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Search of human proteins with 239758047
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239758047 PREDICTED: similar to hCG2039165 [Homo sapiens]
(103 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239758047 PREDICTED: similar to hCG2039165 [Homo sapiens] 212 6e-56
gi|189083840 Fc fragment of IgG, low affinity IIIa, receptor (CD... 188 9e-49
gi|189083838 Fc fragment of IgG, low affinity IIIa, receptor (CD... 188 9e-49
gi|50726979 Fc fragment of IgG, low affinity IIIa, receptor (CD1... 188 9e-49
gi|132814489 low affinity immunoglobulin gamma Fc region recepto... 182 4e-47
gi|189083842 Fc fragment of IgG, low affinity IIIa, receptor (CD... 181 8e-47
gi|189083836 Fc fragment of IgG, low affinity IIIa, receptor (CD... 181 8e-47
gi|50511928 Fc fragment of IgG, low affinity IIb, receptor isofo... 96 8e-21
gi|50511926 Fc fragment of IgG, low affinity IIb, receptor isofo... 96 8e-21
gi|50511932 Fc fragment of IgG, low affinity IIb, receptor isofo... 96 8e-21
gi|50511930 Fc fragment of IgG, low affinity IIb, receptor isofo... 96 8e-21
gi|210031822 Fc fragment of IgG, low affinity IIa, receptor isof... 95 1e-20
gi|50511936 Fc fragment of IgG, low affinity IIa, receptor isofo... 95 1e-20
gi|126116592 Fc fragment of IgG, low affinity IIc, receptor [Hom... 93 4e-20
gi|10835133 Fc fragment of IgG, high affinity Ia, receptor (CD64... 92 7e-20
gi|63055063 Fc fragment of IgG, high affinity Ib, receptor (CD64... 92 7e-20
gi|4503675 Fc fragment of IgE, high affinity I, receptor for; al... 69 1e-12
gi|157694526 Fc receptor-like 5 [Homo sapiens] 57 2e-09
gi|21314764 Fc receptor-like 3 precursor [Homo sapiens] 52 1e-07
gi|50878302 Fc receptor-like B [Homo sapiens] 50 4e-07
gi|14550416 Fc receptor-like 4 precursor [Homo sapiens] 42 1e-04
gi|13489095 sialoadhesin precursor [Homo sapiens] 38 0.001
gi|239750731 PREDICTED: hypothetical protein XP_002347518, parti... 36 0.007
gi|19923629 Fc receptor-like 2 precursor [Homo sapiens] 36 0.007
gi|157168355 CD22 molecule [Homo sapiens] 35 0.013
gi|125987588 leukocyte immunoglobulin-like receptor, subfamily B... 35 0.017
gi|125987585 leukocyte immunoglobulin-like receptor, subfamily B... 35 0.017
gi|195972797 leukocyte immunoglobulin-like receptor, subfamily A... 34 0.028
gi|5803068 leukocyte immunoglobulin-like receptor, subfamily A (... 34 0.028
gi|156564390 carcinoembryonic antigen-related cell adhesion mole... 33 0.037
>gi|239758047 PREDICTED: similar to hCG2039165 [Homo sapiens]
Length = 103
Score = 212 bits (539), Expect = 6e-56
Identities = 103/103 (100%), Positives = 103/103 (100%)
Query: 1 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 60
MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID
Sbjct: 1 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 60
Query: 61 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGELMKGKRKITNKR 103
AATVDDSGEYRCQTNLSTLSDPVQLEVHIGELMKGKRKITNKR
Sbjct: 61 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGELMKGKRKITNKR 103
>gi|189083840 Fc fragment of IgG, low affinity IIIa, receptor
(CD16a) isoform c precursor [Homo sapiens]
Length = 254
Score = 188 bits (477), Expect = 9e-49
Identities = 91/93 (97%), Positives = 92/93 (98%)
Query: 1 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 60
MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID
Sbjct: 18 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 77
Query: 61 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGELM 93
AATVDDSGEYRCQTNLSTLSDPVQLEVHIG L+
Sbjct: 78 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLL 110
Score = 28.9 bits (63), Expect = 0.91
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 17/68 (25%)
Query: 15 PQWYRVLEKDSVTLKCQG---------AYSPEDNSTQWFHNESLISSQASSYFIDAATVD 65
P+W E+D + L+C Y ++FH+ S ++I AT+
Sbjct: 114 PRWV-FKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNS-------DFYIPKATLK 165
Query: 66 DSGEYRCQ 73
DSG Y C+
Sbjct: 166 DSGSYFCR 173
>gi|189083838 Fc fragment of IgG, low affinity IIIa, receptor
(CD16a) isoform c precursor [Homo sapiens]
Length = 254
Score = 188 bits (477), Expect = 9e-49
Identities = 91/93 (97%), Positives = 92/93 (98%)
Query: 1 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 60
MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID
Sbjct: 18 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 77
Query: 61 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGELM 93
AATVDDSGEYRCQTNLSTLSDPVQLEVHIG L+
Sbjct: 78 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLL 110
Score = 28.9 bits (63), Expect = 0.91
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 17/68 (25%)
Query: 15 PQWYRVLEKDSVTLKCQG---------AYSPEDNSTQWFHNESLISSQASSYFIDAATVD 65
P+W E+D + L+C Y ++FH+ S ++I AT+
Sbjct: 114 PRWV-FKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNS-------DFYIPKATLK 165
Query: 66 DSGEYRCQ 73
DSG Y C+
Sbjct: 166 DSGSYFCR 173
>gi|50726979 Fc fragment of IgG, low affinity IIIa, receptor (CD16a)
isoform a precursor [Homo sapiens]
Length = 290
Score = 188 bits (477), Expect = 9e-49
Identities = 91/93 (97%), Positives = 92/93 (98%)
Query: 1 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 60
MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID
Sbjct: 54 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 113
Query: 61 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGELM 93
AATVDDSGEYRCQTNLSTLSDPVQLEVHIG L+
Sbjct: 114 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLL 146
Score = 28.9 bits (63), Expect = 0.91
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 17/68 (25%)
Query: 15 PQWYRVLEKDSVTLKCQG---------AYSPEDNSTQWFHNESLISSQASSYFIDAATVD 65
P+W E+D + L+C Y ++FH+ S ++I AT+
Sbjct: 150 PRWV-FKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNS-------DFYIPKATLK 201
Query: 66 DSGEYRCQ 73
DSG Y C+
Sbjct: 202 DSGSYFCR 209
>gi|132814489 low affinity immunoglobulin gamma Fc region receptor
III-B precursor [Homo sapiens]
Length = 233
Score = 182 bits (463), Expect = 4e-47
Identities = 88/93 (94%), Positives = 91/93 (97%)
Query: 1 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 60
MRTEDLPKAVVFLEPQWY VLEKDSVTLKCQGAYSPEDNSTQWFHNE+LISSQASSYFID
Sbjct: 18 MRTEDLPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNENLISSQASSYFID 77
Query: 61 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGELM 93
AATV+DSGEYRCQTNLSTLSDPVQLEVHIG L+
Sbjct: 78 AATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLL 110
Score = 27.3 bits (59), Expect = 2.6
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 15 PQWYRVLEKDSVTLKCQG---------AYSPEDNSTQWFHNESLISSQASSYFIDAATVD 65
P+W E+D + L+C Y ++FH+ S + I AT+
Sbjct: 114 PRWV-FKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNS-------DFHIPKATLK 165
Query: 66 DSGEYRCQ 73
DSG Y C+
Sbjct: 166 DSGSYFCR 173
>gi|189083842 Fc fragment of IgG, low affinity IIIa, receptor
(CD16a) isoform d precursor [Homo sapiens]
Length = 253
Score = 181 bits (460), Expect = 8e-47
Identities = 90/93 (96%), Positives = 91/93 (97%), Gaps = 1/93 (1%)
Query: 1 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 60
MRT DLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID
Sbjct: 18 MRT-DLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 76
Query: 61 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGELM 93
AATVDDSGEYRCQTNLSTLSDPVQLEVHIG L+
Sbjct: 77 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLL 109
Score = 28.9 bits (63), Expect = 0.91
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 17/68 (25%)
Query: 15 PQWYRVLEKDSVTLKCQG---------AYSPEDNSTQWFHNESLISSQASSYFIDAATVD 65
P+W E+D + L+C Y ++FH+ S ++I AT+
Sbjct: 113 PRWV-FKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNS-------DFYIPKATLK 164
Query: 66 DSGEYRCQ 73
DSG Y C+
Sbjct: 165 DSGSYFCR 172
>gi|189083836 Fc fragment of IgG, low affinity IIIa, receptor
(CD16a) isoform b precursor [Homo sapiens]
Length = 289
Score = 181 bits (460), Expect = 8e-47
Identities = 90/93 (96%), Positives = 91/93 (97%), Gaps = 1/93 (1%)
Query: 1 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 60
MRT DLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID
Sbjct: 54 MRT-DLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 112
Query: 61 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGELM 93
AATVDDSGEYRCQTNLSTLSDPVQLEVHIG L+
Sbjct: 113 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLL 145
Score = 28.9 bits (63), Expect = 0.91
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 17/68 (25%)
Query: 15 PQWYRVLEKDSVTLKCQG---------AYSPEDNSTQWFHNESLISSQASSYFIDAATVD 65
P+W E+D + L+C Y ++FH+ S ++I AT+
Sbjct: 149 PRWV-FKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNS-------DFYIPKATLK 200
Query: 66 DSGEYRCQ 73
DSG Y C+
Sbjct: 201 DSGSYFCR 208
>gi|50511928 Fc fragment of IgG, low affinity IIb, receptor isoform
4 [Homo sapiens]
Length = 309
Score = 95.5 bits (236), Expect = 8e-21
Identities = 45/81 (55%), Positives = 57/81 (70%)
Query: 7 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDD 66
PKAV+ LEPQW VL++DSVTL C+G +SPE +S QWFHN +LI + + A +D
Sbjct: 47 PKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNND 106
Query: 67 SGEYRCQTNLSTLSDPVQLEV 87
SGEY CQT ++LSDPV L V
Sbjct: 107 SGEYTCQTGQTSLSDPVHLTV 127
>gi|50511926 Fc fragment of IgG, low affinity IIb, receptor isoform
3 [Homo sapiens]
Length = 291
Score = 95.5 bits (236), Expect = 8e-21
Identities = 45/81 (55%), Positives = 57/81 (70%)
Query: 7 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDD 66
PKAV+ LEPQW VL++DSVTL C+G +SPE +S QWFHN +LI + + A +D
Sbjct: 48 PKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNND 107
Query: 67 SGEYRCQTNLSTLSDPVQLEV 87
SGEY CQT ++LSDPV L V
Sbjct: 108 SGEYTCQTGQTSLSDPVHLTV 128
>gi|50511932 Fc fragment of IgG, low affinity IIb, receptor isoform
2 [Homo sapiens]
Length = 290
Score = 95.5 bits (236), Expect = 8e-21
Identities = 45/81 (55%), Positives = 57/81 (70%)
Query: 7 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDD 66
PKAV+ LEPQW VL++DSVTL C+G +SPE +S QWFHN +LI + + A +D
Sbjct: 47 PKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNND 106
Query: 67 SGEYRCQTNLSTLSDPVQLEV 87
SGEY CQT ++LSDPV L V
Sbjct: 107 SGEYTCQTGQTSLSDPVHLTV 127
>gi|50511930 Fc fragment of IgG, low affinity IIb, receptor isoform
1 [Homo sapiens]
Length = 310
Score = 95.5 bits (236), Expect = 8e-21
Identities = 45/81 (55%), Positives = 57/81 (70%)
Query: 7 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDD 66
PKAV+ LEPQW VL++DSVTL C+G +SPE +S QWFHN +LI + + A +D
Sbjct: 48 PKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNND 107
Query: 67 SGEYRCQTNLSTLSDPVQLEV 87
SGEY CQT ++LSDPV L V
Sbjct: 108 SGEYTCQTGQTSLSDPVHLTV 128
>gi|210031822 Fc fragment of IgG, low affinity IIa, receptor isoform
1 [Homo sapiens]
Length = 317
Score = 94.7 bits (234), Expect = 1e-20
Identities = 46/81 (56%), Positives = 56/81 (69%)
Query: 7 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDD 66
PKAV+ LEP W VL++DSVTL CQGA SPE +S QWFHN +LI + + A +D
Sbjct: 39 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNND 98
Query: 67 SGEYRCQTNLSTLSDPVQLEV 87
SGEY CQT ++LSDPV L V
Sbjct: 99 SGEYTCQTGQTSLSDPVHLTV 119
>gi|50511936 Fc fragment of IgG, low affinity IIa, receptor isoform
2 [Homo sapiens]
Length = 316
Score = 94.7 bits (234), Expect = 1e-20
Identities = 46/81 (56%), Positives = 56/81 (69%)
Query: 7 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDD 66
PKAV+ LEP W VL++DSVTL CQGA SPE +S QWFHN +LI + + A +D
Sbjct: 38 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNND 97
Query: 67 SGEYRCQTNLSTLSDPVQLEV 87
SGEY CQT ++LSDPV L V
Sbjct: 98 SGEYTCQTGQTSLSDPVHLTV 118
>gi|126116592 Fc fragment of IgG, low affinity IIc, receptor [Homo
sapiens]
Length = 323
Score = 93.2 bits (230), Expect = 4e-20
Identities = 44/81 (54%), Positives = 56/81 (69%)
Query: 7 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDD 66
PKAV+ LEPQW VL++DSVTL C+G +SPE +S WFHN +LI + + A +D
Sbjct: 48 PKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIPWFHNGNLIPTHTQPSYRFKANNND 107
Query: 67 SGEYRCQTNLSTLSDPVQLEV 87
SGEY CQT ++LSDPV L V
Sbjct: 108 SGEYTCQTGQTSLSDPVHLTV 128
>gi|10835133 Fc fragment of IgG, high affinity Ia, receptor (CD64)
[Homo sapiens]
Length = 374
Score = 92.4 bits (228), Expect = 7e-20
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 5 DLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATV 64
D KAV+ L+P W V ++++VTL C+ + P +STQWF N + + SY I +A+V
Sbjct: 18 DTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASV 77
Query: 65 DDSGEYRCQTNLSTLSDPVQLEVHIGELM 93
+DSGEYRCQ LS SDP+QLE+H G L+
Sbjct: 78 NDSGEYRCQRGLSGRSDPIQLEIHRGWLL 106
>gi|63055063 Fc fragment of IgG, high affinity Ib, receptor (CD64)
isoform a [Homo sapiens]
Length = 280
Score = 92.4 bits (228), Expect = 7e-20
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 5 DLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATV 64
D KAV+ L+P W V ++++VTL C+ + P +STQWF N + + SY I +A+V
Sbjct: 18 DTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASV 77
Query: 65 DDSGEYRCQTNLSTLSDPVQLEVHIGELM 93
+DSGEYRCQ LS SDP+QLE+H G L+
Sbjct: 78 NDSGEYRCQRGLSGRSDPIQLEIHRGWLL 106
>gi|4503675 Fc fragment of IgE, high affinity I, receptor for; alpha
polypeptide precursor [Homo sapiens]
Length = 257
Score = 68.6 bits (166), Expect = 1e-12
Identities = 37/80 (46%), Positives = 46/80 (57%)
Query: 8 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDS 67
K V L P W R+ + ++VTL C G E +ST+WFHN SL SS I A +DS
Sbjct: 29 KPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETNSSLNIVNAKFEDS 88
Query: 68 GEYRCQTNLSTLSDPVQLEV 87
GEY+CQ S+PV LEV
Sbjct: 89 GEYKCQHQQVNESEPVYLEV 108
Score = 25.8 bits (55), Expect = 7.7
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 21/81 (25%)
Query: 20 VLEKDSVTLKCQG----------AYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGE 69
V+E + L+C G Y + W+ N ++ I ATV+DSG
Sbjct: 122 VMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNIS--------ITNATVEDSGT 173
Query: 70 YRCQTNLSTL---SDPVQLEV 87
Y C + L S+P+ + V
Sbjct: 174 YYCTGKVWQLDYESEPLNITV 194
>gi|157694526 Fc receptor-like 5 [Homo sapiens]
Length = 977
Score = 57.4 bits (137), Expect = 2e-09
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 7 PKAVVFLEPQWYRVLEKDSVTLKCQG--AYSPEDNSTQWFH---NESLISSQASSYFIDA 61
P+ ++FL+P W V + + VTL C+G YSP+ T+W+H + ++ +
Sbjct: 21 PRPIIFLQPPWTTVFQGERVTLTCKGFRFYSPQ--KTKWYHRYLGKEILRETPDNIL--- 75
Query: 62 ATVDDSGEYRCQTNLSTLSDPVQLEVHIGELM 93
V +SGEYRCQ S LS PV L+ L+
Sbjct: 76 -EVQESGEYRCQAQGSPLSSPVHLDFSSASLI 106
>gi|21314764 Fc receptor-like 3 precursor [Homo sapiens]
Length = 734
Score = 52.0 bits (123), Expect = 1e-07
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 7 PKAVVFLEPQWYRVLEKDSVTLKCQG-AYSPEDNSTQWFHNESLISSQASSYFIDAATVD 65
PKAV+ L P W + + V L C ++S T W+H+E L+ + D +
Sbjct: 21 PKAVLLLNPPWSTAFKGEKVALICSSISHSLAQGDTYWYHDEKLLKIKH-----DKIQIT 75
Query: 66 DSGEYRCQTNLSTLSDPVQLE 86
+ G Y+C+T S+LSD V +E
Sbjct: 76 EPGNYQCKTRGSSLSDAVHVE 96
Score = 27.3 bits (59), Expect = 2.6
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 21/104 (20%)
Query: 2 RTEDLPKAV-VFLEPQW------YRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQA 54
R L AV V P W + V E D+V L+CQG + + ++ + +
Sbjct: 85 RGSSLSDAVHVEFSPDWLILQALHPVFEGDNVILRCQGKDNKNTHQKVYYKDGKQL---P 141
Query: 55 SSYFIDAATVD----DSGEYRCQT-------NLSTLSDPVQLEV 87
+SY ++ TV+ D+ +Y C ++ S P+ ++V
Sbjct: 142 NSYNLEKITVNSVSRDNSKYHCTAYRKFYILDIEVTSKPLNIQV 185
>gi|50878302 Fc receptor-like B [Homo sapiens]
Length = 426
Score = 50.1 bits (118), Expect = 4e-07
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 6 LPKAVVFLEPQWYRVLEKDSVTLKCQGAYSP-----EDNSTQWFHNESLISSQASSYFID 60
L K ++ L P W + + + VTLKC G Y P + ST W+ L+ S S
Sbjct: 20 LEKPILSLHPPWTTIFKGERVTLKCDG-YHPLLLELQPISTLWYLGHLLLPSHKKS---- 74
Query: 61 AATVDDSGEYRCQTNLSTLSDPVQLEV 87
V G YRCQT + +SDP+ L V
Sbjct: 75 -IEVQTPGVYRCQTRGAPVSDPIHLSV 100
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 11 VFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLIS--SQASSYFIDAATVDDSG 68
+ L+ + V E + + L+C+G Y ++H+ + +++Y + A DSG
Sbjct: 105 LILQVPYAPVFEGEPLVLRCRGWYDKVVYKLHYYHDGQAVRYFHSSANYTVLQARASDSG 164
Query: 69 EYRCQTNLSTLSDPVQ 84
Y+C T+ PV+
Sbjct: 165 RYQCS---GTMRIPVE 177
>gi|14550416 Fc receptor-like 4 precursor [Homo sapiens]
Length = 515
Score = 41.6 bits (96), Expect = 1e-04
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 8 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFH----NESLISSQASSYFIDAAT 63
K V+ + P W + + VTL C G T W+H E L + ++
Sbjct: 22 KPVISVHPPWTTFFKGERVTLTCNGFQFYATEKTTWYHRHYWGEKLTLTPGNT-----LE 76
Query: 64 VDDSGEYRCQTNLSTLSDPVQL 85
V +SG YRCQ S S+PV+L
Sbjct: 77 VRESGLYRCQARGSPRSNPVRL 98
Score = 29.3 bits (64), Expect = 0.70
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 18 YRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSY--FIDAATVDDSGEYRC 72
Y V E D++ L+C + + ++ N +++S S+ I A+ +++G YRC
Sbjct: 111 YSVFEGDTLVLRCHRRRKEKLTAVKYTWNGNILSISNKSWDLLIPQASSNNNGNYRC 167
>gi|13489095 sialoadhesin precursor [Homo sapiens]
Length = 1709
Score = 38.1 bits (87), Expect = 0.001
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 7 PKAV-VFLEPQWYRVLEKDSVTLKCQGAYS-PEDNSTQWFHNESLISSQASSYFIDAATV 64
PK V + L P +L + VTL CQ S P +S +W + + ++ + A
Sbjct: 238 PKGVKILLSPSGRNILPGELVTLTCQVNSSYPAVSSIKWLKDGVRLQTKTGVLHLPQAAW 297
Query: 65 DDSGEYRCQTNL---STLSDPVQLEVHIGEL 92
D+G Y CQ S +S P+ L + + E+
Sbjct: 298 SDAGVYTCQAENGVGSLVSPPISLHIFMAEV 328
Score = 36.6 bits (83), Expect = 0.004
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 20 VLEKDSVTLKCQGAYSPE-DNSTQWFHNESLI-SSQASSYFIDAATVDDSGEYRCQ 73
V+E +VTL C+ SP D W+ N +L+ SS + AA+ D+G Y C+
Sbjct: 521 VVEGQAVTLSCRSGLSPTPDARFSWYLNGALLHEGPGSSLLLPAASSTDAGSYHCR 576
>gi|239750731 PREDICTED: hypothetical protein XP_002347518, partial
[Homo sapiens]
Length = 214
Score = 35.8 bits (81), Expect = 0.007
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 7 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNE 47
P+ F P+W +K ++T Q + PED S QW HNE
Sbjct: 110 PEVYAFATPEWLGSRDKRTLTCLIQN-FMPEDISVQWLHNE 149
>gi|19923629 Fc receptor-like 2 precursor [Homo sapiens]
Length = 508
Score = 35.8 bits (81), Expect = 0.007
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 20 VLEKDSVTLKCQGAYSPEDNSTQWFHNESLIS--SQASSYFIDAATVDDSGEYRCQT 74
V E DS+ LKCQG + + + + +S + S + I +A + DSG Y C T
Sbjct: 28 VFEGDSIVLKCQGEQNWKIQKMAYHKDNKELSVFKKFSDFLIQSAVLSDSGNYFCST 84
>gi|157168355 CD22 molecule [Homo sapiens]
Length = 847
Score = 35.0 bits (79), Expect = 0.013
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 1 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQ-GAYSPEDNSTQWFHNESLISSQAS-SYF 58
+ + PK + + P V E DSVT+ C+ + +PE + W + + + Q + +
Sbjct: 236 LNVKHTPKLEIKVTPSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSLKKQNTFTLN 295
Query: 59 IDAATVDDSGEYRCQTN 75
+ T D SG+Y CQ +
Sbjct: 296 LREVTKDQSGKYCCQVS 312
Score = 29.6 bits (65), Expect = 0.53
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 19 RVLEKDSVTLKCQGAYSPEDNSTQWFH-NESLISSQASSYFIDAATVDDSGEYRCQ 73
+V+E S TL C+ +P + WF N + + ++ V SG Y CQ
Sbjct: 605 QVMEGKSATLTCESDANPPVSHYTWFDWNNQSLPYHSQKLRLEPVKVQHSGAYWCQ 660
Score = 29.3 bits (64), Expect = 0.70
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 24 DSVTLKCQGAYS-PEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTNLS---TL 79
+SV+L+C + S P++ W N L+ ++ F D+ + +D+G Y C N S T
Sbjct: 523 NSVSLQCDFSSSHPKEVQFFWEKNGRLLGKESQLNF-DSISPEDAGSYSCWVNNSIGQTA 581
Query: 80 SDPVQLEV 87
S LEV
Sbjct: 582 SKAWTLEV 589
>gi|125987588 leukocyte immunoglobulin-like receptor, subfamily B,
member 4 isoform 2 [Homo sapiens]
Length = 447
Score = 34.7 bits (78), Expect = 0.017
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 1 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSP-------EDNSTQWFHNESLISSQ 53
M+ LPK ++ EP + +SVT+ CQG E++ W L
Sbjct: 21 MQAGPLPKPTLWAEPGSV-ISWGNSVTIWCQGTLEAREYRLDKEESPAPWDRQNPLEPKN 79
Query: 54 ASSYFIDAATVDDSGEYRC----QTNLSTLSDPVQL 85
+ + I + T D +G YRC S SDP++L
Sbjct: 80 KARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLEL 115
>gi|125987585 leukocyte immunoglobulin-like receptor, subfamily B,
member 4 isoform 1 [Homo sapiens]
Length = 448
Score = 34.7 bits (78), Expect = 0.017
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 1 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSP-------EDNSTQWFHNESLISSQ 53
M+ LPK ++ EP + +SVT+ CQG E++ W L
Sbjct: 21 MQAGPLPKPTLWAEPGSV-ISWGNSVTIWCQGTLEAREYRLDKEESPAPWDRQNPLEPKN 79
Query: 54 ASSYFIDAATVDDSGEYRC----QTNLSTLSDPVQL 85
+ + I + T D +G YRC S SDP++L
Sbjct: 80 KARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLEL 115
>gi|195972797 leukocyte immunoglobulin-like receptor, subfamily A
(with TM domain), member 2 isoform a [Homo sapiens]
Length = 483
Score = 33.9 bits (76), Expect = 0.028
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 6 LPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPED-------NSTQWFHNESLISSQASSYF 58
LPK ++ EP +++ VTL+CQG+ E+ S W + +
Sbjct: 26 LPKPTLWAEPGSV-IIQGSPVTLRCQGSLQAEEYHLYRENKSASWVRRIQ-EPGKNGQFP 83
Query: 59 IDAATVDDSGEYRCQ----TNLSTLSDPVQLEV 87
I + T + +G Y CQ + S SDP++L V
Sbjct: 84 IPSITWEHAGRYHCQYYSHNHSSEYSDPLELVV 116
>gi|5803068 leukocyte immunoglobulin-like receptor, subfamily A
(with TM domain), member 2 isoform b [Homo sapiens]
Length = 466
Score = 33.9 bits (76), Expect = 0.028
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 6 LPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPED-------NSTQWFHNESLISSQASSYF 58
LPK ++ EP +++ VTL+CQG+ E+ S W + +
Sbjct: 26 LPKPTLWAEPGSV-IIQGSPVTLRCQGSLQAEEYHLYRENKSASWVRRIQ-EPGKNGQFP 83
Query: 59 IDAATVDDSGEYRCQ----TNLSTLSDPVQLEV 87
I + T + +G Y CQ + S SDP++L V
Sbjct: 84 IPSITWEHAGRYHCQYYSHNHSSEYSDPLELVV 116
>gi|156564390 carcinoembryonic antigen-related cell adhesion
molecule 20 4L [Homo sapiens]
Length = 503
Score = 33.5 bits (75), Expect = 0.037
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 10/98 (10%)
Query: 2 RTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGA------YSPEDNSTQWFHNESLISSQAS 55
R+ +L K + + P + +KD VT C + +N + FH +S
Sbjct: 63 RSRELAKPSIAVSPGT-AIEQKDMVTFYCTTKDVNITIHWVSNNLSVVFHERMQLSKDGK 121
Query: 56 SYFIDAATVDDSGEYRCQTN---LSTLSDPVQLEVHIG 90
I +DSG Y+C+ LS SDP+ L+V G
Sbjct: 122 ILTILIVQREDSGTYQCEARDALLSQRSDPIFLDVKYG 159
Score = 28.1 bits (61), Expect = 1.6
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 20 VLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRC-----QT 74
V+E S+T + P T WF +S++S ++ I A + + G YRC T
Sbjct: 179 VMEGSSMTFLAETKSHPPCAYT-WFLLDSILSHTTRTFTIHAVSREHEGLYRCLVSNSAT 237
Query: 75 NLSTL 79
+LS+L
Sbjct: 238 HLSSL 242
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,552,856
Number of Sequences: 37866
Number of extensions: 123553
Number of successful extensions: 591
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 461
Number of HSP's gapped (non-prelim): 203
length of query: 103
length of database: 18,247,518
effective HSP length: 74
effective length of query: 29
effective length of database: 15,445,434
effective search space: 447917586
effective search space used: 447917586
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.