Search of human proteins with 32484985

Search of human proteins with 32484985

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|32484985 globoside
alpha-1,3-N-acetylgalactosaminyltransferase 1 [Homo sapiens]
         (347 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32484985 globoside alpha-1,3-N-acetylgalactosaminyltransferas...   728   0.0  
gi|58331216 ABO blood group (alpha 1-3-N-acetylgalactosaminyltra...   292   3e-79
gi|122937275 alpha 1,3-galactosyltransferase 2 [Homo sapiens]         212   3e-55
gi|134288859 glycosyltransferase 6 domain containing 1 [Homo sap...   170   2e-42
gi|197116361 inositol polyphosphate-4-phosphatase, type 1 isofor...    30   3.2  
gi|197116359 inositol polyphosphate-4-phosphatase, type 1 isofor...    30   3.2  
gi|4504705 inositol polyphosphate-4-phosphatase, type 1 isoform ...    30   3.2  
gi|4755140 inositol polyphosphate-4-phosphatase, type 1 isoform ...    30   3.2  
gi|119703755 laminin, beta 2 precursor [Homo sapiens]                  30   4.2  
gi|187608767 E74-like factor 4 [Homo sapiens]                          29   7.1  
gi|4503555 E74-like factor 4 [Homo sapiens]                            29   7.1  
gi|167614504 laminin, beta 1 precursor [Homo sapiens]                  28   9.3  

>gi|32484985 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
           [Homo sapiens]
          Length = 347

 Score =  728 bits (1878), Expect = 0.0
 Identities = 347/347 (100%), Positives = 347/347 (100%)

Query: 1   MHRRRLALGLGFCLLAGTSLSVLWVYLENWLPVSYVPYYLPCPEIFNMKLHYKREKPLQP 60
           MHRRRLALGLGFCLLAGTSLSVLWVYLENWLPVSYVPYYLPCPEIFNMKLHYKREKPLQP
Sbjct: 1   MHRRRLALGLGFCLLAGTSLSVLWVYLENWLPVSYVPYYLPCPEIFNMKLHYKREKPLQP 60

Query: 61  VVWSQYPQPKLLEHRPTQLLTLTPWLAPIVSEGTFNPELLQHIYQPLNLTIGVTVFAVGK 120
           VVWSQYPQPKLLEHRPTQLLTLTPWLAPIVSEGTFNPELLQHIYQPLNLTIGVTVFAVGK
Sbjct: 61  VVWSQYPQPKLLEHRPTQLLTLTPWLAPIVSEGTFNPELLQHIYQPLNLTIGVTVFAVGK 120

Query: 121 YTHFIQSFLESAEEFFMRGYRVHYYIFTDNPAAVPGVPLGPHRLLSSIPIQGHSHWEETS 180
           YTHFIQSFLESAEEFFMRGYRVHYYIFTDNPAAVPGVPLGPHRLLSSIPIQGHSHWEETS
Sbjct: 121 YTHFIQSFLESAEEFFMRGYRVHYYIFTDNPAAVPGVPLGPHRLLSSIPIQGHSHWEETS 180

Query: 181 MRRMETISQHIAKRAHREVDYLFCLDVDMVFRNPWGPETLGDLVAAIHPSYYAVPRQQFP 240
           MRRMETISQHIAKRAHREVDYLFCLDVDMVFRNPWGPETLGDLVAAIHPSYYAVPRQQFP
Sbjct: 181 MRRMETISQHIAKRAHREVDYLFCLDVDMVFRNPWGPETLGDLVAAIHPSYYAVPRQQFP 240

Query: 241 YERRRVSTAFVADSEGDFYYGGAVFGGQVARVYEFTRGCHMAILADKANGIMAAWREESH 300
           YERRRVSTAFVADSEGDFYYGGAVFGGQVARVYEFTRGCHMAILADKANGIMAAWREESH
Sbjct: 241 YERRRVSTAFVADSEGDFYYGGAVFGGQVARVYEFTRGCHMAILADKANGIMAAWREESH 300

Query: 301 LNRHFISNKPSKVLSPEYLWDDRKPQPPSLKLIRFSTLDKDISCLRS 347
           LNRHFISNKPSKVLSPEYLWDDRKPQPPSLKLIRFSTLDKDISCLRS
Sbjct: 301 LNRHFISNKPSKVLSPEYLWDDRKPQPPSLKLIRFSTLDKDISCLRS 347


>gi|58331216 ABO blood group (alpha
           1-3-N-acetylgalactosaminyltransferase, alpha
           1-3-galactosyltransferase) [Homo sapiens]
          Length = 354

 Score =  292 bits (747), Expect = 3e-79
 Identities = 143/283 (50%), Positives = 189/283 (66%), Gaps = 1/283 (0%)

Query: 66  YPQPKLLEHRPTQLLTLTPWLAPIVSEGTFNPELLQHIYQPLNLTIGVTVFAVGKYTHFI 125
           YPQPK+L      +L +TPWLAPIV EGTFN ++L   ++  N TIG+TVFA+ KY  F+
Sbjct: 71  YPQPKVLTPCRKDVLVVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLTVFAIKKYVAFL 130

Query: 126 QSFLESAEEFFMRGYRVHYYIFTDNPAAVPGVPLGPHRLLSSIPIQGHSHWEETSMRRME 185
           + FLE+AE+ FM G+RVHYY+FTD PAAVP V LG  R LS + ++ +  W++ SMRRME
Sbjct: 131 KLFLETAEKHFMVGHRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVRAYKRWQDVSMRRME 190

Query: 186 TISQHIAKRAHREVDYLFCLDVDMVFRNPWGPETLGDLVAAIHPSYYAVPRQQFPYERRR 245
            IS    +R   EVDYL C+DVDM FR+  G E L  L   +HP +Y   R+ F YERR 
Sbjct: 191 MISDFCERRFLSEVDYLVCVDVDMEFRDHVGVEILTPLFGTLHPGFYGSSREAFTYERRP 250

Query: 246 VSTAFVADSEGDFYYGGAVFGGQVARVYEFTRGCHMAILADKANGIMAAWREESHLNRHF 305
            S A++   EGDFYY G  FGG V  V   TR CH A++ D+ANGI A W +ESHLN++ 
Sbjct: 251 QSQAYIPKDEGDFYYLGGFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYL 310

Query: 306 ISNKPSKVLSPEYLWDDR-KPQPPSLKLIRFSTLDKDISCLRS 347
           + +KP+KVLSPEYLWD +    P  L+ +RF+ + K+   +R+
Sbjct: 311 LRHKPTKVLSPEYLWDQQLLGWPAVLRKLRFTAVPKNHQAVRN 353


>gi|122937275 alpha 1,3-galactosyltransferase 2 [Homo sapiens]
          Length = 340

 Score =  212 bits (540), Expect = 3e-55
 Identities = 107/244 (43%), Positives = 151/244 (61%), Gaps = 1/244 (0%)

Query: 78  QLLTLTPWLAPIVSEGTFNPELLQHIYQPLNLTIGVTVFAVGKYTH-FIQSFLESAEEFF 136
           ++LT TPW API+ +G+F+P++ +   +  NLTIG+T+FAVG+Y   +++ FLE+AE+ F
Sbjct: 70  EVLTCTPWGAPIIWDGSFDPDVAKQEARQQNLTIGLTIFAVGRYLEKYLERFLETAEQHF 129

Query: 137 MRGYRVHYYIFTDNPAAVPGVPLGPHRLLSSIPIQGHSHWEETSMRRMETISQHIAKRAH 196
           M G  V YY+FT+ P AVP V LGP R L    +     W++ SM RM T+   +     
Sbjct: 130 MAGQSVMYYVFTELPGAVPRVALGPGRRLPVERVARERRWQDVSMARMRTLHAALGGLPG 189

Query: 197 REVDYLFCLDVDMVFRNPWGPETLGDLVAAIHPSYYAVPRQQFPYERRRVSTAFVADSEG 256
           RE  ++FC+DVD  F   +GPE L + VA +H  +Y  P    P+ER   S A +A  +G
Sbjct: 190 REAHFMFCMDVDQHFSGTFGPEALAESVAQLHSWHYHWPSWLLPFERDAHSAAAMAWGQG 249

Query: 257 DFYYGGAVFGGQVARVYEFTRGCHMAILADKANGIMAAWREESHLNRHFISNKPSKVLSP 316
           DFY   AVFGG VA +   T  C   +  D+A G+ A W +ESHLN+ F  +KP+KVLSP
Sbjct: 250 DFYNHAAVFGGSVAALRGLTAHCAGGLDWDRARGLEARWHDESHLNKFFWLHKPAKVLSP 309

Query: 317 EYLW 320
           E+ W
Sbjct: 310 EFCW 313


>gi|134288859 glycosyltransferase 6 domain containing 1 [Homo
           sapiens]
          Length = 276

 Score =  170 bits (430), Expect = 2e-42
 Identities = 91/261 (34%), Positives = 147/261 (56%), Gaps = 7/261 (2%)

Query: 52  YKREKPLQPVVWSQYPQPKLLEHRPTQLLTLTPWLAPIVSEGTFNPELLQHIYQPLNLTI 111
           Y R   ++ +  S +  P+    RP  ++T T WLAP++ EGTF+  +L+  Y+  N+T+
Sbjct: 22  YFRNHQVEELRLSDWFHPR---KRP-DVITKTDWLAPVLWEGTFDRRVLEKHYRRRNITV 77

Query: 112 GVTVFAVGKYTH-FIQSFLESAEEFFMRGYRVHYYIFTDNPAAVPGVPLGPHRLLSSIPI 170
           G+ VFA G++   +++ FL SA + FM GYRV +YI  D    +P +   P R   +  +
Sbjct: 78  GLAVFATGRFAEEYLRPFLHSANKHFMTGYRVIFYIMVDAFFKLPDIEPSPLRTFKAFKV 137

Query: 171 QGHSHWEETSMRRMETISQHIAKRAHREVDYLFCLDVDMVFRNPWGPETLGDLVAAIHPS 230
                W +  +  ++++ +HIA     EVD+LF +  + VF+N +G ETLG LVA +H  
Sbjct: 138 GTERWWLDGPLVHVKSLGEHIASHIQDEVDFLFSMAANQVFQNEFGVETLGPLVAQLHAW 197

Query: 231 YYAVPRQQFPYERRRVSTAFVADSEGDFYYGGAVFGGQVARVYEFTRGCHMAILADKANG 290
           +Y    + FPYERR  S A +   +GDFYYG  + GG    + +F +     ++ D  NG
Sbjct: 198 WYFRNTKNFPYERRPTSAACIPFGQGDFYYGNLMVGGTPHNILDFIKEYLNGVIHDIKNG 257

Query: 291 IMAAWREESHLNRHFISNKPS 311
           + + +  E HLN++F  NKP+
Sbjct: 258 LNSTY--EKHLNKYFYLNKPT 276


>gi|197116361 inositol polyphosphate-4-phosphatase, type 1 isoform c
           [Homo sapiens]
          Length = 972

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 7/46 (15%)

Query: 263 AVFGGQVARVYEF--TRGCHMAILADKANGIMAAWREESHLNRHFI 306
           +VFGG + R+Y F  T G H+ IL   A  +++      H+ R F+
Sbjct: 223 SVFGGAICRMYRFPTTDGNHLRILEQMAESVLSL-----HVPRQFV 263


>gi|197116359 inositol polyphosphate-4-phosphatase, type 1 isoform d
           [Homo sapiens]
          Length = 977

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 7/46 (15%)

Query: 263 AVFGGQVARVYEF--TRGCHMAILADKANGIMAAWREESHLNRHFI 306
           +VFGG + R+Y F  T G H+ IL   A  +++      H+ R F+
Sbjct: 223 SVFGGAICRMYRFPTTDGNHLRILEQMAESVLSL-----HVPRQFV 263


>gi|4504705 inositol polyphosphate-4-phosphatase, type 1 isoform b
           [Homo sapiens]
          Length = 954

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 7/46 (15%)

Query: 263 AVFGGQVARVYEF--TRGCHMAILADKANGIMAAWREESHLNRHFI 306
           +VFGG + R+Y F  T G H+ IL   A  +++      H+ R F+
Sbjct: 223 SVFGGAICRMYRFPTTDGNHLRILEQMAESVLSL-----HVPRQFV 263


>gi|4755140 inositol polyphosphate-4-phosphatase, type 1 isoform a
           [Homo sapiens]
          Length = 938

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 7/46 (15%)

Query: 263 AVFGGQVARVYEF--TRGCHMAILADKANGIMAAWREESHLNRHFI 306
           +VFGG + R+Y F  T G H+ IL   A  +++      H+ R F+
Sbjct: 223 SVFGGAICRMYRFPTTDGNHLRILEQMAESVLSL-----HVPRQFV 263


>gi|119703755 laminin, beta 2 precursor [Homo sapiens]
          Length = 1798

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 19/78 (24%)

Query: 109 LTIGVTVFAVGKYTHFIQSF--------LESAEEFFMRGYRVHYYIFTDNPAAVPGVPLG 160
           +TI + + A   +TH I +F        L      F R + V+ Y   D  A  PGVPL 
Sbjct: 133 VTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWHVYRYFSYDCGADFPGVPLA 192

Query: 161 PHRLLSSIPIQGHSHWEE 178
           P R           HW++
Sbjct: 193 PPR-----------HWDD 199


>gi|187608767 E74-like factor 4 [Homo sapiens]
          Length = 663

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 82  LTPWLAPIVSEGTFNPELL--QHIYQPLNLTIGVTVFAVGKYTHFIQSFLESAEEFFMRG 139
           L P    +VS G+ NP LL  Q +  P   T+G+T  A  + +    S L +       G
Sbjct: 576 LQPLPTQVVSRGSHNPSLLGNQTLSPPSRPTVGLTPVAELELSSGSGSLLMAEPSVTTSG 635

Query: 140 YRVHYYIFTDNPAAVPGVPLGPHRLLSSIP 169
                 + T +P   P  P  P  L+   P
Sbjct: 636 -----SLLTRSPTPAPFSPFNPTSLIKMEP 660


>gi|4503555 E74-like factor 4 [Homo sapiens]
          Length = 663

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 82  LTPWLAPIVSEGTFNPELL--QHIYQPLNLTIGVTVFAVGKYTHFIQSFLESAEEFFMRG 139
           L P    +VS G+ NP LL  Q +  P   T+G+T  A  + +    S L +       G
Sbjct: 576 LQPLPTQVVSRGSHNPSLLGNQTLSPPSRPTVGLTPVAELELSSGSGSLLMAEPSVTTSG 635

Query: 140 YRVHYYIFTDNPAAVPGVPLGPHRLLSSIP 169
                 + T +P   P  P  P  L+   P
Sbjct: 636 -----SLLTRSPTPAPFSPFNPTSLIKMEP 660


>gi|167614504 laminin, beta 1 precursor [Homo sapiens]
          Length = 1786

 Score = 28.5 bits (62), Expect = 9.3
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 12/87 (13%)

Query: 94  TFNPELLQHIYQPLN----LTIGVTVFAVGKYTHFIQSF--------LESAEEFFMRGYR 141
           TF P  L+  +Q  N    +TI + + A   +TH I +F        L      F + + 
Sbjct: 102 TFAPNRLKIWWQSENGVENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWG 161

Query: 142 VHYYIFTDNPAAVPGVPLGPHRLLSSI 168
           V+ Y   D  A+ PG+  GP + +  I
Sbjct: 162 VYRYFAYDCEASFPGISTGPMKKVDDI 188


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.140    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,746,335
Number of Sequences: 37866
Number of extensions: 697475
Number of successful extensions: 1851
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1844
Number of HSP's gapped (non-prelim): 12
length of query: 347
length of database: 18,247,518
effective HSP length: 103
effective length of query: 244
effective length of database: 14,347,320
effective search space: 3500746080
effective search space used: 3500746080
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.