Search of human proteins with 27734795

Search of human proteins with 27734795

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27734795 hypothetical protein LOC285668 [Homo sapiens]
         (130 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27734795 hypothetical protein LOC285668 [Homo sapiens]             271   1e-73
gi|74024919 sulfotransferase family, cytosolic, 6B, member 1 [Ho...    29   0.92 
gi|162287219 prune homolog 2 [Homo sapiens]                            27   4.6  
gi|62243696 stromal antigen 1 [Homo sapiens]                           27   4.6  
gi|212549561 ataxin 1-like [Homo sapiens]                              27   6.0  
gi|239756056 PREDICTED: similar to hCG2038535 [Homo sapiens]           26   7.8  
gi|239750553 PREDICTED: similar to hCG2038535 [Homo sapiens]           26   7.8  
gi|239744850 PREDICTED: hypothetical protein XP_002344130 [Homo ...    26   7.8  
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor...    26   7.8  
gi|33859793 hypothetical protein LOC139212 [Homo sapiens]              26   7.8  

>gi|27734795 hypothetical protein LOC285668 [Homo sapiens]
          Length = 130

 Score =  271 bits (693), Expect = 1e-73
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 1   MLAPLFLCCLRNLFRKLISFQPPQLGRTNMHYSKLPRTAIETEFKQNVGPPPKDLTAEVY 60
           MLAPLFLCCLRNLFRKLISFQPPQLGRTNMHYSKLPRTAIETEFKQNVGPPPKDLTAEVY
Sbjct: 1   MLAPLFLCCLRNLFRKLISFQPPQLGRTNMHYSKLPRTAIETEFKQNVGPPPKDLTAEVY 60

Query: 61  FPSIKSRSHLPAVFYNQYFKHPKCVGEYGPKNGAERQIEERKVLPTTMMFSMLADCVLKS 120
           FPSIKSRSHLPAVFYNQYFKHPKCVGEYGPKNGAERQIEERKVLPTTMMFSMLADCVLKS
Sbjct: 61  FPSIKSRSHLPAVFYNQYFKHPKCVGEYGPKNGAERQIEERKVLPTTMMFSMLADCVLKS 120

Query: 121 TPIPILGVAM 130
           TPIPILGVAM
Sbjct: 121 TPIPILGVAM 130


>gi|74024919 sulfotransferase family, cytosolic, 6B, member 1
          [Homo sapiens]
          Length = 265

 Score = 29.3 bits (64), Expect = 0.92
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 4  PLFLCCLRNLFRKLISFQPPQLGRTNMHYSKLPRTAIETEFK 45
          P+  C     ++++  F  P++  T++HY KLP +  E + K
Sbjct: 55 PVLECGDSEKYQRMKGFPSPRILATHLHYDKLPGSIFENKAK 96


>gi|162287219 prune homolog 2 [Homo sapiens]
          Length = 3088

 Score = 26.9 bits (58), Expect = 4.6
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 3/24 (12%)

Query: 86   GEYGPKNGAERQI---EERKVLPT 106
            G+ GP NGA ++I   EE K +PT
Sbjct: 2498 GDIGPPNGASKEISELEEEKTIPT 2521


>gi|62243696 stromal antigen 1 [Homo sapiens]
          Length = 1258

 Score = 26.9 bits (58), Expect = 4.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 3   APLFLCCLRNLFRKLISFQPPQLGRTNMHYSKLPRTA 39
           A   +  L+ LF +L+  Q P L RT+ H S +   A
Sbjct: 920 AKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIKELA 956


>gi|212549561 ataxin 1-like [Homo sapiens]
          Length = 689

 Score = 26.6 bits (57), Expect = 6.0
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 21  QPPQLGRTNMHYSKLPRTAIE---TEFKQNVGPPPKDLTAEVYFPSIK-SRSHLP 71
           Q P +    +HY++LP T+++   + +      PP  L + +  PS   + SHLP
Sbjct: 118 QHPGIHYPPLHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATSHLP 172


>gi|239756056 PREDICTED: similar to hCG2038535 [Homo sapiens]
          Length = 147

 Score = 26.2 bits (56), Expect = 7.8
 Identities = 11/27 (40%), Positives = 19/27 (70%)

Query: 57  AEVYFPSIKSRSHLPAVFYNQYFKHPK 83
           AE YF SIK  +H P+++  ++F++ K
Sbjct: 94  AESYFHSIKLCTHSPSLWVIRFFRYNK 120


>gi|239750553 PREDICTED: similar to hCG2038535 [Homo sapiens]
          Length = 147

 Score = 26.2 bits (56), Expect = 7.8
 Identities = 11/27 (40%), Positives = 19/27 (70%)

Query: 57  AEVYFPSIKSRSHLPAVFYNQYFKHPK 83
           AE YF SIK  +H P+++  ++F++ K
Sbjct: 94  AESYFHSIKLCTHSPSLWVIRFFRYNK 120


>gi|239744850 PREDICTED: hypothetical protein XP_002344130 [Homo
           sapiens]
          Length = 147

 Score = 26.2 bits (56), Expect = 7.8
 Identities = 11/27 (40%), Positives = 19/27 (70%)

Query: 57  AEVYFPSIKSRSHLPAVFYNQYFKHPK 83
           AE YF SIK  +H P+++  ++F++ K
Sbjct: 94  AESYFHSIKLCTHSPSLWVIRFFRYNK 120


>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
           homolog, Drosophila); translocated to, 3 [Homo sapiens]
          Length = 568

 Score = 26.2 bits (56), Expect = 7.8
 Identities = 16/56 (28%), Positives = 24/56 (42%)

Query: 15  RKLISFQPPQLGRTNMHYSKLPRTAIETEFKQNVGPPPKDLTAEVYFPSIKSRSHL 70
           +K  S +PP      +   K  +++ E  FK     PP  LT       IK +SH+
Sbjct: 278 KKAPSKRPPISDSEELSAKKRKKSSSEALFKSFSSAPPLILTCSADKKQIKDKSHV 333


>gi|33859793 hypothetical protein LOC139212 [Homo sapiens]
          Length = 214

 Score = 26.2 bits (56), Expect = 7.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 85  VGEYGPKNGAERQIEERKVLPTT 107
           +G  GP N    QIEE KV+P T
Sbjct: 58  IGAMGPGNIGPPQIEELKVIPET 80


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.139    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,706,833
Number of Sequences: 37866
Number of extensions: 247895
Number of successful extensions: 323
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 315
Number of HSP's gapped (non-prelim): 10
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.