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Search of human proteins with 239742590
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742590 PREDICTED: hypothetical protein XP_002342565 [Homo
sapiens]
(91 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239742590 PREDICTED: hypothetical protein XP_002342565 [Homo ... 198 7e-52
gi|239742582 PREDICTED: hypothetical protein XP_002342563 [Homo ... 198 7e-52
gi|239742588 PREDICTED: hypothetical protein XP_002342566 [Homo ... 196 3e-51
gi|239742578 PREDICTED: hypothetical protein XP_002342558 [Homo ... 196 3e-51
gi|239742576 PREDICTED: hypothetical protein XP_002342559 [Homo ... 196 3e-51
gi|239742574 PREDICTED: hypothetical protein XP_002342560 [Homo ... 196 3e-51
gi|239742572 PREDICTED: hypothetical protein XP_002342561 [Homo ... 196 3e-51
gi|239742562 PREDICTED: hypothetical protein XP_002342557 [Homo ... 196 3e-51
gi|239742558 PREDICTED: hypothetical protein XP_002342553 [Homo ... 196 3e-51
gi|239742907 PREDICTED: hypothetical protein XP_002342647 [Homo ... 194 1e-50
gi|239754136 PREDICTED: similar to PRED15 [Homo sapiens] 190 2e-49
gi|239742637 PREDICTED: hypothetical protein XP_002342585 [Homo ... 189 4e-49
gi|239742633 PREDICTED: hypothetical protein XP_002342584 [Homo ... 187 2e-48
gi|239753728 PREDICTED: similar to hCG1997218 [Homo sapiens] 82 9e-17
gi|239748245 PREDICTED: hypothetical protein XP_002346621 [Homo ... 82 9e-17
gi|239742146 PREDICTED: hypothetical protein XP_002342415 [Homo ... 82 9e-17
gi|157502184 kinesin family member 6 [Homo sapiens] 29 0.94
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens] 28 1.6
gi|31317305 M-phase phosphoprotein 10 [Homo sapiens] 27 3.6
gi|167860126 serine (or cysteine) proteinase inhibitor, clade B ... 27 3.6
gi|5454096 serine/threonine kinase 4 [Homo sapiens] 26 7.9
>gi|239742590 PREDICTED: hypothetical protein XP_002342565 [Homo
sapiens]
Length = 91
Score = 198 bits (504), Expect = 7e-52
Identities = 91/91 (100%), Positives = 91/91 (100%)
Query: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
Query: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742582 PREDICTED: hypothetical protein XP_002342563 [Homo
sapiens]
Length = 91
Score = 198 bits (504), Expect = 7e-52
Identities = 91/91 (100%), Positives = 91/91 (100%)
Query: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
Query: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742588 PREDICTED: hypothetical protein XP_002342566 [Homo
sapiens]
Length = 91
Score = 196 bits (498), Expect = 3e-51
Identities = 90/91 (98%), Positives = 90/91 (98%)
Query: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSE
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60
Query: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742578 PREDICTED: hypothetical protein XP_002342558 [Homo
sapiens]
Length = 91
Score = 196 bits (498), Expect = 3e-51
Identities = 90/91 (98%), Positives = 90/91 (98%)
Query: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSE
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60
Query: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742576 PREDICTED: hypothetical protein XP_002342559 [Homo
sapiens]
Length = 91
Score = 196 bits (498), Expect = 3e-51
Identities = 90/91 (98%), Positives = 90/91 (98%)
Query: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSE
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60
Query: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742574 PREDICTED: hypothetical protein XP_002342560 [Homo
sapiens]
Length = 91
Score = 196 bits (498), Expect = 3e-51
Identities = 90/91 (98%), Positives = 90/91 (98%)
Query: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSE
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60
Query: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742572 PREDICTED: hypothetical protein XP_002342561 [Homo
sapiens]
Length = 91
Score = 196 bits (498), Expect = 3e-51
Identities = 90/91 (98%), Positives = 90/91 (98%)
Query: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSE
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60
Query: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742562 PREDICTED: hypothetical protein XP_002342557 [Homo
sapiens]
Length = 91
Score = 196 bits (498), Expect = 3e-51
Identities = 90/91 (98%), Positives = 90/91 (98%)
Query: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSE
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60
Query: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742558 PREDICTED: hypothetical protein XP_002342553 [Homo
sapiens]
Length = 91
Score = 196 bits (498), Expect = 3e-51
Identities = 90/91 (98%), Positives = 90/91 (98%)
Query: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSE
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60
Query: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742907 PREDICTED: hypothetical protein XP_002342647 [Homo
sapiens]
Length = 91
Score = 194 bits (494), Expect = 1e-50
Identities = 89/91 (97%), Positives = 90/91 (98%)
Query: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDM+NKVQAEVVSEG
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMNNKVQAEVVSEG 60
Query: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWSKVTLTMQRHCRHC PVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCPPVLETGIR 91
>gi|239754136 PREDICTED: similar to PRED15 [Homo sapiens]
Length = 91
Score = 190 bits (483), Expect = 2e-49
Identities = 86/91 (94%), Positives = 90/91 (98%)
Query: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLNGFDQNV+SDMDNKVQAEVVS+G
Sbjct: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDG 60
Query: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWS+VTLT+QRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
>gi|239742637 PREDICTED: hypothetical protein XP_002342585 [Homo
sapiens]
Length = 91
Score = 189 bits (480), Expect = 4e-49
Identities = 86/91 (94%), Positives = 89/91 (97%)
Query: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLN FDQNV+SDMDNKVQAEVVS+G
Sbjct: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
Query: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWS+VTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
>gi|239742633 PREDICTED: hypothetical protein XP_002342584 [Homo
sapiens]
Length = 91
Score = 187 bits (475), Expect = 2e-48
Identities = 85/91 (93%), Positives = 89/91 (97%)
Query: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLNGFDQNV+SDMDNKVQAEVVS+
Sbjct: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
Query: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWS+VTLT+QRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
>gi|239753728 PREDICTED: similar to hCG1997218 [Homo sapiens]
Length = 171
Score = 82.0 bits (201), Expect = 9e-17
Identities = 36/45 (80%), Positives = 41/45 (91%)
Query: 26 MWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEGDEEFVGKWSK 70
MWESLE PRDLLNGFDQN ++DMDN++QAEVVS+GDEE VG WSK
Sbjct: 1 MWESLEPPRDLLNGFDQNADNDMDNEIQAEVVSDGDEELVGNWSK 45
>gi|239748245 PREDICTED: hypothetical protein XP_002346621 [Homo
sapiens]
Length = 171
Score = 82.0 bits (201), Expect = 9e-17
Identities = 36/45 (80%), Positives = 41/45 (91%)
Query: 26 MWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEGDEEFVGKWSK 70
MWESLE PRDLLNGFDQN ++DMDN++QAEVVS+GDEE VG WSK
Sbjct: 1 MWESLEPPRDLLNGFDQNADNDMDNEIQAEVVSDGDEELVGNWSK 45
>gi|239742146 PREDICTED: hypothetical protein XP_002342415 [Homo
sapiens]
Length = 171
Score = 82.0 bits (201), Expect = 9e-17
Identities = 36/45 (80%), Positives = 41/45 (91%)
Query: 26 MWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEGDEEFVGKWSK 70
MWESLE PRDLLNGFDQN ++DMDN++QAEVVS+GDEE VG WSK
Sbjct: 1 MWESLEPPRDLLNGFDQNADNDMDNEIQAEVVSDGDEELVGNWSK 45
>gi|157502184 kinesin family member 6 [Homo sapiens]
Length = 814
Score = 28.9 bits (63), Expect = 0.94
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 21 EEDRKMWESLE--LPRDLLNGFDQNVNSDMDNKVQAEVVSEGDEEFV 65
+ED K+ SLE LPRDL +GF N K Q + ++E V
Sbjct: 27 DEDEKLIPSLEIILPRDLADGFVNNKRESYKFKFQRIFDQDANQETV 73
>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
Length = 1053
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 44 VNSDMDNKVQAEVVSEGDEEFVGKW----SKVTLTMQRHCRHCAPVLET 88
+N +DN+ +V E D +F KW +++ +T + HC + ET
Sbjct: 426 LNGRLDNEFDRLIVPEPDVDFDAKWNELDARINVTEKNAEEHCFYIEET 474
>gi|31317305 M-phase phosphoprotein 10 [Homo sapiens]
Length = 681
Score = 26.9 bits (58), Expect = 3.6
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 22 EDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEGDEE 63
+D ++W+ LEL + + + QN S+ N ++ E +E+
Sbjct: 72 DDEQIWQQLELQNEPILQYFQNAVSETINDEDISLLPESEEQ 113
>gi|167860126 serine (or cysteine) proteinase inhibitor, clade B
(ovalbumin), member 5 [Homo sapiens]
Length = 375
Score = 26.9 bits (58), Expect = 3.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 34 RDLLNGFDQNVNSDMDNKVQAEVVSEGDEEFVGKWSK 70
+DL +G +N+ +D Q +++ FVGKW K
Sbjct: 137 KDLTDGHFENILADNSVNDQTKILVVNAAYFVGKWMK 173
>gi|5454096 serine/threonine kinase 4 [Homo sapiens]
Length = 487
Score = 25.8 bits (55), Expect = 7.9
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 37 LNGFDQNVNSDMDNKVQAEVVSEGDEEFVGKWSKVTLTMQRHCRHCAPVLETGI 90
+N F ++V + N ++ +GD EF+ W+ L Q+ P++E I
Sbjct: 408 INSFGKSVPGPLKNSSDWKIPQDGDYEFLKSWTVEDL--QKRLLALDPMMEQEI 459
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,798,191
Number of Sequences: 37866
Number of extensions: 139526
Number of successful extensions: 418
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 400
Number of HSP's gapped (non-prelim): 21
length of query: 91
length of database: 18,247,518
effective HSP length: 62
effective length of query: 29
effective length of database: 15,899,826
effective search space: 461094954
effective search space used: 461094954
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.