMYSGALLFFSHGQQNSAADLSMLVLESLEKAEVEVADE 103
           H++ R EL++SG  L      Q+ A D   LV E+L+K   +  DE
Sbjct: 72  HSDGRFELVFSGKKLALRASSQDEAEDWLDLVREALQKVRPQQEDE 117


>gi|125988411 tetratricopeptide repeat domain 30B [Homo sapiens]
          Length = 665

 Score = 28.5 bits (62), Expect = 8.5
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 7/84 (8%)

Query: 1   MAAAAAMAEQESARNGGRNRGGVQRVEGKLRAS--VEKGDYYEAHQMYRTLFFRYMSQSK 58
           +  + ++ EQ  +R GG   GG    +G++     + K   YEA     + FF  +  S 
Sbjct: 129 LPGSRSLVEQLPSREGGEESGGENETDGQINLGCLLYKEGQYEA---ACSKFFAALQASG 185

Query: 59  HTEARELMYSGALLFFSHGQQNSA 82
           +    +L Y+ AL ++S  Q  SA
Sbjct: 186 YQP--DLSYNLALAYYSSRQYASA 207


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,477,016
Number of Sequences: 37866
Number of extensions: 528746
Number of successful extensions: 1398
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1395
Number of HSP's gapped (non-prelim): 11
length of query: 327
length of database: 18,247,518
effective HSP length: 103
effective length of query: 224
effective length of database: 14,347,320
effective search space: 3213799680
effective search space used: 3213799680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.