Search of human proteins with 30065643

Search of human proteins with 30065643

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|30065643 protein phosphatase 2A, regulatory subunit B'
isoform b [Homo sapiens]
         (323 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|30065643 protein phosphatase 2A, regulatory subunit B' isofor...   667   0.0  
gi|29725611 protein phosphatase 2A, regulatory subunit B' isofor...   667   0.0  
gi|30065645 protein phosphatase 2A, regulatory subunit B' isofor...   650   0.0  
gi|30065649 protein phosphatase 2A, regulatory subunit B' isofor...   560   e-160
gi|29893564 microspherule protein 1 isoform 1 [Homo sapiens]           29   6.5  
gi|59799166 microspherule protein 1 isoform 2 [Homo sapiens]           29   6.5  
gi|6912464 latrophilin 2 precursor [Homo sapiens]                      29   6.5  

>gi|30065643 protein phosphatase 2A, regulatory subunit B' isoform b
           [Homo sapiens]
          Length = 323

 Score =  667 bits (1722), Expect = 0.0
 Identities = 323/323 (100%), Positives = 323/323 (100%)

Query: 1   MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60
           MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK
Sbjct: 1   MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60

Query: 61  GKKLTFEYRVSEAIEKLVALLNTLDRWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLV 120
           GKKLTFEYRVSEAIEKLVALLNTLDRWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLV
Sbjct: 61  GKKLTFEYRVSEAIEKLVALLNTLDRWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLV 120

Query: 121 ATVVPTHLAAAVPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAI 180
           ATVVPTHLAAAVPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAI
Sbjct: 121 ATVVPTHLAAAVPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAI 180

Query: 181 VFKVFNRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVD 240
           VFKVFNRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVD
Sbjct: 181 VFKVFNRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVD 240

Query: 241 EKAVNENHKDYMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECL 300
           EKAVNENHKDYMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECL
Sbjct: 241 EKAVNENHKDYMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECL 300

Query: 301 EKFPVIQHFKFGSLLPIHPVTSG 323
           EKFPVIQHFKFGSLLPIHPVTSG
Sbjct: 301 EKFPVIQHFKFGSLLPIHPVTSG 323


>gi|29725611 protein phosphatase 2A, regulatory subunit B' isoform b
           [Homo sapiens]
          Length = 323

 Score =  667 bits (1722), Expect = 0.0
 Identities = 323/323 (100%), Positives = 323/323 (100%)

Query: 1   MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60
           MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK
Sbjct: 1   MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60

Query: 61  GKKLTFEYRVSEAIEKLVALLNTLDRWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLV 120
           GKKLTFEYRVSEAIEKLVALLNTLDRWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLV
Sbjct: 61  GKKLTFEYRVSEAIEKLVALLNTLDRWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLV 120

Query: 121 ATVVPTHLAAAVPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAI 180
           ATVVPTHLAAAVPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAI
Sbjct: 121 ATVVPTHLAAAVPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAI 180

Query: 181 VFKVFNRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVD 240
           VFKVFNRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVD
Sbjct: 181 VFKVFNRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVD 240

Query: 241 EKAVNENHKDYMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECL 300
           EKAVNENHKDYMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECL
Sbjct: 241 EKAVNENHKDYMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECL 300

Query: 301 EKFPVIQHFKFGSLLPIHPVTSG 323
           EKFPVIQHFKFGSLLPIHPVTSG
Sbjct: 301 EKFPVIQHFKFGSLLPIHPVTSG 323


>gi|30065645 protein phosphatase 2A, regulatory subunit B' isoform a
           [Homo sapiens]
          Length = 358

 Score =  650 bits (1676), Expect = 0.0
 Identities = 323/358 (90%), Positives = 323/358 (90%), Gaps = 35/358 (9%)

Query: 1   MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60
           MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK
Sbjct: 1   MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60

Query: 61  GKKLTFEYRVSE-----------------------------------AIEKLVALLNTLD 85
           GKKLTFEYRVSE                                   AIEKLVALLNTLD
Sbjct: 61  GKKLTFEYRVSEMWNEVHEEKEQAAKQSVSCDECIPLPRAGHCAPSEAIEKLVALLNTLD 120

Query: 86  RWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGN 145
           RWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGN
Sbjct: 121 RWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLVATVVPTHLAAAVPEVAVYLKESVGN 180

Query: 146 STRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAG 205
           STRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAG
Sbjct: 181 STRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAG 240

Query: 206 SQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKT 265
           SQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKT
Sbjct: 241 SQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVDEKAVNENHKDYMFLECILFITEMKT 300

Query: 266 GPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG 323
           GPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG
Sbjct: 301 GPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECLEKFPVIQHFKFGSLLPIHPVTSG 358


>gi|30065649 protein phosphatase 2A, regulatory subunit B' isoform d
           [Homo sapiens]
          Length = 281

 Score =  560 bits (1443), Expect = e-160
 Identities = 281/323 (86%), Positives = 281/323 (86%), Gaps = 42/323 (13%)

Query: 1   MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60
           MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK
Sbjct: 1   MAEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK 60

Query: 61  GKKLTFEYRVSEAIEKLVALLNTLDRWIDETPPVDQPSRFGNKAYRTWYAKLDEEAENLV 120
           GKKLTFEYRVSE                                          EAENLV
Sbjct: 61  GKKLTFEYRVSE------------------------------------------EAENLV 78

Query: 121 ATVVPTHLAAAVPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAI 180
           ATVVPTHLAAAVPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAI
Sbjct: 79  ATVVPTHLAAAVPEVAVYLKESVGNSTRIDYGTGHEAAFAAFLCCLCKIGVLRVDDQIAI 138

Query: 181 VFKVFNRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVD 240
           VFKVFNRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVD
Sbjct: 139 VFKVFNRYLEVMRKLQKTYRMEPAGSQGVWGLDDFQFLPFIWGSSQLIDHPYLEPRHFVD 198

Query: 241 EKAVNENHKDYMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECL 300
           EKAVNENHKDYMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECL
Sbjct: 199 EKAVNENHKDYMFLECILFITEMKTGPFAEHSNQLWNISAVPSWSKVNQGLIRMYKAECL 258

Query: 301 EKFPVIQHFKFGSLLPIHPVTSG 323
           EKFPVIQHFKFGSLLPIHPVTSG
Sbjct: 259 EKFPVIQHFKFGSLLPIHPVTSG 281


>gi|29893564 microspherule protein 1 isoform 1 [Homo sapiens]
          Length = 462

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 4/77 (5%)

Query: 8   PPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK---GKKL 64
           P P S   AP  T+     K+ +    D+G+WK +      I  +L  N+      G K 
Sbjct: 104 PVPPSPAPAPGLTKRVKKSKQPLQVTKDLGRWKPADDLL-LINAVLQTNDLTSVHLGVKF 162

Query: 65  TFEYRVSEAIEKLVALL 81
           +  + + E  E+  ALL
Sbjct: 163 SCRFTLREVQERWYALL 179


>gi|59799166 microspherule protein 1 isoform 2 [Homo sapiens]
          Length = 475

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 4/77 (5%)

Query: 8   PPPDSSEEAPPATQNFIIPKKEIHTVPDMGKWKRSQAYADYIGFILTLNEGVK---GKKL 64
           P P S   AP  T+     K+ +    D+G+WK +      I  +L  N+      G K 
Sbjct: 117 PVPPSPAPAPGLTKRVKKSKQPLQVTKDLGRWKPADDLL-LINAVLQTNDLTSVHLGVKF 175

Query: 65  TFEYRVSEAIEKLVALL 81
           +  + + E  E+  ALL
Sbjct: 176 SCRFTLREVQERWYALL 192


>gi|6912464 latrophilin 2 precursor [Homo sapiens]
          Length = 1403

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 2   AEGERQPPPDSSEEAPPATQNFIIPKKEIHTVPDMG-KWKRSQ 43
           ++G + PP  S+ + PP T  F +P++    +   G KW ++Q
Sbjct: 441 SKGTKPPPAVSTTKIPPITNIFPLPERFCEALDSKGIKWPQTQ 483


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,180,546
Number of Sequences: 37866
Number of extensions: 570291
Number of successful extensions: 1422
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1416
Number of HSP's gapped (non-prelim): 9
length of query: 323
length of database: 18,247,518
effective HSP length: 102
effective length of query: 221
effective length of database: 14,385,186
effective search space: 3179126106
effective search space used: 3179126106
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.