Guide to the Human Genome
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Search of human proteins with 31542313

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31542313 C-type lectin domain family 4, member D [Homo
sapiens]
         (215 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31542313 C-type lectin domain family 4, member D [Homo sapiens]    465   e-131
gi|18466806 C-type lectin domain family 4, member C isoform 1 [H...   178   3e-45
gi|55742774 dectin-2 [Homo sapiens]                                   172   2e-43
gi|45580692 C-type lectin domain family 4, member C isoform 2 [H...   157   8e-39
gi|7705338 C-type lectin domain family 4, member A isoform 1 [Ho...   155   3e-38
gi|148536836 C-type lectin domain family 4, member A isoform 3 [...   147   7e-36
gi|37577117 C-type lectin domain family 4, member A isoform 4 [H...   142   3e-34
gi|7657333 C-type lectin domain family 4, member E [Homo sapiens]     142   3e-34
gi|37577119 C-type lectin domain family 4, member A isoform 2 [H...   140   8e-34
gi|223278342 C-type lectin domain family 4, member M isoform 11 ...   100   9e-22
gi|223278339 C-type lectin domain family 4, member M isoform 7 [...   100   2e-21
gi|223029384 CD209 molecule isoform 7 [Homo sapiens]                   99   3e-21
gi|223029380 CD209 molecule isoform 5 [Homo sapiens]                   99   3e-21
gi|223278347 C-type lectin domain family 4, member M isoform 9 [...    99   4e-21
gi|223278337 C-type lectin domain family 4, member M isoform 12 ...    99   4e-21
gi|223278335 C-type lectin domain family 4, member M isoform 2 [...    99   4e-21
gi|223029386 CD209 molecule isoform 3 [Homo sapiens]                   99   4e-21
gi|223029382 CD209 molecule isoform 6 [Homo sapiens]                   99   4e-21
gi|10863957 CD209 molecule isoform 1 [Homo sapiens]                    99   4e-21
gi|223278350 C-type lectin domain family 4, member M isoform 8 [...    99   4e-21
gi|42542390 C-type lectin domain family 4, member M isoform 1 [H...    99   4e-21
gi|223029517 CD209 molecule isoform 8 [Homo sapiens]                   97   1e-20
gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]               96   3e-20
gi|126090892 aggrecan isoform 2 precursor [Homo sapiens]               94   7e-20
gi|38372935 brevican isoform 1 [Homo sapiens]                          94   1e-19
gi|223029388 CD209 molecule isoform 4 [Homo sapiens]                   91   1e-18
gi|187607300 versican isoform 2 [Homo sapiens]                         87   8e-18
gi|21361116 versican isoform 1 [Homo sapiens]                          87   8e-18
gi|18426877 asialoglycoprotein receptor 2 isoform c [Homo sapiens]     87   8e-18
gi|18426875 asialoglycoprotein receptor 2 isoform b [Homo sapiens]     87   8e-18

>gi|31542313 C-type lectin domain family 4, member D [Homo sapiens]
          Length = 215

 Score =  465 bits (1196), Expect = e-131
 Identities = 215/215 (100%), Positives = 215/215 (100%)

Query: 1   MGLEKPQSKLEGGMHPQLIPSVIAVVFILLLSVCFIASCLVTHHNFSRCKRGTGVHKLEH 60
           MGLEKPQSKLEGGMHPQLIPSVIAVVFILLLSVCFIASCLVTHHNFSRCKRGTGVHKLEH
Sbjct: 1   MGLEKPQSKLEGGMHPQLIPSVIAVVFILLLSVCFIASCLVTHHNFSRCKRGTGVHKLEH 60

Query: 61  HAKLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLM 120
           HAKLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLM
Sbjct: 61  HAKLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLM 120

Query: 121 TISTEAEQNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGE 180
           TISTEAEQNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGE
Sbjct: 121 TISTEAEQNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGE 180

Query: 181 NCVVLVYNQDKWAWNDVPCNFEASRICKIPGTTLN 215
           NCVVLVYNQDKWAWNDVPCNFEASRICKIPGTTLN
Sbjct: 181 NCVVLVYNQDKWAWNDVPCNFEASRICKIPGTTLN 215


>gi|18466806 C-type lectin domain family 4, member C isoform 1 [Homo
           sapiens]
          Length = 213

 Score =  178 bits (452), Expect = 3e-45
 Identities = 89/210 (42%), Positives = 124/210 (59%), Gaps = 10/210 (4%)

Query: 4   EKPQSKLEGGMHPQLIPSVIAVVFILLLSVCFIASCLVTHHNFSRCKRGTGVHKL----E 59
           E+PQ + +G    QL    +AVV ILLLSVCF  S +V H NF   K    + KL    +
Sbjct: 5   EEPQDREKGLWWFQLKVWSMAVVSILLLSVCFTVSSVVPH-NFMYSKTVKRLSKLREYQQ 63

Query: 60  HHAKLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHL 119
           +H  L C+ E  +++      W+CCP  W +FQS+CYF  T  ++W +S++NCS MGA L
Sbjct: 64  YHPSLTCVMEGKDIED-----WSCCPTPWTSFQSSCYFISTGMQSWTKSQKNCSVMGADL 118

Query: 120 MTISTEAEQNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQG 179
           + I+T  EQ+FIIQ L R  SYFLGL D   +  W+WVDQTP+N    FWH  EP+N   
Sbjct: 119 VVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTPYNENVTFWHSGEPNNLDE 178

Query: 180 ENCVVLVYNQDKWAWNDVPCNFEASRICKI 209
              ++   + ++W WND+ C+     ICK+
Sbjct: 179 RCAIINFRSSEEWGWNDIHCHVPQKSICKM 208


>gi|55742774 dectin-2 [Homo sapiens]
          Length = 209

 Score =  172 bits (436), Expect = 2e-43
 Identities = 83/207 (40%), Positives = 125/207 (60%), Gaps = 8/207 (3%)

Query: 4   EKPQSKLEGGMHPQLIPSVIAVVFILLLSVCFIASCLVTHHNFSRCKRGTGVHKLE-HHA 62
           ++PQS  + G     + SV A + I LLS CFI SC+VT+H F+  + G  + +L  +H+
Sbjct: 5   QQPQSTEKRGWLSLRLWSV-AGISIALLSACFIVSCVVTYH-FTYGETGKRLSELHSYHS 62

Query: 63  KLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTI 122
            L C  E +++ +     W CCP  W++F S+CYF  ++ K W++SE+NC  MGAHL+  
Sbjct: 63  SLTCFSEGTKVPA-----WGCCPASWKSFGSSCYFISSEEKVWSKSEQNCVEMGAHLVVF 117

Query: 123 STEAEQNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGENC 182
           +TEAEQNFI+Q L+   SYFLGL D      W+W+D+TP+     FWH  EP++S  +  
Sbjct: 118 NTEAEQNFIVQQLNESFSYFLGLSDPQGNNNWQWIDKTPYEKNVRFWHLGEPNHSAEQCA 177

Query: 183 VVLVYNQDKWAWNDVPCNFEASRICKI 209
            ++ +    W WNDV C    + IC++
Sbjct: 178 SIVFWKPTGWGWNDVICETRRNSICEM 204


>gi|45580692 C-type lectin domain family 4, member C isoform 2 [Homo
           sapiens]
          Length = 182

 Score =  157 bits (396), Expect = 8e-39
 Identities = 70/170 (41%), Positives = 100/170 (58%), Gaps = 9/170 (5%)

Query: 44  HNFSRCKRGTGVHKL----EHHAKLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPL 99
           HNF   K    + KL    ++H  L C+ E  +++      W+CCP  W +FQS+CYF  
Sbjct: 13  HNFMYSKTVKRLSKLREYQQYHPSLTCVMEGKDIED-----WSCCPTPWTSFQSSCYFIS 67

Query: 100 TDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQ 159
           T  ++W +S++NCS MGA L+ I+T  EQ+FIIQ L R  SYFLGL D   +  W+WVDQ
Sbjct: 68  TGMQSWTKSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQ 127

Query: 160 TPFNPRRVFWHKNEPDNSQGENCVVLVYNQDKWAWNDVPCNFEASRICKI 209
           TP+N    FWH  EP+N      ++   + ++W WND+ C+     ICK+
Sbjct: 128 TPYNENVTFWHSGEPNNLDERCAIINFRSSEEWGWNDIHCHVPQKSICKM 177


>gi|7705338 C-type lectin domain family 4, member A isoform 1 [Homo
           sapiens]
          Length = 237

 Score =  155 bits (391), Expect = 3e-38
 Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 7/187 (3%)

Query: 25  VVFILLLSVCFIASCLVTHHNFSRCKRGTGVHKLEHHAKLKCIKEKSELKSAEGSTWNCC 84
           ++F LLL++ F  + ++    +S+        +L H   L+C+K+   +   E + W+CC
Sbjct: 51  LIFFLLLAISFFIAFVIFFQKYSQLLEKKTTKELVH-TTLECVKKNMPV---EETAWSCC 106

Query: 85  PIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLSYFLG 144
           P +W++F SNCYF  T++ +W +SE++C+ M AHL+ I+T+ EQ+FI Q L    +YF+G
Sbjct: 107 PKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVG 166

Query: 145 LRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGENCVVLVYNQD--KWAWNDVPCNFE 202
           L D   +  W+WVDQTP+N    FWH  EP +   E CVVL + +   +W WNDV C   
Sbjct: 167 LSDPEGQRHWQWVDQTPYNESSTFWHPREP-SDPNERCVVLNFRKSPKRWGWNDVNCLGP 225

Query: 203 ASRICKI 209
              +C++
Sbjct: 226 QRSVCEM 232


>gi|148536836 C-type lectin domain family 4, member A isoform 3
           [Homo sapiens]
          Length = 198

 Score =  147 bits (371), Expect = 7e-36
 Identities = 63/151 (41%), Positives = 95/151 (62%), Gaps = 6/151 (3%)

Query: 61  HAKLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLM 120
           H  L+C+K+   +   E + W+CCP +W++F SNCYF  T++ +W +SE++C+ M AHL+
Sbjct: 47  HTTLECVKKNMPV---EETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLL 103

Query: 121 TISTEAEQNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGE 180
            I+T+ EQ+FI Q L    +YF+GL D   +  W+WVDQTP+N    FWH  EP +   E
Sbjct: 104 VINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREP-SDPNE 162

Query: 181 NCVVLVYNQD--KWAWNDVPCNFEASRICKI 209
            CVVL + +   +W WNDV C      +C++
Sbjct: 163 RCVVLNFRKSPKRWGWNDVNCLGPQRSVCEM 193


>gi|37577117 C-type lectin domain family 4, member A isoform 4 [Homo
           sapiens]
          Length = 165

 Score =  142 bits (357), Expect = 3e-34
 Identities = 63/152 (41%), Positives = 95/152 (62%), Gaps = 10/152 (6%)

Query: 67  IKEKSELKSAEGST-------WNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHL 119
           ++ K+E KS+  +T       W+CCP +W++F SNCYF  T++ +W +SE++C+ M AHL
Sbjct: 10  VRFKNEFKSSGINTASSAETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHL 69

Query: 120 MTISTEAEQNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQG 179
           + I+T+ EQ+FI Q L    +YF+GL D   +  W+WVDQTP+N    FWH  EP +   
Sbjct: 70  LVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREP-SDPN 128

Query: 180 ENCVVLVYNQD--KWAWNDVPCNFEASRICKI 209
           E CVVL + +   +W WNDV C      +C++
Sbjct: 129 ERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEM 160


>gi|7657333 C-type lectin domain family 4, member E [Homo sapiens]
          Length = 219

 Score =  142 bits (357), Expect = 3e-34
 Identities = 77/202 (38%), Positives = 108/202 (53%), Gaps = 9/202 (4%)

Query: 12  GGMHPQLIPSVIAVVFILLLSVCFIASCLVTHHNFSRCKRGTGVHKLEHHAKLKCIKEKS 71
           G    Q+    +A + IL LS CFI  C+VT   F  C         E+  +L C    S
Sbjct: 15  GCFSSQMFLWTVAGIPILFLSACFITRCVVTFRIFQTCDEKK-FQLPENFTELSCYNYGS 73

Query: 72  ELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFI 131
                 GS  NCCP++W  FQS+CYF  TD  +WA S +NCS MGAHL+ I+++ EQ F+
Sbjct: 74  ------GSVKNCCPLNWEYFQSSCYFFSTDTISWALSLKNCSAMGAHLVVINSQEEQEFL 127

Query: 132 IQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDN-SQGENCVVLVYNQD 190
                +   +F+GL D+  +GQW+WVD TP      FW   EP+N +  E+C  +  + +
Sbjct: 128 SYKKPKMREFFIGLSDQVVEGQWQWVDGTPLTKSLSFWDVGEPNNIATLEDCATMRDSSN 187

Query: 191 -KWAWNDVPCNFEASRICKIPG 211
            +  WNDV C     RIC++ G
Sbjct: 188 PRQNWNDVTCFLNYFRICEMVG 209


>gi|37577119 C-type lectin domain family 4, member A isoform 2 [Homo
           sapiens]
          Length = 204

 Score =  140 bits (353), Expect = 8e-34
 Identities = 58/133 (43%), Positives = 86/133 (64%), Gaps = 3/133 (2%)

Query: 79  STWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRR 138
           + W+CCP +W++F SNCYF  T++ +W +SE++C+ M AHL+ I+T+ EQ+FI Q L   
Sbjct: 68  TAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEE 127

Query: 139 LSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGENCVVLVYNQD--KWAWND 196
            +YF+GL D   +  W+WVDQTP+N    FWH  EP +   E CVVL + +   +W WND
Sbjct: 128 SAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREP-SDPNERCVVLNFRKSPKRWGWND 186

Query: 197 VPCNFEASRICKI 209
           V C      +C++
Sbjct: 187 VNCLGPQRSVCEM 199


>gi|223278342 C-type lectin domain family 4, member M isoform 11
           [Homo sapiens]
          Length = 332

 Score =  100 bits (249), Expect = 9e-22
 Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 9/160 (5%)

Query: 55  VHKLEHHAKLKCI-KEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCS 113
           V +L   +KL+ I +E ++LK+A       CP DW  FQ NCYF     + W +S   C 
Sbjct: 171 VGELPEKSKLQEIYQELTQLKAAVERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQ 230

Query: 114 GMGAHLMTISTEAEQNFIIQFLDRRLSYF--LGLRDENAKGQWRWVDQTPFNPR-RVFWH 170
            + A L+ I T  EQNF +Q    R + F  +GL D N +G W+WVD +P +P  + +W+
Sbjct: 231 EVRAQLVVIKTAEEQNF-LQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWN 289

Query: 171 KNEPDNSQGENCVVLVYNQDKWAWNDVPCNFEASRICKIP 210
             EP+NS  E+C     +     WND  C+ +   ICK P
Sbjct: 290 SGEPNNSGNEDCAEFSGS----GWNDNRCDVDNYWICKKP 325


>gi|223278339 C-type lectin domain family 4, member M isoform 7
           [Homo sapiens]
          Length = 263

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 59/160 (36%), Positives = 84/160 (52%), Gaps = 9/160 (5%)

Query: 55  VHKLEHHAKLKCI-KEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCS 113
           V +L   +KL+ I +E + LK+A       CP DW  FQ NCYF     + W +S   C 
Sbjct: 102 VGELPEKSKLQEIYQELTRLKAAVERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQ 161

Query: 114 GMGAHLMTISTEAEQNFIIQFLDRRLSYF--LGLRDENAKGQWRWVDQTPFNPR-RVFWH 170
            + A L+ I T  EQNF +Q    R + F  +GL D N +G W+WVD +P +P  + +W+
Sbjct: 162 EVRAQLVVIKTAEEQNF-LQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWN 220

Query: 171 KNEPDNSQGENCVVLVYNQDKWAWNDVPCNFEASRICKIP 210
             EP+NS  E+C     +     WND  C+ +   ICK P
Sbjct: 221 SGEPNNSGNEDCAEFSGS----GWNDNRCDVDNYWICKKP 256


>gi|223029384 CD209 molecule isoform 7 [Homo sapiens]
          Length = 312

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 60/170 (35%), Positives = 87/170 (51%), Gaps = 11/170 (6%)

Query: 43  HHNFSRCKRGTGVHKLEHHAKLKCI-KEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTD 101
           +   +R K   G  +L   +KL+ I +E + LK+A     + CP +W  FQ NCYF    
Sbjct: 124 YQELTRLKAAVG--ELPEKSKLQEIYQELTWLKAAVERLCHPCPWEWTFFQGNCYFMSNS 181

Query: 102 NKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLSYF--LGLRDENAKGQWRWVDQ 159
            + W +S   C  +GA L+ I +  EQNF +Q    R + F  +GL D N +G W+WVD 
Sbjct: 182 QRNWHDSITACKEVGAQLVVIKSAEEQNF-LQLQSSRSNRFTWMGLSDLNQEGTWQWVDG 240

Query: 160 TPFNPR-RVFWHKNEPDNSQGENCVVLVYNQDKWAWNDVPCNFEASRICK 208
           +P  P  + +W++ EP+N   E+C     N     WND  CN     ICK
Sbjct: 241 SPLLPSFKQYWNRGEPNNVGEEDCAEFSGN----GWNDDKCNLAKFWICK 286


>gi|223029380 CD209 molecule isoform 5 [Homo sapiens]
          Length = 268

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 60/170 (35%), Positives = 87/170 (51%), Gaps = 11/170 (6%)

Query: 43  HHNFSRCKRGTGVHKLEHHAKLKCI-KEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTD 101
           +   +R K   G  +L   +KL+ I +E + LK+A     + CP +W  FQ NCYF    
Sbjct: 80  YQELTRLKAAVG--ELPEKSKLQEIYQELTWLKAAVERLCHPCPWEWTFFQGNCYFMSNS 137

Query: 102 NKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLSYF--LGLRDENAKGQWRWVDQ 159
            + W +S   C  +GA L+ I +  EQNF +Q    R + F  +GL D N +G W+WVD 
Sbjct: 138 QRNWHDSITACKEVGAQLVVIKSAEEQNF-LQLQSSRSNRFTWMGLSDLNQEGTWQWVDG 196

Query: 160 TPFNPR-RVFWHKNEPDNSQGENCVVLVYNQDKWAWNDVPCNFEASRICK 208
           +P  P  + +W++ EP+N   E+C     N     WND  CN     ICK
Sbjct: 197 SPLLPSFKQYWNRGEPNNVGEEDCAEFSGN----GWNDDKCNLAKFWICK 242


>gi|223278347 C-type lectin domain family 4, member M isoform 9
           [Homo sapiens]
          Length = 353

 Score = 98.6 bits (244), Expect = 4e-21
 Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 8/146 (5%)

Query: 68  KEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAE 127
           +E ++LK+A       CP DW  FQ NCYF     + W +S   C  + A L+ I T  E
Sbjct: 206 QELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEE 265

Query: 128 QNFIIQFLDRRLSYF--LGLRDENAKGQWRWVDQTPFNPR-RVFWHKNEPDNSQGENCVV 184
           QNF +Q    R + F  +GL D N +G W+WVD +P +P  + +W+  EP+NS  E+C  
Sbjct: 266 QNF-LQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAE 324

Query: 185 LVYNQDKWAWNDVPCNFEASRICKIP 210
              +     WND  C+ +   ICK P
Sbjct: 325 FSGS----GWNDNRCDVDNYWICKKP 346


>gi|223278337 C-type lectin domain family 4, member M isoform 12
           [Homo sapiens]
          Length = 375

 Score = 98.6 bits (244), Expect = 4e-21
 Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 8/146 (5%)

Query: 68  KEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAE 127
           +E ++LK+A       CP DW  FQ NCYF     + W +S   C  + A L+ I T  E
Sbjct: 228 QELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEE 287

Query: 128 QNFIIQFLDRRLSYF--LGLRDENAKGQWRWVDQTPFNPR-RVFWHKNEPDNSQGENCVV 184
           QNF +Q    R + F  +GL D N +G W+WVD +P +P  + +W+  EP+NS  E+C  
Sbjct: 288 QNF-LQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAE 346

Query: 185 LVYNQDKWAWNDVPCNFEASRICKIP 210
              +     WND  C+ +   ICK P
Sbjct: 347 FSGS----GWNDNRCDVDNYWICKKP 368


>gi|223278335 C-type lectin domain family 4, member M isoform 2
           [Homo sapiens]
          Length = 348

 Score = 98.6 bits (244), Expect = 4e-21
 Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 8/146 (5%)

Query: 68  KEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAE 127
           +E ++LK+A       CP DW  FQ NCYF     + W +S   C  + A L+ I T  E
Sbjct: 201 QELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEE 260

Query: 128 QNFIIQFLDRRLSYF--LGLRDENAKGQWRWVDQTPFNPR-RVFWHKNEPDNSQGENCVV 184
           QNF +Q    R + F  +GL D N +G W+WVD +P +P  + +W+  EP+NS  E+C  
Sbjct: 261 QNF-LQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAE 319

Query: 185 LVYNQDKWAWNDVPCNFEASRICKIP 210
              +     WND  C+ +   ICK P
Sbjct: 320 FSGS----GWNDNRCDVDNYWICKKP 341


>gi|223029386 CD209 molecule isoform 3 [Homo sapiens]
          Length = 380

 Score = 98.6 bits (244), Expect = 4e-21
 Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 8/144 (5%)

Query: 68  KEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAE 127
           +E ++LK+A     + CP +W  FQ NCYF     + W +S   C  +GA L+ I +  E
Sbjct: 216 QELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEE 275

Query: 128 QNFIIQFLDRRLSYF--LGLRDENAKGQWRWVDQTPFNPR-RVFWHKNEPDNSQGENCVV 184
           QNF +Q    R + F  +GL D N +G W+WVD +P  P  + +W++ EP+N   E+C  
Sbjct: 276 QNF-LQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAE 334

Query: 185 LVYNQDKWAWNDVPCNFEASRICK 208
              N     WND  CN     ICK
Sbjct: 335 FSGN----GWNDDKCNLAKFWICK 354


>gi|223029382 CD209 molecule isoform 6 [Homo sapiens]
          Length = 360

 Score = 98.6 bits (244), Expect = 4e-21
 Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 8/144 (5%)

Query: 68  KEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAE 127
           +E ++LK+A     + CP +W  FQ NCYF     + W +S   C  +GA L+ I +  E
Sbjct: 196 QELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEE 255

Query: 128 QNFIIQFLDRRLSYF--LGLRDENAKGQWRWVDQTPFNPR-RVFWHKNEPDNSQGENCVV 184
           QNF +Q    R + F  +GL D N +G W+WVD +P  P  + +W++ EP+N   E+C  
Sbjct: 256 QNF-LQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAE 314

Query: 185 LVYNQDKWAWNDVPCNFEASRICK 208
              N     WND  CN     ICK
Sbjct: 315 FSGN----GWNDDKCNLAKFWICK 334


>gi|10863957 CD209 molecule isoform 1 [Homo sapiens]
          Length = 404

 Score = 98.6 bits (244), Expect = 4e-21
 Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 8/144 (5%)

Query: 68  KEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAE 127
           +E ++LK+A     + CP +W  FQ NCYF     + W +S   C  +GA L+ I +  E
Sbjct: 240 QELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEE 299

Query: 128 QNFIIQFLDRRLSYF--LGLRDENAKGQWRWVDQTPFNPR-RVFWHKNEPDNSQGENCVV 184
           QNF +Q    R + F  +GL D N +G W+WVD +P  P  + +W++ EP+N   E+C  
Sbjct: 300 QNF-LQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAE 358

Query: 185 LVYNQDKWAWNDVPCNFEASRICK 208
              N     WND  CN     ICK
Sbjct: 359 FSGN----GWNDDKCNLAKFWICK 378


>gi|223278350 C-type lectin domain family 4, member M isoform 8
           [Homo sapiens]
          Length = 376

 Score = 98.6 bits (244), Expect = 4e-21
 Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 8/146 (5%)

Query: 68  KEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAE 127
           +E ++LK+A       CP DW  FQ NCYF     + W +S   C  + A L+ I T  E
Sbjct: 229 QELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEE 288

Query: 128 QNFIIQFLDRRLSYF--LGLRDENAKGQWRWVDQTPFNPR-RVFWHKNEPDNSQGENCVV 184
           QNF +Q    R + F  +GL D N +G W+WVD +P +P  + +W+  EP+NS  E+C  
Sbjct: 289 QNF-LQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAE 347

Query: 185 LVYNQDKWAWNDVPCNFEASRICKIP 210
              +     WND  C+ +   ICK P
Sbjct: 348 FSGS----GWNDNRCDVDNYWICKKP 369


>gi|42542390 C-type lectin domain family 4, member M isoform 1 [Homo
           sapiens]
          Length = 399

 Score = 98.6 bits (244), Expect = 4e-21
 Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 8/146 (5%)

Query: 68  KEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAE 127
           +E ++LK+A       CP DW  FQ NCYF     + W +S   C  + A L+ I T  E
Sbjct: 252 QELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEE 311

Query: 128 QNFIIQFLDRRLSYF--LGLRDENAKGQWRWVDQTPFNPR-RVFWHKNEPDNSQGENCVV 184
           QNF +Q    R + F  +GL D N +G W+WVD +P +P  + +W+  EP+NS  E+C  
Sbjct: 312 QNF-LQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAE 370

Query: 185 LVYNQDKWAWNDVPCNFEASRICKIP 210
              +     WND  C+ +   ICK P
Sbjct: 371 FSGS----GWNDNRCDVDNYWICKKP 392


>gi|223029517 CD209 molecule isoform 8 [Homo sapiens]
          Length = 243

 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 8/141 (5%)

Query: 71  SELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNF 130
           ++LK+A     + CP +W  FQ NCYF     + W +S   C  +GA L+ I +  EQNF
Sbjct: 82  TQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNF 141

Query: 131 IIQFLDRRLSYF--LGLRDENAKGQWRWVDQTPFNPR-RVFWHKNEPDNSQGENCVVLVY 187
            +Q    R + F  +GL D N +G W+WVD +P  P  + +W++ EP+N   E+C     
Sbjct: 142 -LQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSG 200

Query: 188 NQDKWAWNDVPCNFEASRICK 208
           N     WND  CN     ICK
Sbjct: 201 N----GWNDDKCNLAKFWICK 217


>gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]
          Length = 2317

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 10/143 (6%)

Query: 68   KEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAE 127
            K +SE  +A+      C   W  +Q +CY    D +TW ++ER C    +HL +I T  E
Sbjct: 2155 KRESESTAADQEV---CEEGWNKYQGHCYRHFPDRETWVDAERRCREQQSHLSSIVTPEE 2211

Query: 128  QNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDN--SQGENCVVL 185
            Q F+    + +   ++GL D   +G +RW D  P       W  N+PDN  + GE+CVV+
Sbjct: 2212 QEFVNN--NAQDYQWIGLNDRTIEGDFRWSDGHPMQFEN--WRPNQPDNFFAAGEDCVVM 2267

Query: 186  VYNQDKWAWNDVPCNFEASRICK 208
            +++ +K  WNDVPCN+     CK
Sbjct: 2268 IWH-EKGEWNDVPCNYHLPFTCK 2289


>gi|126090892 aggrecan isoform 2 precursor [Homo sapiens]
          Length = 2416

 Score = 94.4 bits (233), Expect = 7e-20
 Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 7/127 (5%)

Query: 84   CPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLSYFL 143
            C   W  +Q +CY    D +TW ++ER C    +HL +I T  EQ F+    + +   ++
Sbjct: 2206 CEEGWNKYQGHCYRHFPDRETWVDAERRCREQQSHLSSIVTPEEQEFVNN--NAQDYQWI 2263

Query: 144  GLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDN--SQGENCVVLVYNQDKWAWNDVPCNF 201
            GL D   +G +RW D  P       W  N+PDN  + GE+CVV++++ +K  WNDVPCN+
Sbjct: 2264 GLNDRTIEGDFRWSDGHPMQFEN--WRPNQPDNFFAAGEDCVVMIWH-EKGEWNDVPCNY 2320

Query: 202  EASRICK 208
                 CK
Sbjct: 2321 HLPFTCK 2327


>gi|38372935 brevican isoform 1 [Homo sapiens]
          Length = 911

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 51/129 (39%), Positives = 72/129 (55%), Gaps = 9/129 (6%)

Query: 84  CPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLSY-F 142
           C   W AFQ  CY   +  ++W E+E  C   GAHL +IST  EQ+FI    +R   Y +
Sbjct: 688 CNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI---NNRYREYQW 744

Query: 143 LGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDN--SQGENCVVLVYNQDKWAWNDVPCN 200
           +GL D   +G + W D  P       W+  +PD+    GENCVV+V++ D+  W+DVPCN
Sbjct: 745 IGLNDRTIEGDFLWSDGVPLLYEN--WNPGQPDSYFLSGENCVVMVWH-DQGQWSDVPCN 801

Query: 201 FEASRICKI 209
           +  S  CK+
Sbjct: 802 YHLSYTCKM 810


>gi|223029388 CD209 molecule isoform 4 [Homo sapiens]
          Length = 398

 Score = 90.5 bits (223), Expect = 1e-18
 Identities = 49/142 (34%), Positives = 73/142 (51%), Gaps = 10/142 (7%)

Query: 68  KEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAE 127
           +E ++LK+A     + CP +W  FQ NCYF     + W +S   C  +GA L+ I +  E
Sbjct: 240 QELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEE 299

Query: 128 QNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPR-RVFWHKNEPDNSQGENCVVLV 186
           Q+        R ++ +GL D N +G W+WVD +P  P  + +W++ EP+N   E+C    
Sbjct: 300 QS----SRSNRFTW-MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFS 354

Query: 187 YNQDKWAWNDVPCNFEASRICK 208
            N     WND  CN     ICK
Sbjct: 355 GN----GWNDDKCNLAKFWICK 372


>gi|187607300 versican isoform 2 [Homo sapiens]
          Length = 655

 Score = 87.4 bits (215), Expect = 8e-18
 Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 13/130 (10%)

Query: 84  CPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLSY-- 141
           C   W  FQ  CY      +TW  +ER C   GAHL +I +  EQ F+      R+ +  
Sbjct: 428 CDYGWHKFQGQCYKYFAHRRTWDAAERECRLQGAHLTSILSHEEQMFV-----NRVGHDY 482

Query: 142 -FLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDN--SQGENCVVLVYNQDKWAWNDVP 198
            ++GL D+  +  +RW D +        W  N+PD+  S GE+CVV++++++   WNDVP
Sbjct: 483 QWIGLNDKMFEHDFRWTDGSTLQYEN--WRPNQPDSFFSAGEDCVVIIWHEN-GQWNDVP 539

Query: 199 CNFEASRICK 208
           CN+  +  CK
Sbjct: 540 CNYHLTYTCK 549


>gi|21361116 versican isoform 1 [Homo sapiens]
          Length = 3396

 Score = 87.4 bits (215), Expect = 8e-18
 Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 13/130 (10%)

Query: 84   CPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLSY-- 141
            C   W  FQ  CY      +TW  +ER C   GAHL +I +  EQ F+      R+ +  
Sbjct: 3169 CDYGWHKFQGQCYKYFAHRRTWDAAERECRLQGAHLTSILSHEEQMFV-----NRVGHDY 3223

Query: 142  -FLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDN--SQGENCVVLVYNQDKWAWNDVP 198
             ++GL D+  +  +RW D +        W  N+PD+  S GE+CVV++++++   WNDVP
Sbjct: 3224 QWIGLNDKMFEHDFRWTDGSTLQYEN--WRPNQPDSFFSAGEDCVVIIWHEN-GQWNDVP 3280

Query: 199  CNFEASRICK 208
            CN+  +  CK
Sbjct: 3281 CNYHLTYTCK 3290


>gi|18426877 asialoglycoprotein receptor 2 isoform c [Homo sapiens]
          Length = 292

 Score = 87.4 bits (215), Expect = 8e-18
 Identities = 49/142 (34%), Positives = 73/142 (51%), Gaps = 12/142 (8%)

Query: 64  LKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTIS 123
           L+ +  + EL  + GS   CCP++W   Q +CY+     K WAE+E+ C    AHL+ I+
Sbjct: 138 LRFVACQMELLHSNGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVIN 197

Query: 124 TEAEQNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQG---- 179
           +  EQ FI+Q  +   + ++GL D +  G W+WVD T +      W   +PDN  G    
Sbjct: 198 SWEEQKFIVQHTN-PFNTWIGLTDSD--GSWKWVDGTDYRHNYKNWAVTQPDNWHGHELG 254

Query: 180 --ENCVVLVYNQDKWAWNDVPC 199
             E+CV +   Q    WND  C
Sbjct: 255 GSEDCVEV---QPDGRWNDDFC 273


>gi|18426875 asialoglycoprotein receptor 2 isoform b [Homo sapiens]
          Length = 287

 Score = 87.4 bits (215), Expect = 8e-18
 Identities = 49/142 (34%), Positives = 73/142 (51%), Gaps = 12/142 (8%)

Query: 64  LKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTIS 123
           L+ +  + EL  + GS   CCP++W   Q +CY+     K WAE+E+ C    AHL+ I+
Sbjct: 133 LRFVACQMELLHSNGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVIN 192

Query: 124 TEAEQNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQG---- 179
           +  EQ FI+Q  +   + ++GL D +  G W+WVD T +      W   +PDN  G    
Sbjct: 193 SWEEQKFIVQHTN-PFNTWIGLTDSD--GSWKWVDGTDYRHNYKNWAVTQPDNWHGHELG 249

Query: 180 --ENCVVLVYNQDKWAWNDVPC 199
             E+CV +   Q    WND  C
Sbjct: 250 GSEDCVEV---QPDGRWNDDFC 268


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.135    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,116,401
Number of Sequences: 37866
Number of extensions: 397950
Number of successful extensions: 1058
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 788
Number of HSP's gapped (non-prelim): 161
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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