Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 117190324
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|117190324 diphthine synthase isoform b [Homo sapiens]
(284 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|117190324 diphthine synthase isoform b [Homo sapiens] 563 e-161
gi|117190326 diphthine synthase isoform a [Homo sapiens] 558 e-159
gi|117190262 diphthine synthase isoform a [Homo sapiens] 558 e-159
gi|38504671 secernin 3 [Homo sapiens] 31 1.1
gi|83776596 CaM kinase-like vesicle-associated [Homo sapiens] 31 1.4
gi|226874833 guanylate kinase 1 isoform b [Homo sapiens] 31 1.4
gi|226874831 guanylate kinase 1 isoform a [Homo sapiens] 31 1.4
gi|4504221 guanylate kinase 1 isoform b [Homo sapiens] 31 1.4
gi|194097432 hypothetical protein LOC285966 B [Homo sapiens] 30 2.4
gi|194097428 hypothetical protein LOC285966 A [Homo sapiens] 30 2.4
gi|194097425 hypothetical protein LOC285966 A [Homo sapiens] 30 2.4
gi|62953116 BTB (POZ) domain containing 11 isoform b [Homo sapiens] 28 9.1
gi|65786661 BTB (POZ) domain containing 11 isoform a [Homo sapiens] 28 9.1
>gi|117190324 diphthine synthase isoform b [Homo sapiens]
Length = 284
Score = 563 bits (1450), Expect = e-161
Identities = 284/284 (100%), Positives = 284/284 (100%)
Query: 1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE 60
MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE
Sbjct: 1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE 60
Query: 61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC 120
VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC
Sbjct: 61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC 120
Query: 121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180
GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK
Sbjct: 121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180
Query: 181 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEPVTEETLCVGLARVGADDQKIAAGTLRQMC 240
IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEPVTEETLCVGLARVGADDQKIAAGTLRQMC
Sbjct: 181 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEPVTEETLCVGLARVGADDQKIAAGTLRQMC 240
Query: 241 TVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL 284
TVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL
Sbjct: 241 TVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL 284
>gi|117190326 diphthine synthase isoform a [Homo sapiens]
Length = 285
Score = 558 bits (1438), Expect = e-159
Identities = 284/285 (99%), Positives = 284/285 (99%), Gaps = 1/285 (0%)
Query: 1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE 60
MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE
Sbjct: 1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE 60
Query: 61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC 120
VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC
Sbjct: 61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC 120
Query: 121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180
GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK
Sbjct: 121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180
Query: 181 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEP-VTEETLCVGLARVGADDQKIAAGTLRQM 239
IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEP VTEETLCVGLARVGADDQKIAAGTLRQM
Sbjct: 181 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEPAVTEETLCVGLARVGADDQKIAAGTLRQM 240
Query: 240 CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL 284
CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL
Sbjct: 241 CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL 285
>gi|117190262 diphthine synthase isoform a [Homo sapiens]
Length = 285
Score = 558 bits (1438), Expect = e-159
Identities = 284/285 (99%), Positives = 284/285 (99%), Gaps = 1/285 (0%)
Query: 1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE 60
MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE
Sbjct: 1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE 60
Query: 61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC 120
VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC
Sbjct: 61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC 120
Query: 121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180
GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK
Sbjct: 121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180
Query: 181 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEP-VTEETLCVGLARVGADDQKIAAGTLRQM 239
IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEP VTEETLCVGLARVGADDQKIAAGTLRQM
Sbjct: 181 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEPAVTEETLCVGLARVGADDQKIAAGTLRQM 240
Query: 240 CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL 284
CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL
Sbjct: 241 CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL 285
>gi|38504671 secernin 3 [Homo sapiens]
Length = 424
Score = 31.2 bits (69), Expect = 1.1
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 158 HTLCLLDIKVKEQSLENLIKGRKIYEPPRYMSVNQAAQQLLEIVQN 203
H LLD LE+L+K + ++P R + Q QQ LE+V N
Sbjct: 317 HISQLLDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNN 362
>gi|83776596 CaM kinase-like vesicle-associated [Homo sapiens]
Length = 501
Score = 30.8 bits (68), Expect = 1.4
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 16/86 (18%)
Query: 166 KVKEQSLENLIKG--RKI------YEPPRYMSVNQAAQ----QLLEIVQNQRIRGEEPVT 213
+V+E EN K RKI ++ P + ++QAA+ +L+E+ Q+QRI EE ++
Sbjct: 223 EVEEDDYENHDKNLFRKILAGDYEFDSPYWDDISQAAKDLVTRLMEVEQDQRITAEEAIS 282
Query: 214 EETLCVGLARVGADDQKIAAGTLRQM 239
E ++ A D+ I G Q+
Sbjct: 283 HE----WISGNAASDKNIKDGVCAQI 304
>gi|226874833 guanylate kinase 1 isoform b [Homo sapiens]
Length = 197
Score = 30.8 bits (68), Expect = 1.4
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 148 KVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRKIYEPPRYMSVNQAAQQLLEIVQNQRIR 207
KV M+ +C+LD+ + Q + N IK + P Y+SV + +LE QR+R
Sbjct: 85 KVAVQAVQAMNRICVLDVDL--QGVRN-IKATDLR--PIYISVQPPSLHVLE----QRLR 135
Query: 208 GEEPVTEETLCVGLARVGAD 227
TEE+L LA AD
Sbjct: 136 QRNTETEESLVKRLAAAQAD 155
>gi|226874831 guanylate kinase 1 isoform a [Homo sapiens]
Length = 218
Score = 30.8 bits (68), Expect = 1.4
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 148 KVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRKIYEPPRYMSVNQAAQQLLEIVQNQRIR 207
KV M+ +C+LD+ + Q + N IK + P Y+SV + +LE QR+R
Sbjct: 106 KVAVQAVQAMNRICVLDVDL--QGVRN-IKATDLR--PIYISVQPPSLHVLE----QRLR 156
Query: 208 GEEPVTEETLCVGLARVGAD 227
TEE+L LA AD
Sbjct: 157 QRNTETEESLVKRLAAAQAD 176
>gi|4504221 guanylate kinase 1 isoform b [Homo sapiens]
Length = 197
Score = 30.8 bits (68), Expect = 1.4
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 148 KVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRKIYEPPRYMSVNQAAQQLLEIVQNQRIR 207
KV M+ +C+LD+ + Q + N IK + P Y+SV + +LE QR+R
Sbjct: 85 KVAVQAVQAMNRICVLDVDL--QGVRN-IKATDLR--PIYISVQPPSLHVLE----QRLR 135
Query: 208 GEEPVTEETLCVGLARVGAD 227
TEE+L LA AD
Sbjct: 136 QRNTETEESLVKRLAAAQAD 155
>gi|194097432 hypothetical protein LOC285966 B [Homo sapiens]
Length = 564
Score = 30.0 bits (66), Expect = 2.4
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 185 PRYMSVNQAAQQLLEIVQNQRIRGEEPVTEET-------LCVGLARVGADDQKIAAGTLR 237
P Y+S+++ +++L + E PV ++ L GLA G D ++A G
Sbjct: 175 PAYISLHRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGT 234
Query: 238 QMCTVDLGEPLHSLIITGGSIHP 260
C+ L H + + I+P
Sbjct: 235 WTCSSSLYPSKHPITVEINGINP 257
>gi|194097428 hypothetical protein LOC285966 A [Homo sapiens]
Length = 845
Score = 30.0 bits (66), Expect = 2.4
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 185 PRYMSVNQAAQQLLEIVQNQRIRGEEPVTEET-------LCVGLARVGADDQKIAAGTLR 237
P Y+S+++ +++L + E PV ++ L GLA G D ++A G
Sbjct: 456 PAYISLHRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGT 515
Query: 238 QMCTVDLGEPLHSLIITGGSIHP 260
C+ L H + + I+P
Sbjct: 516 WTCSSSLYPSKHPITVEINGINP 538
>gi|194097425 hypothetical protein LOC285966 A [Homo sapiens]
Length = 845
Score = 30.0 bits (66), Expect = 2.4
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 185 PRYMSVNQAAQQLLEIVQNQRIRGEEPVTEET-------LCVGLARVGADDQKIAAGTLR 237
P Y+S+++ +++L + E PV ++ L GLA G D ++A G
Sbjct: 456 PAYISLHRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGT 515
Query: 238 QMCTVDLGEPLHSLIITGGSIHP 260
C+ L H + + I+P
Sbjct: 516 WTCSSSLYPSKHPITVEINGINP 538
>gi|62953116 BTB (POZ) domain containing 11 isoform b [Homo sapiens]
Length = 641
Score = 28.1 bits (61), Expect = 9.1
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 52 KLVVADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRAT 99
KL R++ + + L + ++SDV FLV G PF A H L+ A+
Sbjct: 437 KLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYA--HKVLLFTAS 482
>gi|65786661 BTB (POZ) domain containing 11 isoform a [Homo sapiens]
Length = 1104
Score = 28.1 bits (61), Expect = 9.1
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 52 KLVVADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRAT 99
KL R++ + + L + ++SDV FLV G PF A H L+ A+
Sbjct: 900 KLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYA--HKVLLFTAS 945
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,812,554
Number of Sequences: 37866
Number of extensions: 397235
Number of successful extensions: 884
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 876
Number of HSP's gapped (non-prelim): 15
length of query: 284
length of database: 18,247,518
effective HSP length: 101
effective length of query: 183
effective length of database: 14,423,052
effective search space: 2639418516
effective search space used: 2639418516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.