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Search of human proteins with 32484987
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32484987 hepatocellular carcinoma-associated antigen 112
[Homo sapiens]
(235 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32484987 hepatocellular carcinoma-associated antigen 112 [Hom... 474 e-134
gi|156416020 transmembrane protein 176B isoform a [Homo sapiens] 106 2e-23
gi|156416018 transmembrane protein 176B isoform a [Homo sapiens] 106 2e-23
gi|156416016 transmembrane protein 176B isoform a [Homo sapiens] 106 2e-23
gi|156416014 transmembrane protein 176B isoform a [Homo sapiens] 106 2e-23
gi|156416022 transmembrane protein 176B isoform b [Homo sapiens] 67 1e-11
gi|239756473 PREDICTED: transmembrane protein 114 [Homo sapiens] 30 1.8
gi|239752599 PREDICTED: transmembrane protein 114, partial [Homo... 30 1.8
gi|226437592 transmembrane protein 114 [Homo sapiens] 30 1.8
gi|87116681 lysophosphatidylcholine acyltransferase 4 [Homo sapi... 29 3.1
gi|149944536 ichthyin protein [Homo sapiens] 29 3.1
gi|4507035 solute carrier family 5 (sodium iodide symporter), me... 29 3.1
gi|23110997 membrane-spanning 4-domains, subfamily A, member 5 [... 29 3.1
gi|239745400 PREDICTED: transmembrane protein 114 [Homo sapiens] 29 4.0
gi|21541824 transducin-like enhancer protein 1 [Homo sapiens] 28 5.2
gi|215983058 magnesium transporter 1 [Homo sapiens] 28 6.8
>gi|32484987 hepatocellular carcinoma-associated antigen 112 [Homo
sapiens]
Length = 235
Score = 474 bits (1220), Expect = e-134
Identities = 235/235 (100%), Positives = 235/235 (100%)
Query: 1 MGTADSDEMAPEAPQHTHIDVHIHQESALAKLLLTCCSALRPRATQARGSSRLLVASWVM 60
MGTADSDEMAPEAPQHTHIDVHIHQESALAKLLLTCCSALRPRATQARGSSRLLVASWVM
Sbjct: 1 MGTADSDEMAPEAPQHTHIDVHIHQESALAKLLLTCCSALRPRATQARGSSRLLVASWVM 60
Query: 61 QIVLGILSAVLGGFFYIRDYTLLVTSGAAIWTGAVAVLAGAAAFIYEKRGGTYWALLRTL 120
QIVLGILSAVLGGFFYIRDYTLLVTSGAAIWTGAVAVLAGAAAFIYEKRGGTYWALLRTL
Sbjct: 61 QIVLGILSAVLGGFFYIRDYTLLVTSGAAIWTGAVAVLAGAAAFIYEKRGGTYWALLRTL 120
Query: 121 LTLAAFSTAIAALKLWNEDFRYGYSYYNSACRISSSSDWNTPAPTQSPEEVRRLHLCTSF 180
LTLAAFSTAIAALKLWNEDFRYGYSYYNSACRISSSSDWNTPAPTQSPEEVRRLHLCTSF
Sbjct: 121 LTLAAFSTAIAALKLWNEDFRYGYSYYNSACRISSSSDWNTPAPTQSPEEVRRLHLCTSF 180
Query: 181 MDMLKALFRTLQAMLLGVWILLLLASLTPLWLYCWRMFPTKGKRDQKEMLEVSGI 235
MDMLKALFRTLQAMLLGVWILLLLASLTPLWLYCWRMFPTKGKRDQKEMLEVSGI
Sbjct: 181 MDMLKALFRTLQAMLLGVWILLLLASLTPLWLYCWRMFPTKGKRDQKEMLEVSGI 235
>gi|156416020 transmembrane protein 176B isoform a [Homo sapiens]
Length = 270
Score = 106 bits (264), Expect = 2e-23
Identities = 74/215 (34%), Positives = 110/215 (51%), Gaps = 15/215 (6%)
Query: 9 MAPEAPQHTHIDVHIHQESALAKLLLTCCSALR--------PRATQARGSSRLLVASWVM 60
MA Q TH++VHIHQESAL +LL S + +T G +L + V
Sbjct: 13 MASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARIGYEQLALG--VT 70
Query: 61 QIVLGILSAVLGGFFYIRDYTLLVTSGAAIWTGAVAVLAGAAAFIYEKRGGTYWALLRTL 120
QI+LG++S VLG + +T+L SG A W G+V + AGA A ++EK G + +L
Sbjct: 71 QILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHPGKLAGYISSL 130
Query: 121 LTLAAFSTAIAALKLWNEDFRYGYSYYNSACRISSSSDWNTPAP-----TQSPEEVRRLH 175
LTLA F+TA+AA+ L F + + + SD P +S E +
Sbjct: 131 LTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMRRSQENQWQKE 190
Query: 176 LCTSFMDMLKALFRTLQAMLLGVWILLLLASLTPL 210
C ++M ML+ LF ++A+ L V +L ++ SL L
Sbjct: 191 ECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSL 225
>gi|156416018 transmembrane protein 176B isoform a [Homo sapiens]
Length = 270
Score = 106 bits (264), Expect = 2e-23
Identities = 74/215 (34%), Positives = 110/215 (51%), Gaps = 15/215 (6%)
Query: 9 MAPEAPQHTHIDVHIHQESALAKLLLTCCSALR--------PRATQARGSSRLLVASWVM 60
MA Q TH++VHIHQESAL +LL S + +T G +L + V
Sbjct: 13 MASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARIGYEQLALG--VT 70
Query: 61 QIVLGILSAVLGGFFYIRDYTLLVTSGAAIWTGAVAVLAGAAAFIYEKRGGTYWALLRTL 120
QI+LG++S VLG + +T+L SG A W G+V + AGA A ++EK G + +L
Sbjct: 71 QILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHPGKLAGYISSL 130
Query: 121 LTLAAFSTAIAALKLWNEDFRYGYSYYNSACRISSSSDWNTPAP-----TQSPEEVRRLH 175
LTLA F+TA+AA+ L F + + + SD P +S E +
Sbjct: 131 LTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMRRSQENQWQKE 190
Query: 176 LCTSFMDMLKALFRTLQAMLLGVWILLLLASLTPL 210
C ++M ML+ LF ++A+ L V +L ++ SL L
Sbjct: 191 ECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSL 225
>gi|156416016 transmembrane protein 176B isoform a [Homo sapiens]
Length = 270
Score = 106 bits (264), Expect = 2e-23
Identities = 74/215 (34%), Positives = 110/215 (51%), Gaps = 15/215 (6%)
Query: 9 MAPEAPQHTHIDVHIHQESALAKLLLTCCSALR--------PRATQARGSSRLLVASWVM 60
MA Q TH++VHIHQESAL +LL S + +T G +L + V
Sbjct: 13 MASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARIGYEQLALG--VT 70
Query: 61 QIVLGILSAVLGGFFYIRDYTLLVTSGAAIWTGAVAVLAGAAAFIYEKRGGTYWALLRTL 120
QI+LG++S VLG + +T+L SG A W G+V + AGA A ++EK G + +L
Sbjct: 71 QILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHPGKLAGYISSL 130
Query: 121 LTLAAFSTAIAALKLWNEDFRYGYSYYNSACRISSSSDWNTPAP-----TQSPEEVRRLH 175
LTLA F+TA+AA+ L F + + + SD P +S E +
Sbjct: 131 LTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMRRSQENQWQKE 190
Query: 176 LCTSFMDMLKALFRTLQAMLLGVWILLLLASLTPL 210
C ++M ML+ LF ++A+ L V +L ++ SL L
Sbjct: 191 ECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSL 225
>gi|156416014 transmembrane protein 176B isoform a [Homo sapiens]
Length = 270
Score = 106 bits (264), Expect = 2e-23
Identities = 74/215 (34%), Positives = 110/215 (51%), Gaps = 15/215 (6%)
Query: 9 MAPEAPQHTHIDVHIHQESALAKLLLTCCSALR--------PRATQARGSSRLLVASWVM 60
MA Q TH++VHIHQESAL +LL S + +T G +L + V
Sbjct: 13 MASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARIGYEQLALG--VT 70
Query: 61 QIVLGILSAVLGGFFYIRDYTLLVTSGAAIWTGAVAVLAGAAAFIYEKRGGTYWALLRTL 120
QI+LG++S VLG + +T+L SG A W G+V + AGA A ++EK G + +L
Sbjct: 71 QILLGVVSCVLGVCLSLGPWTVLSASGCAFWAGSVVIAAGAGAIVHEKHPGKLAGYISSL 130
Query: 121 LTLAAFSTAIAALKLWNEDFRYGYSYYNSACRISSSSDWNTPAP-----TQSPEEVRRLH 175
LTLA F+TA+AA+ L F + + + SD P +S E +
Sbjct: 131 LTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMRRSQENQWQKE 190
Query: 176 LCTSFMDMLKALFRTLQAMLLGVWILLLLASLTPL 210
C ++M ML+ LF ++A+ L V +L ++ SL L
Sbjct: 191 ECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSL 225
>gi|156416022 transmembrane protein 176B isoform b [Homo sapiens]
Length = 233
Score = 67.4 bits (163), Expect = 1e-11
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 38/208 (18%)
Query: 9 MAPEAPQHTHIDVHIHQESALAKLLLTCCSALRPRATQARGSSRLLVASWVMQIVLGILS 68
MA Q TH++VHIHQESAL +LL +A GS
Sbjct: 13 MASRPSQPTHVNVHIHQESALTQLL------------KAGGS------------------ 42
Query: 69 AVLGGFFYIRDYTLLVTSGAAIWTGAVAVLA-GAAAFIYEKRGGTYWALLRTLLTLAAFS 127
L F + T+ T+ A+ V+A GA A ++EK G + +LLTLA F+
Sbjct: 43 --LKKFLFHPGDTVPSTARIGYEQLALGVIAAGAGAIVHEKHPGKLAGYISSLLTLAGFA 100
Query: 128 TAIAALKLWNEDFRYGYSYYNSACRISSSSDWNTPAP-----TQSPEEVRRLHLCTSFMD 182
TA+AA+ L F + + + SD P +S E + C ++M
Sbjct: 101 TAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYRWMRRSQENQWQKEECRAYMQ 160
Query: 183 MLKALFRTLQAMLLGVWILLLLASLTPL 210
ML+ LF ++A+ L V +L ++ SL L
Sbjct: 161 MLRKLFTAIRALFLAVCVLKVIVSLVSL 188
>gi|239756473 PREDICTED: transmembrane protein 114 [Homo sapiens]
Length = 223
Score = 30.0 bits (66), Expect = 1.8
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 45 TQARGSSRLLV--ASWVMQIVLGILSAVLGGF-----FYIRDYTLLVTSGAAIWTGAVAV 97
T + S +LL ++V+ + L ++ V GG F ++ Y LL+ +G GA+
Sbjct: 91 TVSESSRQLLTMHGTFVILLPLSLILMVFGGMTGFLSFLLQAYLLLLLTGILFLFGAMVT 150
Query: 98 LAGAAAFI 105
LAG + +I
Sbjct: 151 LAGISVYI 158
>gi|239752599 PREDICTED: transmembrane protein 114, partial [Homo
sapiens]
Length = 217
Score = 30.0 bits (66), Expect = 1.8
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 45 TQARGSSRLLV--ASWVMQIVLGILSAVLGGF-----FYIRDYTLLVTSGAAIWTGAVAV 97
T + S +LL ++V+ + L ++ V GG F ++ Y LL+ +G GA+
Sbjct: 85 TVSESSRQLLTMHGTFVILLPLSLILMVFGGMTGFLSFLLQAYLLLLLTGILFLFGAMVT 144
Query: 98 LAGAAAFI 105
LAG + +I
Sbjct: 145 LAGISVYI 152
>gi|226437592 transmembrane protein 114 [Homo sapiens]
Length = 223
Score = 30.0 bits (66), Expect = 1.8
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 45 TQARGSSRLLV--ASWVMQIVLGILSAVLGGF-----FYIRDYTLLVTSGAAIWTGAVAV 97
T + S +LL ++V+ + L ++ V GG F ++ Y LL+ +G GA+
Sbjct: 91 TVSESSRQLLTMHGTFVILLPLSLILMVFGGMTGFLSFLLQAYLLLLLTGILFLFGAMVT 150
Query: 98 LAGAAAFI 105
LAG + +I
Sbjct: 151 LAGISVYI 158
>gi|87116681 lysophosphatidylcholine acyltransferase 4 [Homo
sapiens]
Length = 524
Score = 29.3 bits (64), Expect = 3.1
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 9/66 (13%)
Query: 155 SSSDWN----TPAPTQSPEE-VRRLHLCTSFMDMLKALFRTLQAMLLGVWILLLLASLTP 209
S DW TP P SP V LHL + + F L A+L + +LL L
Sbjct: 5 SPGDWAPLDPTPGPPASPNPFVHELHLSR----LQRVKFCLLGALLAPIRVLLAFIVLFL 60
Query: 210 LWLYCW 215
LW + W
Sbjct: 61 LWPFAW 66
>gi|149944536 ichthyin protein [Homo sapiens]
Length = 466
Score = 29.3 bits (64), Expect = 3.1
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 49 GSSRLLVASWVMQIVL-GILSAVLGGFFYIRDYTLLVTSGAAIWTGAVAVLAGAAAFIYE 107
GSS +L ++++V G AV GGF Y++D A W G + + AG A
Sbjct: 133 GSSVILKKKGLLRLVATGATRAVDGGFGYLKD--------AMWWAGFLTMAAGEVA---- 180
Query: 108 KRGGTYWALLRTLLT-LAAFSTAIAAL 133
G Y T++T L A S I+A+
Sbjct: 181 -NFGAYAFAPATVVTPLGALSVLISAI 206
>gi|4507035 solute carrier family 5 (sodium iodide symporter),
member 5 [Homo sapiens]
Length = 643
Score = 29.3 bits (64), Expect = 3.1
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 82 LLVTSGAAIWTGAVAVLAGAAAFIYEKRGGTYWALLRTLLTLAA-FSTAIAALKLWNEDF 140
LLV++G +W G +A + GG A L L+L+A F +A+ L + +E +
Sbjct: 24 LLVSTGIGLWVGLARGGQRSAEDFFT--GGRRLAALPVGLSLSASFMSAVQVLGVPSEAY 81
Query: 141 RYGYSY 146
RYG +
Sbjct: 82 RYGLKF 87
>gi|23110997 membrane-spanning 4-domains, subfamily A, member 5
[Homo sapiens]
Length = 200
Score = 29.3 bits (64), Expect = 3.1
Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 12/105 (11%)
Query: 60 MQIVLGILSAVLGGFFYIR------DYTLLVTSGAAIWTGAVAVLAGAAAFIYEKRGGTY 113
+QI+ GI++ G F + + SG W + + +GA +++
Sbjct: 53 IQILFGIMTFSFGVIFLFTLLKPYPRFPFIFLSGYPFWGSVLFINSGAFLIAVKRKTTET 112
Query: 114 WALLRTLLTLAAFSTAIAALKLW------NEDFRYGYSYYNSACR 152
+L ++ + AIA + L ++++ GYS+ NS C+
Sbjct: 113 LIILSRIMNFLSALGAIAGIILLTFGFILDQNYICGYSHQNSQCK 157
>gi|239745400 PREDICTED: transmembrane protein 114 [Homo sapiens]
Length = 122
Score = 28.9 bits (63), Expect = 4.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 57 SWVMQIVLGILSAVLGGF-----FYIRDYTLLVTSGAAIWTGAVAVLAGAAAFI 105
++V+ + L ++ V GG F ++ Y LL+ +G GA+ LAG + +I
Sbjct: 4 TFVILLPLSLILMVFGGMTGFLSFLLQAYLLLLLTGILFLFGAMVTLAGISVYI 57
>gi|21541824 transducin-like enhancer protein 1 [Homo sapiens]
Length = 770
Score = 28.5 bits (62), Expect = 5.2
Identities = 12/54 (22%), Positives = 28/54 (51%)
Query: 19 IDVHIHQESALAKLLLTCCSALRPRATQARGSSRLLVASWVMQIVLGILSAVLG 72
+++ +H+++ +AK L T C+ + P +Q Q+ + L+A++G
Sbjct: 71 LNIEMHKQTEIAKRLNTICAQVIPFLSQEHQQQVAQAVERAKQVTMAELNAIIG 124
>gi|215983058 magnesium transporter 1 [Homo sapiens]
Length = 367
Score = 28.1 bits (61), Expect = 6.8
Identities = 22/90 (24%), Positives = 32/90 (35%), Gaps = 23/90 (25%)
Query: 46 QARGSSRLLVASWVMQ-----------------IVLGILSAVLGGFFYIRDYTLLVTSGA 88
Q RG S +A W+ ++LG+L AV+GG Y+R +
Sbjct: 189 QVRGFSAEQIARWIADRTDVNIRVIRPPNYAGPLMLGLLLAVIGGLVYLRRSNMEFLFNK 248
Query: 89 AIWTGAVAVLAGAAAFIYEKRGGTYWALLR 118
W A A F+ G W +R
Sbjct: 249 TGWAFA------ALCFVLAMTSGQMWNHIR 272
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.134 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,543,932
Number of Sequences: 37866
Number of extensions: 323521
Number of successful extensions: 1198
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1185
Number of HSP's gapped (non-prelim): 18
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.