Search of human proteins with 239750681

Search of human proteins with 239750681

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239750681 PREDICTED: hypothetical protein XP_002347504 [Homo
sapiens]
         (217 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756165 PREDICTED: hypothetical protein [Homo sapiens]           442   e-125
gi|239750681 PREDICTED: hypothetical protein XP_002347504 [Homo ...   442   e-125
gi|239744991 PREDICTED: hypothetical protein XP_002343323 [Homo ...   441   e-124
gi|229577391 pyridine nucleotide-disulphide oxidoreductase domai...    30   1.2  
gi|38679909 testis expressed sequence 2 [Homo sapiens]                 30   2.1  
gi|32528293 ecto-NOX disulfide-thiol exchanger 2 isoform a [Homo...    28   6.0  
gi|32528291 ecto-NOX disulfide-thiol exchanger 2 isoform b [Homo...    28   6.0  
gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens]      28   7.8  

>gi|239756165 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 270

 Score =  442 bits (1138), Expect = e-125
 Identities = 217/217 (100%), Positives = 217/217 (100%)

Query: 1   MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH 60
           MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH
Sbjct: 54  MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH 113

Query: 61  NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS 120
           NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS
Sbjct: 114 NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS 173

Query: 121 PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN 180
           PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN
Sbjct: 174 PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN 233

Query: 181 LTQITVLSISTRNIQHFSPSSQRMGSVYTECHLKHPH 217
           LTQITVLSISTRNIQHFSPSSQRMGSVYTECHLKHPH
Sbjct: 234 LTQITVLSISTRNIQHFSPSSQRMGSVYTECHLKHPH 270


>gi|239750681 PREDICTED: hypothetical protein XP_002347504 [Homo
           sapiens]
          Length = 217

 Score =  442 bits (1138), Expect = e-125
 Identities = 217/217 (100%), Positives = 217/217 (100%)

Query: 1   MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH 60
           MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH
Sbjct: 1   MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH 60

Query: 61  NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS 120
           NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS
Sbjct: 61  NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS 120

Query: 121 PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN 180
           PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN
Sbjct: 121 PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN 180

Query: 181 LTQITVLSISTRNIQHFSPSSQRMGSVYTECHLKHPH 217
           LTQITVLSISTRNIQHFSPSSQRMGSVYTECHLKHPH
Sbjct: 181 LTQITVLSISTRNIQHFSPSSQRMGSVYTECHLKHPH 217


>gi|239744991 PREDICTED: hypothetical protein XP_002343323 [Homo
           sapiens]
          Length = 217

 Score =  441 bits (1133), Expect = e-124
 Identities = 216/217 (99%), Positives = 216/217 (99%)

Query: 1   MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH 60
           MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH
Sbjct: 1   MRKISPLSLTHVEKMDEIKINWTKWYKGSYVEDAFYYPAIPSCATMILNVGKRIQKTVSH 60

Query: 61  NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS 120
           NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS
Sbjct: 61  NAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLAS 120

Query: 121 PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN 180
           PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN
Sbjct: 121 PSTDAGCRSFFLLPRHRGLKPSHRLITGLLQWALGGRSFSFLPIFSTFYEKDFQALSASN 180

Query: 181 LTQITVLSISTRNIQHFSPSSQRMGSVYTECHLKHPH 217
           LTQIT LSISTRNIQHFSPSSQRMGSVYTECHLKHPH
Sbjct: 181 LTQITFLSISTRNIQHFSPSSQRMGSVYTECHLKHPH 217


>gi|229577391 pyridine nucleotide-disulphide oxidoreductase domain 2
           [Homo sapiens]
          Length = 581

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)

Query: 63  EGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSI--FLQKLREVTSPSSPLAS 120
           EGA  K+P  LL+G   AE+++  A+F +   KD+++ P    F+ +L     P    A+
Sbjct: 125 EGAGSKVPRCLLLGTDMAENQKQIAQFSQ---KDAQVFPKYEEFMHRLALAIDPLLD-AA 180

Query: 121 PSTDAGCRSFFLLPRHRGL 139
           P   A  +   LL R R L
Sbjct: 181 PVDMAAFQHGSLLQRMRSL 199


>gi|38679909 testis expressed sequence 2 [Homo sapiens]
          Length = 1134

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 10/68 (14%)

Query: 74  LVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLR-------EVTSPSSPLASPSTDAG 126
           LV     ++ R  ++    K  DSKL   +F Q  +         T+PSSPL SPS    
Sbjct: 217 LVKSLSTDTSRQESDTVSYKPPDSKLNLHLFKQFTQPRNTGGDSKTAPSSPLTSPS---D 273

Query: 127 CRSFFLLP 134
            RSFF +P
Sbjct: 274 TRSFFKVP 281


>gi|32528293 ecto-NOX disulfide-thiol exchanger 2 isoform a [Homo
           sapiens]
          Length = 581

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 81  ESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLASPSTDA 125
           E ++  AE EK   KD KLQ    L+ L+E  S +S L + + D+
Sbjct: 445 EYKKKEAELEK--LKDDKLQVEKMLENLKEKESCASRLCASNQDS 487


>gi|32528291 ecto-NOX disulfide-thiol exchanger 2 isoform b [Homo
           sapiens]
          Length = 610

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 81  ESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTSPSSPLASPSTDA 125
           E ++  AE EK   KD KLQ    L+ L+E  S +S L + + D+
Sbjct: 474 EYKKKEAELEK--LKDDKLQVEKMLENLKEKESCASRLCASNQDS 516


>gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens]
          Length = 1844

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 54   IQKTVSHNAEGAQCKLPWGLLVGEGRAESRRSAAEFEKAKFKDSKLQPSIFLQKLREVTS 113
            ++K + H    ++C     L       E++R   E E +K K  K  P+ + + L +   
Sbjct: 968  LKKQIEHQVLSSECHSKQELEADVSHKETKRKLVEAENSKSKRKK--PNEYSKNLEKTNR 1025

Query: 114  PSSPLASPSTDAGCR 128
             S  L+  +  +G +
Sbjct: 1026 KSEELSKRNNSSGIK 1040


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.132    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,400,959
Number of Sequences: 37866
Number of extensions: 363472
Number of successful extensions: 853
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 849
Number of HSP's gapped (non-prelim): 9
length of query: 217
length of database: 18,247,518
effective HSP length: 98
effective length of query: 119
effective length of database: 14,536,650
effective search space: 1729861350
effective search space used: 1729861350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.