Search of human proteins with 239746938

Search of human proteins with 239746938

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746938 PREDICTED: similar to hCG1736317 isoform 1 [Homo
sapiens]
         (242 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239746938 PREDICTED: similar to hCG1736317 isoform 1 [Homo sa...   488   e-138
gi|239746940 PREDICTED: similar to hCG1736317 isoform 2 [Homo sa...   439   e-123
gi|169217258 PREDICTED: similar to hCG1736317 [Homo sapiens]          424   e-119
gi|72534700 hypothetical protein LOC54967 isoform 1 [Homo sapiens]    384   e-107
gi|8923493 hypothetical protein LOC54967 isoform 2 [Homo sapiens]     384   e-107
gi|169217256 PREDICTED: similar to chromosome X open reading fra...   335   3e-92
gi|169216878 PREDICTED: similar to chromosome X open reading fra...   335   3e-92
gi|14251207 MOV10-like 1 [Homo sapiens]                               227   6e-60
gi|40548408 p30 DBC protein [Homo sapiens]                             37   0.020
gi|24432106 p30 DBC protein [Homo sapiens]                             37   0.020
gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo ...    35   0.059
gi|132814467 glutamyl aminopeptidase [Homo sapiens]                    29   4.2  
gi|227499621 solute carrier family 27 (fatty acid transporter), ...    28   5.5  
gi|227499619 solute carrier family 27 (fatty acid transporter), ...    28   5.5  
gi|6005824 Sec23-interacting protein p125 [Homo sapiens]               28   9.4  

>gi|239746938 PREDICTED: similar to hCG1736317 isoform 1 [Homo
           sapiens]
          Length = 242

 Score =  488 bits (1257), Expect = e-138
 Identities = 242/242 (100%), Positives = 242/242 (100%)

Query: 1   MLRLLRRALAFFHSTAHPTEQQGPQQQGLPEGDTQLTTVQGVVTSFCGDYGVIDESIYFS 60
           MLRLLRRALAFFHSTAHPTEQQGPQQQGLPEGDTQLTTVQGVVTSFCGDYGVIDESIYFS
Sbjct: 1   MLRLLRRALAFFHSTAHPTEQQGPQQQGLPEGDTQLTTVQGVVTSFCGDYGVIDESIYFS 60

Query: 61  SDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVPHPLNDDGPSDSKIRVLNGCVTS 120
           SDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVPHPLNDDGPSDSKIRVLNGCVTS
Sbjct: 61  SDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVPHPLNDDGPSDSKIRVLNGCVTS 120

Query: 121 ISEDTVYISNIIYFPMDIVSEDFVPYKGNWLKVEYSTEPGFLNFKASSVKPTRCIHAEAV 180
           ISEDTVYISNIIYFPMDIVSEDFVPYKGNWLKVEYSTEPGFLNFKASSVKPTRCIHAEAV
Sbjct: 121 ISEDTVYISNIIYFPMDIVSEDFVPYKGNWLKVEYSTEPGFLNFKASSVKPTRCIHAEAV 180

Query: 181 RITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCFKWRAVSITPVQ 240
           RITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCFKWRAVSITPVQ
Sbjct: 181 RITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCFKWRAVSITPVQ 240

Query: 241 KS 242
           KS
Sbjct: 241 KS 242


>gi|239746940 PREDICTED: similar to hCG1736317 isoform 2 [Homo
           sapiens]
          Length = 224

 Score =  439 bits (1128), Expect = e-123
 Identities = 224/242 (92%), Positives = 224/242 (92%), Gaps = 18/242 (7%)

Query: 1   MLRLLRRALAFFHSTAHPTEQQGPQQQGLPEGDTQLTTVQGVVTSFCGDYGVIDESIYFS 60
           MLRLLRRALAFFHS                  DTQLTTVQGVVTSFCGDYGVIDESIYFS
Sbjct: 1   MLRLLRRALAFFHS------------------DTQLTTVQGVVTSFCGDYGVIDESIYFS 42

Query: 61  SDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVPHPLNDDGPSDSKIRVLNGCVTS 120
           SDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVPHPLNDDGPSDSKIRVLNGCVTS
Sbjct: 43  SDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVPHPLNDDGPSDSKIRVLNGCVTS 102

Query: 121 ISEDTVYISNIIYFPMDIVSEDFVPYKGNWLKVEYSTEPGFLNFKASSVKPTRCIHAEAV 180
           ISEDTVYISNIIYFPMDIVSEDFVPYKGNWLKVEYSTEPGFLNFKASSVKPTRCIHAEAV
Sbjct: 103 ISEDTVYISNIIYFPMDIVSEDFVPYKGNWLKVEYSTEPGFLNFKASSVKPTRCIHAEAV 162

Query: 181 RITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCFKWRAVSITPVQ 240
           RITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCFKWRAVSITPVQ
Sbjct: 163 RITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCFKWRAVSITPVQ 222

Query: 241 KS 242
           KS
Sbjct: 223 KS 224


>gi|169217258 PREDICTED: similar to hCG1736317 [Homo sapiens]
          Length = 235

 Score =  424 bits (1089), Expect = e-119
 Identities = 210/210 (100%), Positives = 210/210 (100%)

Query: 33  DTQLTTVQGVVTSFCGDYGVIDESIYFSSDVVTGNVPLKVGQKVNVVVEEDKILYGLRAI 92
           DTQLTTVQGVVTSFCGDYGVIDESIYFSSDVVTGNVPLKVGQKVNVVVEEDKILYGLRAI
Sbjct: 26  DTQLTTVQGVVTSFCGDYGVIDESIYFSSDVVTGNVPLKVGQKVNVVVEEDKILYGLRAI 85

Query: 93  KVDVVPHPLNDDGPSDSKIRVLNGCVTSISEDTVYISNIIYFPMDIVSEDFVPYKGNWLK 152
           KVDVVPHPLNDDGPSDSKIRVLNGCVTSISEDTVYISNIIYFPMDIVSEDFVPYKGNWLK
Sbjct: 86  KVDVVPHPLNDDGPSDSKIRVLNGCVTSISEDTVYISNIIYFPMDIVSEDFVPYKGNWLK 145

Query: 153 VEYSTEPGFLNFKASSVKPTRCIHAEAVRITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQ 212
           VEYSTEPGFLNFKASSVKPTRCIHAEAVRITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQ
Sbjct: 146 VEYSTEPGFLNFKASSVKPTRCIHAEAVRITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQ 205

Query: 213 VDDIVNVVMVESIQFCFKWRAVSITPVQKS 242
           VDDIVNVVMVESIQFCFKWRAVSITPVQKS
Sbjct: 206 VDDIVNVVMVESIQFCFKWRAVSITPVQKS 235


>gi|72534700 hypothetical protein LOC54967 isoform 1 [Homo sapiens]
          Length = 264

 Score =  384 bits (986), Expect = e-107
 Identities = 196/242 (80%), Positives = 209/242 (86%)

Query: 1   MLRLLRRALAFFHSTAHPTEQQGPQQQGLPEGDTQLTTVQGVVTSFCGDYGVIDESIYFS 60
           MLRLLR ALAF+  TA P E+QGPQQQGLP+GDTQLTTVQGVVTSFCGDYG+IDESIYFS
Sbjct: 1   MLRLLRLALAFYGRTADPAERQGPQQQGLPQGDTQLTTVQGVVTSFCGDYGMIDESIYFS 60

Query: 61  SDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVPHPLNDDGPSDSKIRVLNGCVTS 120
           SDVVTGNVPLKVGQKVNVVVEEDK  YGLRAIKVDVVP  L   GPSDS  RVL GCVTS
Sbjct: 61  SDVVTGNVPLKVGQKVNVVVEEDKPHYGLRAIKVDVVPRHLYGAGPSDSGTRVLIGCVTS 120

Query: 121 ISEDTVYISNIIYFPMDIVSEDFVPYKGNWLKVEYSTEPGFLNFKASSVKPTRCIHAEAV 180
           I+ED +YISN IYF + IVSEDFVPYKG+ L+VEYSTEPG  N KA+SVKP RCIH E V
Sbjct: 121 INEDNIYISNSIYFSIAIVSEDFVPYKGDLLEVEYSTEPGISNIKATSVKPIRCIHTEEV 180

Query: 181 RITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCFKWRAVSITPVQ 240
            IT + GR+GVI  TIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCF WRA+SITPV 
Sbjct: 181 CITSVHGRNGVIDYTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCFIWRAISITPVH 240

Query: 241 KS 242
           KS
Sbjct: 241 KS 242


>gi|8923493 hypothetical protein LOC54967 isoform 2 [Homo sapiens]
          Length = 242

 Score =  384 bits (986), Expect = e-107
 Identities = 196/242 (80%), Positives = 209/242 (86%)

Query: 1   MLRLLRRALAFFHSTAHPTEQQGPQQQGLPEGDTQLTTVQGVVTSFCGDYGVIDESIYFS 60
           MLRLLR ALAF+  TA P E+QGPQQQGLP+GDTQLTTVQGVVTSFCGDYG+IDESIYFS
Sbjct: 1   MLRLLRLALAFYGRTADPAERQGPQQQGLPQGDTQLTTVQGVVTSFCGDYGMIDESIYFS 60

Query: 61  SDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVPHPLNDDGPSDSKIRVLNGCVTS 120
           SDVVTGNVPLKVGQKVNVVVEEDK  YGLRAIKVDVVP  L   GPSDS  RVL GCVTS
Sbjct: 61  SDVVTGNVPLKVGQKVNVVVEEDKPHYGLRAIKVDVVPRHLYGAGPSDSGTRVLIGCVTS 120

Query: 121 ISEDTVYISNIIYFPMDIVSEDFVPYKGNWLKVEYSTEPGFLNFKASSVKPTRCIHAEAV 180
           I+ED +YISN IYF + IVSEDFVPYKG+ L+VEYSTEPG  N KA+SVKP RCIH E V
Sbjct: 121 INEDNIYISNSIYFSIAIVSEDFVPYKGDLLEVEYSTEPGISNIKATSVKPIRCIHTEEV 180

Query: 181 RITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCFKWRAVSITPVQ 240
            IT + GR+GVI  TIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCF WRA+SITPV 
Sbjct: 181 CITSVHGRNGVIDYTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCFIWRAISITPVH 240

Query: 241 KS 242
           KS
Sbjct: 241 KS 242


>gi|169217256 PREDICTED: similar to chromosome X open reading frame
           48 [Homo sapiens]
          Length = 224

 Score =  335 bits (858), Expect = 3e-92
 Identities = 169/197 (85%), Positives = 175/197 (88%)

Query: 46  FCGDYGVIDESIYFSSDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVPHPLNDDG 105
           FCGDYG+IDESIYFSSDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVP  L   G
Sbjct: 6   FCGDYGMIDESIYFSSDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVPRHLYGAG 65

Query: 106 PSDSKIRVLNGCVTSISEDTVYISNIIYFPMDIVSEDFVPYKGNWLKVEYSTEPGFLNFK 165
           PSDS  RVL GCVTSI ED +YISN IYF +DIVSEDFVPYKGNWLKVEYSTEPGF NFK
Sbjct: 66  PSDSGTRVLIGCVTSICEDIIYISNCIYFFIDIVSEDFVPYKGNWLKVEYSTEPGFSNFK 125

Query: 166 ASSVKPTRCIHAEAVRITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQVDDIVNVVMVESI 225
           ASSVK T CIHAEAV IT + GR+GVI  TIFFTLDSVKLPDGYVPQVDDIVNVVMVESI
Sbjct: 126 ASSVKSTHCIHAEAVCITSVHGRNGVIDYTIFFTLDSVKLPDGYVPQVDDIVNVVMVESI 185

Query: 226 QFCFKWRAVSITPVQKS 242
           QFCF WRA+SITPV KS
Sbjct: 186 QFCFIWRAISITPVHKS 202



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 33/121 (27%), Positives = 47/121 (38%), Gaps = 15/121 (12%)

Query: 28  GLPEGDTQLTTVQGVVTSFCGDYGVIDESIYFSSDVVTGN-VPLKVGQKVNVVVEEDKIL 86
           G    D+    + G VTS C D   I   IYF  D+V+ + VP K G  + V    +   
Sbjct: 63  GAGPSDSGTRVLIGCVTSICEDIIYISNCIYFFIDIVSEDFVPYK-GNWLKVEYSTEPGF 121

Query: 87  YGLRAIKVDVVPHPLNDDGPSDSKIRVLNGCVTSISEDTVYISNIIYFPMDIVS--EDFV 144
              +A  V            S   I     C+TS+      I   I+F +D V   + +V
Sbjct: 122 SNFKASSV-----------KSTHCIHAEAVCITSVHGRNGVIDYTIFFTLDSVKLPDGYV 170

Query: 145 P 145
           P
Sbjct: 171 P 171


>gi|169216878 PREDICTED: similar to chromosome X open reading frame
           48 [Homo sapiens]
          Length = 224

 Score =  335 bits (858), Expect = 3e-92
 Identities = 169/197 (85%), Positives = 175/197 (88%)

Query: 46  FCGDYGVIDESIYFSSDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVPHPLNDDG 105
           FCGDYG+IDESIYFSSDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVP  L   G
Sbjct: 6   FCGDYGMIDESIYFSSDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVPRHLYGAG 65

Query: 106 PSDSKIRVLNGCVTSISEDTVYISNIIYFPMDIVSEDFVPYKGNWLKVEYSTEPGFLNFK 165
           PSDS  RVL GCVTSI ED +YISN IYF +DIVSEDFVPYKGNWLKVEYSTEPGF NFK
Sbjct: 66  PSDSGTRVLIGCVTSICEDIIYISNCIYFFIDIVSEDFVPYKGNWLKVEYSTEPGFSNFK 125

Query: 166 ASSVKPTRCIHAEAVRITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQVDDIVNVVMVESI 225
           ASSVK T CIHAEAV IT + GR+GVI  TIFFTLDSVKLPDGYVPQVDDIVNVVMVESI
Sbjct: 126 ASSVKSTHCIHAEAVCITSVHGRNGVIDYTIFFTLDSVKLPDGYVPQVDDIVNVVMVESI 185

Query: 226 QFCFKWRAVSITPVQKS 242
           QFCF WRA+SITPV KS
Sbjct: 186 QFCFIWRAISITPVHKS 202



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 33/121 (27%), Positives = 47/121 (38%), Gaps = 15/121 (12%)

Query: 28  GLPEGDTQLTTVQGVVTSFCGDYGVIDESIYFSSDVVTGN-VPLKVGQKVNVVVEEDKIL 86
           G    D+    + G VTS C D   I   IYF  D+V+ + VP K G  + V    +   
Sbjct: 63  GAGPSDSGTRVLIGCVTSICEDIIYISNCIYFFIDIVSEDFVPYK-GNWLKVEYSTEPGF 121

Query: 87  YGLRAIKVDVVPHPLNDDGPSDSKIRVLNGCVTSISEDTVYISNIIYFPMDIVS--EDFV 144
              +A  V            S   I     C+TS+      I   I+F +D V   + +V
Sbjct: 122 SNFKASSV-----------KSTHCIHAEAVCITSVHGRNGVIDYTIFFTLDSVKLPDGYV 170

Query: 145 P 145
           P
Sbjct: 171 P 171


>gi|14251207 MOV10-like 1 [Homo sapiens]
          Length = 1211

 Score =  227 bits (579), Expect = 6e-60
 Identities = 123/247 (49%), Positives = 163/247 (65%), Gaps = 6/247 (2%)

Query: 1   MLRLLRRALAFFHSTAH-PTEQQGPQQQGLPEGDTQLTTVQGVVTSFCGDYGVIDESIYF 59
           ML L  + +AFF  TA  P E+ G  +  L EGDT+L TV+GVVT +C DYG+ID+ IYF
Sbjct: 1   MLSLAAKLVAFFWRTADTPREEAGQLEPELAEGDTKLKTVRGVVTRYCSDYGMIDDMIYF 60

Query: 60  SSDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIKVDVVPHPLNDDG-----PSDSKIRVL 114
           SSD VT  V L VGQ+V  VVEE+K+  GL+AI+V+ V     DD      PSD   RVL
Sbjct: 61  SSDAVTSRVLLNVGQEVIAVVEENKVSNGLKAIRVEAVSDKWEDDSRNHGSPSDCGPRVL 120

Query: 115 NGCVTSISEDTVYISNIIYFPMDIVSEDFVPYKGNWLKVEYSTEPGFLNFKASSVKPTRC 174
            GCVTS+ E    IS   YF ++ V E F P KG+W++ EY   PG  + +A+SVKP R 
Sbjct: 121 IGCVTSLVEGAGCISQTTYFSLESVCEGFEPCKGDWVEAEYRIRPGTWSSEATSVKPLRY 180

Query: 175 IHAEAVRITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCFKWRAV 234
              + V I+ + GR+GV++ +IFFTLDS+KLPDGY P+  D+VN V+VES Q C+ WRA+
Sbjct: 181 KRVDKVCISSLCGRNGVLEESIFFTLDSLKLPDGYTPRRGDVVNAVVVESSQSCYVWRAL 240

Query: 235 SITPVQK 241
            +T V++
Sbjct: 241 CMTLVKR 247


>gi|40548408 p30 DBC protein [Homo sapiens]
          Length = 923

 Score = 36.6 bits (83), Expect = 0.020
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 31 EGDTQLTTVQGVVTSFCGDYGVIDESIYFSSDVVTGNVPLKVGQKVNV 78
          +G  +     G+VTS    +GV+DE ++F   VV G +P ++G+KV V
Sbjct: 50 QGGEKQRVFTGIVTSLHDYFGVVDEEVFFQLSVVKGRLP-QLGEKVLV 96


>gi|24432106 p30 DBC protein [Homo sapiens]
          Length = 923

 Score = 36.6 bits (83), Expect = 0.020
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 31 EGDTQLTTVQGVVTSFCGDYGVIDESIYFSSDVVTGNVPLKVGQKVNV 78
          +G  +     G+VTS    +GV+DE ++F   VV G +P ++G+KV V
Sbjct: 50 QGGEKQRVFTGIVTSLHDYFGVVDEEVFFQLSVVKGRLP-QLGEKVLV 96


>gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo
           sapiens]
          Length = 1150

 Score = 35.0 bits (79), Expect = 0.059
 Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 12/73 (16%)

Query: 14  STAHPTEQ--------QGPQQQGLPEGDTQLTTVQGVVTSFCGDYGVIDESIYFSSDVVT 65
           ST  PT Q        +  QQQ  P+     T   GVVT     +G +DE ++F    V 
Sbjct: 120 STPQPTAQITVSYPTPRSSQQQTQPQKQRVFT---GVVTKLHDTFGFVDEDVFFQLSAVK 176

Query: 66  GNVPLKVGQKVNV 78
           G  P +VG +V V
Sbjct: 177 GKTP-QVGDRVLV 188



 Score = 31.2 bits (69), Expect = 0.85
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 182 ITHIRGRSGVIKNTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCFKWRAVSI 236
           +T +    G +   +FF L +VK   G  PQV D V V    +    FKW A  I
Sbjct: 154 VTKLHDTFGFVDEDVFFQLSAVK---GKTPQVGDRVLVEATYNPNMPFKWNAQRI 205


>gi|132814467 glutamyl aminopeptidase [Homo sapiens]
          Length = 957

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 12/34 (35%), Positives = 23/34 (67%)

Query: 60  SSDVVTGNVPLKVGQKVNVVVEEDKILYGLRAIK 93
           S + ++ N  L+  QK ++  E++K+LYGL ++K
Sbjct: 794 SGNEISWNYTLEQYQKTSLAQEKEKLLYGLASVK 827


>gi|227499621 solute carrier family 27 (fatty acid transporter),
           member 2 isoform 2 [Homo sapiens]
          Length = 567

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 3/36 (8%)

Query: 191 VIKNTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQ 226
           VIK+ ++F  D+ K+   YVP  +DI N +  ++++
Sbjct: 534 VIKDALYFLDDTAKM---YVPMTEDIYNAISAKTLK 566


>gi|227499619 solute carrier family 27 (fatty acid transporter),
           member 2 isoform 1 [Homo sapiens]
          Length = 620

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 3/36 (8%)

Query: 191 VIKNTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQ 226
           VIK+ ++F  D+ K+   YVP  +DI N +  ++++
Sbjct: 587 VIKDALYFLDDTAKM---YVPMTEDIYNAISAKTLK 619


>gi|6005824 Sec23-interacting protein p125 [Homo sapiens]
          Length = 1000

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 188 RSGVIKNTIFFTLDSVKLPDGYVPQVDDIVNVV 220
           R  V+K  I   LD +  PDG +PQVD +V VV
Sbjct: 420 RPRVVKRGIDDNLDEI--PDGEMPQVDHLVFVV 450


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,058,396
Number of Sequences: 37866
Number of extensions: 389179
Number of successful extensions: 670
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 634
Number of HSP's gapped (non-prelim): 20
length of query: 242
length of database: 18,247,518
effective HSP length: 99
effective length of query: 143
effective length of database: 14,498,784
effective search space: 2073326112
effective search space used: 2073326112
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.