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Search of human proteins with 239745620
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745620 PREDICTED: hypothetical protein XP_002344158 [Homo
sapiens]
(345 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751129 PREDICTED: hypothetical protein XP_002347726 [Homo ... 728 0.0
gi|239745620 PREDICTED: hypothetical protein XP_002344158 [Homo ... 728 0.0
gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo ... 110 2e-24
gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo sapi... 107 1e-23
gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo sapi... 107 1e-23
gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo ... 107 1e-23
gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo sapi... 107 1e-23
gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo sapi... 107 1e-23
gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens] 107 1e-23
gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens] 107 1e-23
gi|194272172 double homeobox, 4 [Homo sapiens] 107 1e-23
gi|194272217 double homeobox, 4-like [Homo sapiens] 107 1e-23
gi|194272216 double homeobox, 4-like [Homo sapiens] 107 1e-23
gi|194272215 double homeobox, 4-like [Homo sapiens] 107 1e-23
gi|194272192 double homeobox, 4-like [Homo sapiens] 107 1e-23
gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo sapi... 106 3e-23
gi|61969662 double homeobox A [Homo sapiens] 105 5e-23
gi|239758001 PREDICTED: similar to facioscapulohumeral muscular ... 100 1e-21
gi|207442670 double homeobox, 5 [Homo sapiens] 98 1e-20
gi|11120736 double homeobox, 1 [Homo sapiens] 98 1e-20
gi|207442678 double homeobox, 3 [Homo sapiens] 97 2e-20
gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo sapi... 96 6e-20
gi|239758067 PREDICTED: similar to facioscapulohumeral muscular ... 94 2e-19
gi|169217788 PREDICTED: similar to putative DUX4 protein [Homo s... 94 2e-19
gi|89062404 PREDICTED: similar to putative DUX4 protein [Homo sa... 93 4e-19
gi|239752536 PREDICTED: hypothetical protein XP_002346688 [Homo ... 92 5e-19
gi|239752515 PREDICTED: similar to double homeobox, 4 [Homo sapi... 90 3e-18
gi|239758111 PREDICTED: similar to facioscapulohumeral muscular ... 63 4e-10
gi|239752588 PREDICTED: hypothetical protein XP_002348309, parti... 62 8e-10
gi|7706659 paired related homeobox 2 [Homo sapiens] 61 1e-09
>gi|239751129 PREDICTED: hypothetical protein XP_002347726 [Homo
sapiens]
Length = 345
Score = 728 bits (1879), Expect = 0.0
Identities = 345/345 (100%), Positives = 345/345 (100%)
Query: 1 MNLEGTSGGILQKEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQ 60
MNLEGTSGGILQKEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQ
Sbjct: 1 MNLEGTSGGILQKEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQ 60
Query: 61 VWFKNYRVKQRKLDYKCFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQA 120
VWFKNYRVKQRKLDYKCFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQA
Sbjct: 61 VWFKNYRVKQRKLDYKCFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQA 120
Query: 121 FERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYLKKSRMEPMNLLVDDPNERPDAT 180
FERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYLKKSRMEPMNLLVDDPNERPDAT
Sbjct: 121 FERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYLKKSRMEPMNLLVDDPNERPDAT 180
Query: 181 VGWHPINLFLPTDSSHYFSCSHSSSGHETLPPVLPSTQAPWDPFRFHVSQGPNVMIMQPT 240
VGWHPINLFLPTDSSHYFSCSHSSSGHETLPPVLPSTQAPWDPFRFHVSQGPNVMIMQPT
Sbjct: 181 VGWHPINLFLPTDSSHYFSCSHSSSGHETLPPVLPSTQAPWDPFRFHVSQGPNVMIMQPT 240
Query: 241 QAVQEGEKSDQPLIIPNHLLTLPILTKDLDTPTPFWLQYQEEHQNHKEHSGSGVPQVKSH 300
QAVQEGEKSDQPLIIPNHLLTLPILTKDLDTPTPFWLQYQEEHQNHKEHSGSGVPQVKSH
Sbjct: 241 QAVQEGEKSDQPLIIPNHLLTLPILTKDLDTPTPFWLQYQEEHQNHKEHSGSGVPQVKSH 300
Query: 301 SQPEPEHREQQPLNLGQFDISNILQRWDEICQALLAEWDPLKGTH 345
SQPEPEHREQQPLNLGQFDISNILQRWDEICQALLAEWDPLKGTH
Sbjct: 301 SQPEPEHREQQPLNLGQFDISNILQRWDEICQALLAEWDPLKGTH 345
>gi|239745620 PREDICTED: hypothetical protein XP_002344158 [Homo
sapiens]
Length = 345
Score = 728 bits (1879), Expect = 0.0
Identities = 345/345 (100%), Positives = 345/345 (100%)
Query: 1 MNLEGTSGGILQKEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQ 60
MNLEGTSGGILQKEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQ
Sbjct: 1 MNLEGTSGGILQKEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQ 60
Query: 61 VWFKNYRVKQRKLDYKCFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQA 120
VWFKNYRVKQRKLDYKCFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQA
Sbjct: 61 VWFKNYRVKQRKLDYKCFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQA 120
Query: 121 FERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYLKKSRMEPMNLLVDDPNERPDAT 180
FERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYLKKSRMEPMNLLVDDPNERPDAT
Sbjct: 121 FERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYLKKSRMEPMNLLVDDPNERPDAT 180
Query: 181 VGWHPINLFLPTDSSHYFSCSHSSSGHETLPPVLPSTQAPWDPFRFHVSQGPNVMIMQPT 240
VGWHPINLFLPTDSSHYFSCSHSSSGHETLPPVLPSTQAPWDPFRFHVSQGPNVMIMQPT
Sbjct: 181 VGWHPINLFLPTDSSHYFSCSHSSSGHETLPPVLPSTQAPWDPFRFHVSQGPNVMIMQPT 240
Query: 241 QAVQEGEKSDQPLIIPNHLLTLPILTKDLDTPTPFWLQYQEEHQNHKEHSGSGVPQVKSH 300
QAVQEGEKSDQPLIIPNHLLTLPILTKDLDTPTPFWLQYQEEHQNHKEHSGSGVPQVKSH
Sbjct: 241 QAVQEGEKSDQPLIIPNHLLTLPILTKDLDTPTPFWLQYQEEHQNHKEHSGSGVPQVKSH 300
Query: 301 SQPEPEHREQQPLNLGQFDISNILQRWDEICQALLAEWDPLKGTH 345
SQPEPEHREQQPLNLGQFDISNILQRWDEICQALLAEWDPLKGTH
Sbjct: 301 SQPEPEHREQQPLNLGQFDISNILQRWDEICQALLAEWDPLKGTH 345
>gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo
sapiens]
Length = 381
Score = 110 bits (274), Expect = 2e-24
Identities = 81/252 (32%), Positives = 128/252 (50%), Gaps = 34/252 (13%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ ++L++ F+ +P+P A RE+LA+ IG+PE +Q+WF+N R +Q +
Sbjct: 159 RRRLVWTPSQSEVLRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---- 214
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ +E R+K+T +T +Q L++AFE++ FP IA R++LA
Sbjct: 215 --------QHRRESRPWPGRRGLQEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 266
Query: 137 EQTGLQESRIQMWFQKQRSLYLKKSRMEPMNLLVDDPNERPDATVGWHPINLFLPTDSSH 196
+TGL ESRIQ+WFQ +R+ + + P + A G HP +
Sbjct: 267 RETGLPESRIQIWFQNRRARHPGQGGRAPAHA----GGLCNAAPSGCHP--------APS 314
Query: 197 YFSCSHSSSGHETLP----PVLPSTQAPWDPFRFHVSQGPN-VMIMQPTQAVQEGEKSDQ 251
+ +C+H+ + LP P P P F SQG V ++QP+QA E Q
Sbjct: 315 WVACAHTGAWGTGLPASHVPCAPGA-LPQGAFG---SQGARAVPVLQPSQAA-PAEGISQ 369
Query: 252 PLIIPNHLLTLP 263
P L +LP
Sbjct: 370 PAPALGTLCSLP 381
Score = 62.0 bits (149), Expect = 8e-10
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 98 LPKEARQKQTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRS 155
L R ++ + WT Q L FERNP+P IATR++LA+ G+ E R+Q+WFQ +RS
Sbjct: 151 LTSRGRGRRRRLVWTPSQSEVLRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERS 210
Query: 156 LYLKKSRME 164
L++ R E
Sbjct: 211 RQLRQHRRE 219
>gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 107 bits (268), Expect = 1e-23
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 12/139 (8%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+PE +Q+WF+N R +Q +
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---- 137
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ P E R+K+T +T +Q L++AFE++ FP IA R++LA
Sbjct: 138 --------QHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 137 EQTGLQESRIQMWFQKQRS 155
+TGL ESRIQ+WFQ +R+
Sbjct: 190 RETGLPESRIQIWFQNRRA 208
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 98 LPKEARQK--QTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP EAR + + + WT Q L FERNP+P IATR++LA+ G+ E R+Q+WFQ +
Sbjct: 72 LPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNE 131
Query: 154 RSLYLKKSRME 164
RS L++ R E
Sbjct: 132 RSRQLRQHRRE 142
Score = 54.3 bits (129), Expect = 2e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R R SQ +L F+ D FP AARE+LA+E G+PES IQ+WF+N R +
Sbjct: 157 RKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 107 bits (268), Expect = 1e-23
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 12/139 (8%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+PE +Q+WF+N R +Q +
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---- 137
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ P E R+K+T +T +Q L++AFE++ FP IA R++LA
Sbjct: 138 --------QHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 137 EQTGLQESRIQMWFQKQRS 155
+TGL ESRIQ+WFQ +R+
Sbjct: 190 RETGLPESRIQIWFQNRRA 208
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 98 LPKEARQK--QTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP EAR + + + WT Q L FERNP+P IATR++LA+ G+ E R+Q+WFQ +
Sbjct: 72 LPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNE 131
Query: 154 RSLYLKKSRME 164
RS L++ R E
Sbjct: 132 RSRQLRQHRRE 142
Score = 54.3 bits (129), Expect = 2e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R R SQ +L F+ D FP AARE+LA+E G+PES IQ+WF+N R +
Sbjct: 157 RKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo
sapiens]
Length = 483
Score = 107 bits (268), Expect = 1e-23
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 12/139 (8%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+PE +Q+WF+N R +Q +
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---- 137
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ P E R+K+T +T +Q L++AFE++ FP IA R++LA
Sbjct: 138 --------QHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 137 EQTGLQESRIQMWFQKQRS 155
+TGL ESRIQ+WFQ +R+
Sbjct: 190 RETGLPESRIQIWFQNRRA 208
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 98 LPKEARQK--QTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP EAR + + + WT Q L FERNP+P IATR++LA+ G+ E R+Q+WFQ +
Sbjct: 72 LPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNE 131
Query: 154 RSLYLKKSRME 164
RS L++ R E
Sbjct: 132 RSRQLRQHRRE 142
Score = 54.3 bits (129), Expect = 2e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R R SQ +L F+ D FP AARE+LA+E G+PES IQ+WF+N R +
Sbjct: 157 RKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 107 bits (268), Expect = 1e-23
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 12/139 (8%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+PE +Q+WF+N R +Q +
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---- 137
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ P E R+K+T +T +Q L++AFE++ FP IA R++LA
Sbjct: 138 --------QHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 137 EQTGLQESRIQMWFQKQRS 155
+TGL ESRIQ+WFQ +R+
Sbjct: 190 RETGLPESRIQIWFQNRRA 208
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 98 LPKEARQK--QTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP EAR + + + WT Q L FERNP+P IATR++LA+ G+ E R+Q+WFQ +
Sbjct: 72 LPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNE 131
Query: 154 RSLYLKKSRME 164
RS L++ R E
Sbjct: 132 RSRQLRQHRRE 142
Score = 54.3 bits (129), Expect = 2e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R R SQ +L F+ D FP AARE+LA+E G+PES IQ+WF+N R +
Sbjct: 157 RKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 107 bits (268), Expect = 1e-23
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 12/139 (8%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+PE +Q+WF+N R +Q +
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---- 137
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ P E R+K+T +T +Q L++AFE++ FP IA R++LA
Sbjct: 138 --------QHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 137 EQTGLQESRIQMWFQKQRS 155
+TGL ESRIQ+WFQ +R+
Sbjct: 190 RETGLPESRIQIWFQNRRA 208
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 98 LPKEARQK--QTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP EAR + + + WT Q L FERNP+P IATR++LA+ G+ E R+Q+WFQ +
Sbjct: 72 LPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNE 131
Query: 154 RSLYLKKSRME 164
RS L++ R E
Sbjct: 132 RSRQLRQHRRE 142
Score = 54.3 bits (129), Expect = 2e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R R SQ +L F+ D FP AARE+LA+E G+PES IQ+WF+N R +
Sbjct: 157 RKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 107 bits (268), Expect = 1e-23
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 12/139 (8%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+PE +Q+WF+N R +Q +
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---- 137
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ P E R+K+T +T +Q L++AFE++ FP IA R++LA
Sbjct: 138 --------QHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 137 EQTGLQESRIQMWFQKQRS 155
+TGL ESRIQ+WFQ +R+
Sbjct: 190 RETGLPESRIQIWFQNRRA 208
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 98 LPKEARQK--QTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP EAR + + + WT Q L FERNP+P IATR++LA+ G+ E R+Q+WFQ +
Sbjct: 72 LPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNE 131
Query: 154 RSLYLKKSRME 164
RS L++ R E
Sbjct: 132 RSRQLRQHRRE 142
Score = 54.3 bits (129), Expect = 2e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R R SQ +L F+ D FP AARE+LA+E G+PES IQ+WF+N R +
Sbjct: 157 RKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 483
Score = 107 bits (268), Expect = 1e-23
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 12/139 (8%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+PE +Q+WF+N R +Q +
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---- 137
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ P E R+K+T +T +Q L++AFE++ FP IA R++LA
Sbjct: 138 --------QHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 137 EQTGLQESRIQMWFQKQRS 155
+TGL ESRIQ+WFQ +R+
Sbjct: 190 RETGLPESRIQIWFQNRRA 208
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 98 LPKEARQK--QTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP EAR + + + WT Q L FERNP+P IATR++LA+ G+ E R+Q+WFQ +
Sbjct: 72 LPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNE 131
Query: 154 RSLYLKKSRME 164
RS L++ R E
Sbjct: 132 RSRQLRQHRRE 142
Score = 54.3 bits (129), Expect = 2e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R R SQ +L F+ D FP AARE+LA+E G+PES IQ+WF+N R +
Sbjct: 157 RKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>gi|194272172 double homeobox, 4 [Homo sapiens]
Length = 485
Score = 107 bits (268), Expect = 1e-23
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 12/139 (8%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+PE +Q+WF+N R +Q +
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---- 137
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ P E R+K+T +T +Q L++AFE++ FP IA R++LA
Sbjct: 138 --------QHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 137 EQTGLQESRIQMWFQKQRS 155
+TGL ESRIQ+WFQ +R+
Sbjct: 190 RETGLPESRIQIWFQNRRA 208
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 98 LPKEARQK--QTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP EAR + + + WT Q L FERNP+P IATR++LA+ G+ E R+Q+WFQ +
Sbjct: 72 LPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNE 131
Query: 154 RSLYLKKSRME 164
RS L++ R E
Sbjct: 132 RSRQLRQHRRE 142
Score = 54.3 bits (129), Expect = 2e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R R SQ +L F+ D FP AARE+LA+E G+PES IQ+WF+N R +
Sbjct: 157 RKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>gi|194272217 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 107 bits (268), Expect = 1e-23
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 12/139 (8%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+PE +Q+WF+N R +Q +
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---- 137
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ P E R+K+T +T +Q L++AFE++ FP IA R++LA
Sbjct: 138 --------QHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 137 EQTGLQESRIQMWFQKQRS 155
+TGL ESRIQ+WFQ +R+
Sbjct: 190 RETGLPESRIQIWFQNRRA 208
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 98 LPKEARQK--QTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP EAR + + + WT Q L FERNP+P IATR++LA+ G+ E R+Q+WFQ +
Sbjct: 72 LPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNE 131
Query: 154 RSLYLKKSRME 164
RS L++ R E
Sbjct: 132 RSRQLRQHRRE 142
Score = 54.3 bits (129), Expect = 2e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R R SQ +L F+ D FP AARE+LA+E G+PES IQ+WF+N R +
Sbjct: 157 RKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>gi|194272216 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 107 bits (268), Expect = 1e-23
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 12/139 (8%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+PE +Q+WF+N R +Q +
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---- 137
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ P E R+K+T +T +Q L++AFE++ FP IA R++LA
Sbjct: 138 --------QHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 137 EQTGLQESRIQMWFQKQRS 155
+TGL ESRIQ+WFQ +R+
Sbjct: 190 RETGLPESRIQIWFQNRRA 208
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 98 LPKEARQK--QTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP EAR + + + WT Q L FERNP+P IATR++LA+ G+ E R+Q+WFQ +
Sbjct: 72 LPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNE 131
Query: 154 RSLYLKKSRME 164
RS L++ R E
Sbjct: 132 RSRQLRQHRRE 142
Score = 54.3 bits (129), Expect = 2e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R R SQ +L F+ D FP AARE+LA+E G+PES IQ+WF+N R +
Sbjct: 157 RKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>gi|194272215 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 107 bits (268), Expect = 1e-23
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 12/139 (8%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+PE +Q+WF+N R +Q +
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---- 137
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ P E R+K+T +T +Q L++AFE++ FP IA R++LA
Sbjct: 138 --------QHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 137 EQTGLQESRIQMWFQKQRS 155
+TGL ESRIQ+WFQ +R+
Sbjct: 190 RETGLPESRIQIWFQNRRA 208
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 98 LPKEARQK--QTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP EAR + + + WT Q L FERNP+P IATR++LA+ G+ E R+Q+WFQ +
Sbjct: 72 LPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNE 131
Query: 154 RSLYLKKSRME 164
RS L++ R E
Sbjct: 132 RSRQLRQHRRE 142
Score = 54.3 bits (129), Expect = 2e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R R SQ +L F+ D FP AARE+LA+E G+PES IQ+WF+N R +
Sbjct: 157 RKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>gi|194272192 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 107 bits (268), Expect = 1e-23
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 12/139 (8%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+PE +Q+WF+N R +Q +
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---- 137
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ P E R+K+T +T +Q L++AFE++ FP IA R++LA
Sbjct: 138 --------QHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELA 189
Query: 137 EQTGLQESRIQMWFQKQRS 155
+TGL ESRIQ+WFQ +R+
Sbjct: 190 RETGLPESRIQIWFQNRRA 208
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 98 LPKEARQK--QTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP EAR + + + WT Q L FERNP+P IATR++LA+ G+ E R+Q+WFQ +
Sbjct: 72 LPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNE 131
Query: 154 RSLYLKKSRME 164
RS L++ R E
Sbjct: 132 RSRQLRQHRRE 142
Score = 54.3 bits (129), Expect = 2e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R R SQ +L F+ D FP AARE+LA+E G+PES IQ+WF+N R +
Sbjct: 157 RKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 106 bits (265), Expect = 3e-23
Identities = 55/139 (39%), Positives = 86/139 (61%), Gaps = 12/139 (8%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+PE +Q+WF+N R +Q +
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLR---- 137
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ P E R+K+T +T Q L++AFE++ FP IA R++LA
Sbjct: 138 --------QHRRESRPWPGRRGPPEGRRKRTAVTGFQTALLLRAFEKDRFPGIAAREELA 189
Query: 137 EQTGLQESRIQMWFQKQRS 155
+TGL ESRIQ+WFQ +R+
Sbjct: 190 RETGLPESRIQIWFQNRRA 208
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 98 LPKEARQK--QTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP EAR + + + WT Q L FERNP+P IATR++LA+ G+ E R+Q+WFQ +
Sbjct: 72 LPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNE 131
Query: 154 RSLYLKKSRME 164
RS L++ R E
Sbjct: 132 RSRQLRQHRRE 142
Score = 52.0 bits (123), Expect = 8e-07
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R R Q +L F+ D FP AARE+LA+E G+PES IQ+WF+N R +
Sbjct: 157 RKRTAVTGFQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>gi|61969662 double homeobox A [Homo sapiens]
Length = 204
Score = 105 bits (263), Expect = 5e-23
Identities = 60/170 (35%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK---QRKL 73
R R ++ + Q IL + F P+P A +++LA EI ES IQ+WF+N R + Q++
Sbjct: 17 RCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKRP 76
Query: 74 DYKCFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRK 133
+ + E Q+QG DQ E+ +EAR+ +T + +Q + L++AF +NP+P I +R+
Sbjct: 77 EAETL-ESSQSQGQDQPG---VEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSRE 132
Query: 134 KLAEQTGLQESRIQMWFQKQRSLYLKKSRMEPM-NLLVDDPNERPDATVG 182
+LA++ G+ ESR+Q+WFQ +RS L + + EP+ +L ++ + P+ G
Sbjct: 133 ELAKEIGVPESRVQIWFQNRRSRLLLQRKREPVASLEQEEQGKIPEGLQG 182
Score = 56.6 bits (135), Expect = 3e-08
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 13 KEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK--- 69
+E R R Y+ SQ L F +P+P +RE+LAKEIGVPES +Q+WF+N R +
Sbjct: 99 REARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELAKEIGVPESRVQIWFQNRRSRLLL 158
Query: 70 QRKLDYKCFSEKDQ 83
QRK + E+++
Sbjct: 159 QRKREPVASLEQEE 172
Score = 49.3 bits (116), Expect = 5e-06
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 103 RQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYLKKSR 162
R+ +T T Q L+ F + P+P AT++KLA + +ESRIQ+WFQ +R+ + + R
Sbjct: 16 RRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKR 75
Query: 163 MEPMNL 168
E L
Sbjct: 76 PEAETL 81
>gi|239758001 PREDICTED: similar to facioscapulohumeral muscular
dystrophy [Homo sapiens]
Length = 300
Score = 100 bits (250), Expect = 1e-21
Identities = 56/153 (36%), Positives = 88/153 (57%), Gaps = 12/153 (7%)
Query: 3 LEGTSGGILQKEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVW 62
L+GT Q R RI + SQ++ L++ F+ +P+ REQLA+ IG+ E +Q+W
Sbjct: 101 LDGTHTAEAQGRGRRRRIVWTPSQREALRACFERNPYLGITTREQLAQAIGILEPRVQIW 160
Query: 63 FKNYRVKQRKLDYKCFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFE 122
F+N R Q + Q +S+ + P E R+KQT +T +Q ++AFE
Sbjct: 161 FQNERSSQLR------------QHRQKSRPWPGRHGPPEGRRKQTTVTGSQTALFLRAFE 208
Query: 123 RNPFPDIATRKKLAEQTGLQESRIQMWFQKQRS 155
++ FP IA +++LA +T L ESRIQ+WFQ +R+
Sbjct: 209 KDRFPGIAAKEELARETVLPESRIQIWFQNRRA 241
Score = 56.6 bits (135), Expect = 3e-08
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 101 EARQKQTFITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYL 158
+ R ++ I WT Q+ L FERNP+ I TR++LA+ G+ E R+Q+WFQ +RS L
Sbjct: 110 QGRGRRRRIVWTPSQREALRACFERNPYLGITTREQLAQAIGILEPRVQIWFQNERSSQL 169
Query: 159 KKSRME 164
++ R +
Sbjct: 170 RQHRQK 175
Score = 46.6 bits (109), Expect = 3e-05
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R + SQ + F+ D FP AA+E+LA+E +PES IQ+WF+N R +
Sbjct: 190 RKQTTVTGSQTALFLRAFEKDRFPGIAAKEELARETVLPESRIQIWFQNRRAR 242
>gi|207442670 double homeobox, 5 [Homo sapiens]
Length = 197
Score = 97.8 bits (242), Expect = 1e-20
Identities = 54/141 (38%), Positives = 85/141 (60%), Gaps = 12/141 (8%)
Query: 25 SQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYKCFSEKDQT 84
SQ D L++ F+ + +P A +E+LA+ I +PE +Q+WF+N R Q +
Sbjct: 56 SQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNERSCQLR------------ 103
Query: 85 QGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQES 144
Q QS+ P++ R+K+T IT +Q L++AFE++ FP IA R++LA +TGL ES
Sbjct: 104 QHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPES 163
Query: 145 RIQMWFQKQRSLYLKKSRMEP 165
RIQ+WFQ +R+ + +S P
Sbjct: 164 RIQIWFQNRRARHRGQSGRAP 184
Score = 56.2 bits (134), Expect = 4e-08
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQR 71
R R SQ +L F+ D FP AARE+LA+E G+PES IQ+WF+N R + R
Sbjct: 123 RKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHR 177
Score = 52.8 bits (125), Expect = 5e-07
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 98 LPKEA----RQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP+EA R+ T +Q + L FERN +P IAT+++LA+ + E R+Q+WFQ +
Sbjct: 38 LPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNE 97
Query: 154 RSLYLKKSRME 164
RS L++ R +
Sbjct: 98 RSCQLRQHRRQ 108
>gi|11120736 double homeobox, 1 [Homo sapiens]
Length = 170
Score = 97.8 bits (242), Expect = 1e-20
Identities = 54/141 (38%), Positives = 85/141 (60%), Gaps = 12/141 (8%)
Query: 25 SQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYKCFSEKDQT 84
SQ D L++ F+ + +P A +E+LA+ I +PE +Q+WF+N R Q +
Sbjct: 29 SQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNERSCQLR------------ 76
Query: 85 QGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQES 144
Q QS+ P++ R+K+T IT +Q L++AFE++ FP IA R++LA +TGL ES
Sbjct: 77 QHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPES 136
Query: 145 RIQMWFQKQRSLYLKKSRMEP 165
RIQ+WFQ +R+ + +S P
Sbjct: 137 RIQIWFQNRRARHRGQSGRAP 157
Score = 56.2 bits (134), Expect = 4e-08
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQR 71
R R SQ +L F+ D FP AARE+LA+E G+PES IQ+WF+N R + R
Sbjct: 96 RKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHR 150
Score = 52.8 bits (125), Expect = 5e-07
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 98 LPKEA----RQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP+EA R+ T +Q + L FERN +P IAT+++LA+ + E R+Q+WFQ +
Sbjct: 11 LPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNE 70
Query: 154 RSLYLKKSRME 164
RS L++ R +
Sbjct: 71 RSCQLRQHRRQ 81
>gi|207442678 double homeobox, 3 [Homo sapiens]
Length = 197
Score = 97.4 bits (241), Expect = 2e-20
Identities = 54/141 (38%), Positives = 84/141 (59%), Gaps = 12/141 (8%)
Query: 25 SQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYKCFSEKDQT 84
SQ D L++ F+ + +P A +EQLA+ I +PE +Q+WF+N R Q +
Sbjct: 56 SQSDALRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLR------------ 103
Query: 85 QGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQES 144
Q QS+ P++ R+K+T IT +Q L++AFE++ FP I R++LA +TGL ES
Sbjct: 104 QHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPES 163
Query: 145 RIQMWFQKQRSLYLKKSRMEP 165
RIQ+WFQ +R+ + +S P
Sbjct: 164 RIQLWFQNRRARHWGQSGRAP 184
Score = 52.8 bits (125), Expect = 5e-07
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 98 LPKEA----RQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP+EA R+ T +Q + L FERN +P IAT+++LA+ + E R+Q+WFQ +
Sbjct: 38 LPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNE 97
Query: 154 RSLYLKKSRME 164
RS L++ R +
Sbjct: 98 RSCQLRQHRRQ 108
Score = 51.6 bits (122), Expect = 1e-06
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
R R SQ +L F+ D FP ARE+LA+E G+PES IQ+WF+N R +
Sbjct: 123 RKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRAR 175
>gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 422
Score = 95.5 bits (236), Expect = 6e-20
Identities = 57/169 (33%), Positives = 93/169 (55%), Gaps = 16/169 (9%)
Query: 1 MNLEGTSGGILQKEFW----RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPE 56
M L S G L E W R R+ ++ + L + + +P+ A RE+L + I +PE
Sbjct: 1 MALPTPSDGTLPAEAWGRGRRRRLVWSPXESQALGASVEQNPYLGIATRERLTRAIVIPE 60
Query: 57 SNIQVWFKNYRVKQRKLDYKCFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNR 116
S +Q+ F+N R +Q + Q +S+ + P+E R+K+T +T +Q
Sbjct: 61 SRVQICFQNERSRQLR------------QHRWESRPRPRRCAPQEGRRKRTAVTGSQTTL 108
Query: 117 LVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYLKKSRMEP 165
L++AFE++ FP IATR++LA +TGL SRIQMWF +R+ + ++ P
Sbjct: 109 LLRAFEKDRFPGIATREELARETGLPASRIQMWFPNRRARHPGQAARAP 157
>gi|239758067 PREDICTED: similar to facioscapulohumeral muscular
dystrophy [Homo sapiens]
Length = 468
Score = 93.6 bits (231), Expect = 2e-19
Identities = 53/152 (34%), Positives = 85/152 (55%), Gaps = 12/152 (7%)
Query: 4 EGTSGGILQKEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWF 63
+GT Q R RI + SQ++ L++ F+ +P+ REQLA+ IG+ E + +WF
Sbjct: 102 DGTHTAEAQGSGRRRRIVWTPSQREALRACFERNPYLGITTREQLAQAIGILEPRVPIWF 161
Query: 64 KNYRVKQRKLDYKCFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFER 123
+N R Q + Q +S+ + P E R K+T +T +Q ++AFE+
Sbjct: 162 QNERSSQLR------------QHRRKSRPWPGRHGPPEGRGKRTAVTGSQTALFLRAFEK 209
Query: 124 NPFPDIATRKKLAEQTGLQESRIQMWFQKQRS 155
+ FP IA +++LA +T L ESRIQ+WFQ +R+
Sbjct: 210 DRFPGIAAKEELARETVLPESRIQIWFQNRRA 241
Score = 52.4 bits (124), Expect = 6e-07
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 109 ITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYLKKSR 162
I WT Q+ L FERNP+ I TR++LA+ G+ E R+ +WFQ +RS L++ R
Sbjct: 118 IVWTPSQREALRACFERNPYLGITTREQLAQAIGILEPRVPIWFQNERSSQLRQHR 173
Score = 46.2 bits (108), Expect = 4e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 25 SQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
SQ + F+ D FP AA+E+LA+E +PES IQ+WF+N R +
Sbjct: 198 SQTALFLRAFEKDRFPGIAAKEELARETVLPESRIQIWFQNRRAR 242
>gi|169217788 PREDICTED: similar to putative DUX4 protein [Homo
sapiens]
Length = 422
Score = 93.6 bits (231), Expect = 2e-19
Identities = 89/336 (26%), Positives = 143/336 (42%), Gaps = 37/336 (11%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + S+ + L++ F+ +P+P +LA+ IG+ E +Q+WF+N R Q D +
Sbjct: 21 RRRLIWTPSKSEALRACFEWNPYPGITTGGRLAQAIGISEPRVQIWFQNERSCQLMQDQR 80
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
E G +Q E R+K T +T +Q +QAFE++ FPDIA R++LA
Sbjct: 81 ---ESWPWPGRCGTQ---------EGRRKPTAVTGSQTALYLQAFEKDRFPDIAAREELA 128
Query: 137 EQTGLQESRIQMWFQKQRSLYLKKSRMEPM---NLLVDDPNERPDATVGWHPINLFLPTD 193
+TGL ESR ++WFQ +R+ + ++ EP L P G HP
Sbjct: 129 RETGLPESRSEIWFQNRRARHPGQAGREPAQAGGLCNVVPG-------GCHP-------- 173
Query: 194 SSHYFSCSHSSSGHETLP-PVLPSTQAPWDPFRFHVSQGPNVMIMQPTQAVQEGEKSDQP 252
+ + + +H+S+ LP P +P F +SQG + + E QP
Sbjct: 174 APSWVAFAHTSAWGTGLPTPYVPGAPGALPQGAF-MSQGARAVPVLQASLAMPAEGISQP 232
Query: 253 LIIPNHLLTLPILTKD--LDTP-TPFWLQYQEEHQNHKEHSGSGVPQVKSHSQPEPEHRE 309
L + L P P W + + + +E G+P + QP P
Sbjct: 233 APARGDFLYATPTPPEGALSHPQAPRWPAHPGKSREDRELQLDGLPGPCTVGQPGPAQAR 292
Query: 310 QQPLNLGQFDIS--NILQRWDEICQALLAEWDPLKG 343
Q + S + W + Q A W+P G
Sbjct: 293 PQGQGVLAIPASQGSPWWGWGQGPQVARAAWEPQAG 328
>gi|89062404 PREDICTED: similar to putative DUX4 protein [Homo
sapiens]
Length = 422
Score = 92.8 bits (229), Expect = 4e-19
Identities = 89/336 (26%), Positives = 142/336 (42%), Gaps = 37/336 (11%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + S+ + L++ F+ +P+P +LA+ IG+ E +Q+WF+N R Q D +
Sbjct: 21 RRRLIWTPSKSEALRACFEWNPYPGITTGGRLAQAIGISEPRVQIWFQNERSCQLMQDQR 80
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
E G +Q E R+K T +T +Q +QAFE++ FPDIA R++LA
Sbjct: 81 ---ESWPWPGRCGTQ---------EGRRKPTAVTGSQTALYLQAFEKDRFPDIAAREELA 128
Query: 137 EQTGLQESRIQMWFQKQRSLYLKKSRMEPM---NLLVDDPNERPDATVGWHPINLFLPTD 193
+TGL ESR ++WFQ +R+ + ++ EP L P G HP
Sbjct: 129 RETGLPESRSEIWFQNRRARHPGQAGREPAQAGGLCNVVPG-------GCHP-------- 173
Query: 194 SSHYFSCSHSSSGHETLP-PVLPSTQAPWDPFRFHVSQGPNVMIMQPTQAVQEGEKSDQP 252
+ + + +H+S+ LP P +P F +SQG + + E QP
Sbjct: 174 APSWVAFAHTSAWGTGLPTPYVPGAPGALPQGAF-MSQGARAVPVLQASLAMPAEGISQP 232
Query: 253 LIIPNHLLTLPILTKD--LDTP-TPFWLQYQEEHQNHKEHSGSGVPQVKSHSQPEPEHRE 309
L + L P P W + + + +E G+P + QP P
Sbjct: 233 APARGDFLYATPTPPEGALSHPQAPRWPAHPGKSREDRELQLDGLPGPCTVGQPGPAQAR 292
Query: 310 QQPLNLGQFDIS--NILQRWDEICQALLAEWDPLKG 343
Q + S + W Q A W+P G
Sbjct: 293 PQGQGVLAIPASQGSPWWGWGRGPQVARAAWEPQAG 328
>gi|239752536 PREDICTED: hypothetical protein XP_002346688 [Homo
sapiens]
Length = 236
Score = 92.4 bits (228), Expect = 5e-19
Identities = 50/139 (35%), Positives = 81/139 (58%), Gaps = 12/139 (8%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R RI + SQ++ L++ F+ +P+ REQLA+ IG+ E + +WF+N R Q +
Sbjct: 59 RRRIVWTPSQREALRACFERNPYLGITTREQLAQAIGILEPRVPIWFQNERSSQLR---- 114
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q +S+ + P E R K+T +T +Q ++AFE++ FP IA +++LA
Sbjct: 115 --------QHRRKSRPWPGRHGPPEGRGKRTAVTGSQTALFLRAFEKDRFPGIAAKEELA 166
Query: 137 EQTGLQESRIQMWFQKQRS 155
+T L ESRIQ+WFQ +R+
Sbjct: 167 RETVLPESRIQIWFQNRRA 185
Score = 52.4 bits (124), Expect = 6e-07
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 109 ITWT--QKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYLKKSR 162
I WT Q+ L FERNP+ I TR++LA+ G+ E R+ +WFQ +RS L++ R
Sbjct: 62 IVWTPSQREALRACFERNPYLGITTREQLAQAIGILEPRVPIWFQNERSSQLRQHR 117
Score = 46.2 bits (108), Expect = 4e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 25 SQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
SQ + F+ D FP AA+E+LA+E +PES IQ+WF+N R +
Sbjct: 142 SQTALFLRAFEKDRFPGIAAKEELARETVLPESRIQIWFQNRRAR 186
>gi|239752515 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 479
Score = 89.7 bits (221), Expect = 3e-18
Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 26/239 (10%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 76
R R+ + SQ LQ+ ++ +P+ A RE+LA+ I + E +Q+WF+N R +Q +
Sbjct: 78 RRRLVWTPSQSXALQACYERNPYLGIATRERLAQAIVILEPRVQIWFQNERSRQLR---- 133
Query: 77 CFSEKDQTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLA 136
Q S+ KE QK+T +T ++ L++AFE++ F IATR++LA
Sbjct: 134 --------QHRRDSRPWPGRRGLKEVWQKRTAVTGSRTYLLLRAFEKDRFTGIATREELA 185
Query: 137 EQTGLQESRIQMWFQKQRSLYLKKSRMEPMNLLVDDPNERPDATVGWHPINLFLPTDSSH 196
+TG ESRIQ+WFQ +R+ + ++ P + A G HP +
Sbjct: 186 RETGTPESRIQIWFQNRRARHPGQAGRVPAHA----GGLYNTAPGGCHP--------APS 233
Query: 197 YFSCSHSSSGHETLPPVLPSTQAPWDPFRFHVSQGPN-VMIMQPTQAVQEGEKSDQPLI 254
+ + +H+ + LP + P VSQG V ++QP+QA E QP +
Sbjct: 234 WVAFAHTGAWGMGLPAPQVPCETGALPQGVFVSQGARAVPVLQPSQAT-PAEVISQPAL 291
Score = 53.5 bits (127), Expect = 3e-07
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 13 KEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
KE W+ R S+ +L F+ D F A RE+LA+E G PES IQ+WF+N R +
Sbjct: 149 KEVWQKRTAVTGSRTYLLLRAFEKDRFTGIATREELARETGTPESRIQIWFQNRRAR 205
>gi|239758111 PREDICTED: similar to facioscapulohumeral muscular
dystrophy [Homo sapiens]
Length = 106
Score = 62.8 bits (151), Expect = 4e-10
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 98 LPKEA----RQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQ 153
LP EA R+K+ T +Q L FERNP+P IATR++LA+ G+ + R+Q+WF +
Sbjct: 11 LPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWFHNE 70
Query: 154 RSLYLKKSRME 164
RS YL++ + E
Sbjct: 71 RSRYLRQHQWE 81
Score = 53.1 bits (126), Expect = 3e-07
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 4 EGTSGGILQKEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWF 63
+GT Q R R+ + SQ + L++ F+ +P+P A RE+LA+ IG+P+ +Q+WF
Sbjct: 8 DGTLPAEAQGRGRRKRLLWTLSQSEALRACFERNPYPCIATRERLAQAIGIPQPRVQIWF 67
Query: 64 KNYR 67
N R
Sbjct: 68 HNER 71
>gi|239752588 PREDICTED: hypothetical protein XP_002348309, partial
[Homo sapiens]
Length = 327
Score = 62.0 bits (149), Expect = 8e-10
Identities = 68/246 (27%), Positives = 100/246 (40%), Gaps = 19/246 (7%)
Query: 104 QKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYLKKSRM 163
QK+T IT Q L++AFE++ FP IA R +LA +TGL ESRI +WFQ + + ++
Sbjct: 1 QKRTAITRPQTALLLRAFEKDHFPGIAARVQLARETGLPESRIHVWFQNHTARHPGQAGR 60
Query: 164 EPMNLLVDDPNERPDATVGWHPINLFLPTDSSHYFSCSHSSSGHETLP-PVLPSTQAPWD 222
P D A G HP + + +H+ + LP P +P T
Sbjct: 61 AP----AQDAGWCNAAHGGCHP--------APSCIAFAHTGAWGTGLPAPHVPCTPGSLP 108
Query: 223 PFRFHVSQGPN-VMIMQPTQAVQEGEKSDQPLIIPNHLLTLPILTKD-LDTP-TPFWLQY 279
F VSQG V ++QP+ A S + P L + L P P W
Sbjct: 109 QGAF-VSQGARAVPVLQPSGATPAEGISQPATAGGDFAYATPALPEGALSHPQAPRWPPN 167
Query: 280 QEEHQNHKEHSGSGVPQVKSHSQPEPEHR--EQQPLNLGQFDISNILQRWDEICQALLAE 337
+ Q ++ G+P + QP P Q + + W Q + A
Sbjct: 168 PGKSQEDRDWQRDGLPSPCAVGQPGPAQAGPNGQSVLAPHASQGSQWSAWGRGPQVVGAA 227
Query: 338 WDPLKG 343
W+P G
Sbjct: 228 WEPQAG 233
Score = 48.1 bits (113), Expect = 1e-05
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 17 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVK 69
+ R + Q +L F+ D FP AAR QLA+E G+PES I VWF+N+ +
Sbjct: 1 QKRTAITRPQTALLLRAFEKDHFPGIAARVQLARETGLPESRIHVWFQNHTAR 53
>gi|7706659 paired related homeobox 2 [Homo sapiens]
Length = 253
Score = 61.2 bits (147), Expect = 1e-09
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 12 QKEFWRNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQR 71
+K+ RNR +N SQ L+ F+ +PD RE+LA+ + + E+ +QVWF+N R K R
Sbjct: 101 KKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR 160
Query: 72 KLDYKCFSEKDQT--QGHDQSQHLTQEYLPKEARQKQTFITWT 112
+ + + + + + + Q + Q P+ +++WT
Sbjct: 161 RNERAMLASRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWT 203
Score = 55.5 bits (132), Expect = 7e-08
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 100 KEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRSLYLK 159
K+ R+ +T +Q L + FER +PD R++LA + L E+R+Q+WFQ +R+ + +
Sbjct: 102 KKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRR 161
Query: 160 KSR----MEPMNLLVDDPNERP-DATVGWHPINLFLPTDSSHYFSCSHSSSGHETLPPVL 214
R +LL E + V P L S Y S + +SS + T+PP
Sbjct: 162 NERAMLASRSASLLKSYSQEAAIEQPVAPRPTAL-----SPDYLSWT-ASSPYSTVPPYS 215
Query: 215 PSTQAPWDP 223
P + P P
Sbjct: 216 PGSSGPATP 224
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,096,490
Number of Sequences: 37866
Number of extensions: 751931
Number of successful extensions: 3028
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 2362
Number of HSP's gapped (non-prelim): 677
length of query: 345
length of database: 18,247,518
effective HSP length: 103
effective length of query: 242
effective length of database: 14,347,320
effective search space: 3472051440
effective search space used: 3472051440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.